RNA–Protein interactions for RNA: ENST00000557154.5

SRSF5-217, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SRSF5, Length 1,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-217ENST00000557154 GNPATO15228 680 aa13.68□□□□□ -0.22
SRSF5-217ENST00000557154 ATP6V1AP38606 617 aa13.68□□□□□ -0.22
SRSF5-217ENST00000557154 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
SRSF5-217ENST00000557154 EIF4A2Q14240 407 aaKnown RBP13.67□□□□□ -0.22
SRSF5-217ENST00000557154 ATG3Q9NT62 314 aa13.67□□□□□ -0.22
SRSF5-217ENST00000557154 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
SRSF5-217ENST00000557154 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
SRSF5-217ENST00000557154 PXDNLA1KZ92 1463 aa13.65□□□□□ -0.22
SRSF5-217ENST00000557154 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
SRSF5-217ENST00000557154 MMP10P09238 476 aa13.64□□□□□ -0.23
SRSF5-217ENST00000557154 C10orf71Q711Q0 1435 aa13.64□□□□□ -0.23
SRSF5-217ENST00000557154 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
SRSF5-217ENST00000557154 HSP90AB1P08238 724 aaKnown RBP13.64□□□□□ -0.23
SRSF5-217ENST00000557154 ADRA2BP18089 450 aa13.64□□□□□ -0.23
SRSF5-217ENST00000557154 DCAF5Q96JK2 942 aa13.64□□□□□ -0.23
SRSF5-217ENST00000557154 WWC3Q9ULE0 1092 aa13.64□□□□□ -0.23
SRSF5-217ENST00000557154 RTCBQ9Y3I0 505 aaKnown RBP13.64□□□□□ -0.23
SRSF5-217ENST00000557154 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
SRSF5-217ENST00000557154 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
SRSF5-217ENST00000557154 ZNF526Q8TF50 670 aaPredicted RBP13.63□□□□□ -0.23
SRSF5-217ENST00000557154 SLC4A9Q96Q91 983 aa13.63□□□□□ -0.23
SRSF5-217ENST00000557154 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
SRSF5-217ENST00000557154 KDM6AO15550 1401 aaPredicted RBP13.62□□□□□ -0.23
SRSF5-217ENST00000557154 N4BP2Q86UW6 1770 aaPredicted RBP13.62□□□□□ -0.23
SRSF5-217ENST00000557154 HSPA6P17066 643 aa13.62□□□□□ -0.23
SRSF5-217ENST00000557154 TNNT2P45379 298 aaPredicted RBP13.62□□□□□ -0.23
SRSF5-217ENST00000557154 TGFB2P61812 414 aa13.62□□□□□ -0.23
SRSF5-217ENST00000557154 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
SRSF5-217ENST00000557154 RC3H1Q5TC82 1133 aaKnown RBP13.62□□□□□ -0.23
SRSF5-217ENST00000557154 BRCA1P38398 1863 aaKnown RBP13.62□□□□□ -0.23
SRSF5-217ENST00000557154 AMOTQ4VCS5 1084 aa13.6□□□□□ -0.23
SRSF5-217ENST00000557154 PLEKHO1Q53GL0 409 aaPredicted RBP13.6□□□□□ -0.23
SRSF5-217ENST00000557154 ARHGEF1Q92888 912 aaKnown RBP13.6□□□□□ -0.23
SRSF5-217ENST00000557154 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
SRSF5-217ENST00000557154 MYH14Q7Z406 1995 aaKnown RBP13.6□□□□□ -0.23
SRSF5-217ENST00000557154 KIF3CO14782 793 aa13.59□□□□□ -0.23
SRSF5-217ENST00000557154 IFFO2Q5TF58 517 aa13.59□□□□□ -0.23
SRSF5-217ENST00000557154 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
SRSF5-217ENST00000557154 RPS6KA4O75676 772 aa13.59□□□□□ -0.23
SRSF5-217ENST00000557154 GYS1P13807 737 aa13.59□□□□□ -0.23
SRSF5-217ENST00000557154 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
SRSF5-217ENST00000557154 RFC4P35249 363 aa13.58□□□□□ -0.24
SRSF5-217ENST00000557154 CABP4P57796 275 aa13.58□□□□□ -0.24
SRSF5-217ENST00000557154 PANK3Q9H999 370 aa13.58□□□□□ -0.24
SRSF5-217ENST00000557154 CCDC87Q9NVE4 849 aa13.58□□□□□ -0.24
SRSF5-217ENST00000557154 BCS1LQ9Y276 419 aa13.58□□□□□ -0.24
SRSF5-217ENST00000557154 ARFGEF1Q9Y6D6 1849 aa13.57□□□□□ -0.24
SRSF5-217ENST00000557154 TJP1Q07157 1748 aa13.57□□□□□ -0.24
SRSF5-217ENST00000557154 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
SRSF5-217ENST00000557154 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
SRSF5-217ENST00000557154 SCN11AQ9UI33 1791 aa13.57□□□□□ -0.24
SRSF5-217ENST00000557154 MTHFSP49914 203 aa13.56□□□□□ -0.24
SRSF5-217ENST00000557154 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
SRSF5-217ENST00000557154 PARP3Q9Y6F1 533 aa13.56□□□□□ -0.24
SRSF5-217ENST00000557154 DPEP1P16444 411 aa13.55□□□□□ -0.24
SRSF5-217ENST00000557154 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
SRSF5-217ENST00000557154 ADAMTS7Q9UKP4 1686 aa13.55□□□□□ -0.24
SRSF5-217ENST00000557154 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
SRSF5-217ENST00000557154 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
SRSF5-217ENST00000557154 CRKLP46109 303 aaKnown RBP13.54□□□□□ -0.24
SRSF5-217ENST00000557154 USP42Q9H9J4 1324 aaKnown RBP13.54□□□□□ -0.24
SRSF5-217ENST00000557154 TOMM70O94826 608 aa13.54□□□□□ -0.24
SRSF5-217ENST00000557154 KCNA3P22001 575 aa13.54□□□□□ -0.24
SRSF5-217ENST00000557154 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
SRSF5-217ENST00000557154 NFATC2IPQ8NCF5 419 aa13.54□□□□□ -0.24
SRSF5-217ENST00000557154 MRC1P22897 1456 aa13.53□□□□□ -0.24
SRSF5-217ENST00000557154 FCHSD2O94868 740 aa13.53□□□□□ -0.24
SRSF5-217ENST00000557154 SULT6B1Q6IMI4 303 aa13.53□□□□□ -0.24
SRSF5-217ENST00000557154 ARHGAP27Q6ZUM4 889 aa13.53□□□□□ -0.24
SRSF5-217ENST00000557154 IL13P35225 146 aa13.52□□□□□ -0.25
SRSF5-217ENST00000557154 APLP1P51693 650 aa13.52□□□□□ -0.25
SRSF5-217ENST00000557154 DDR1Q08345 913 aa13.51□□□□□ -0.25
SRSF5-217ENST00000557154 FKBP8Q14318 412 aa13.51□□□□□ -0.25
SRSF5-217ENST00000557154 PIM2Q9P1W9 311 aa13.51□□□□□ -0.25
SRSF5-217ENST00000557154 SRP68Q9UHB9 627 aaKnown RBP13.51□□□□□ -0.25
SRSF5-217ENST00000557154 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
SRSF5-217ENST00000557154 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
SRSF5-217ENST00000557154 NMRK2Q9NPI5 230 aa13.5□□□□□ -0.25
SRSF5-217ENST00000557154 KNSTRNQ9Y448 316 aa13.5□□□□□ -0.25
SRSF5-217ENST00000557154 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
SRSF5-217ENST00000557154 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
SRSF5-217ENST00000557154 SLC52A2Q9HAB3 445 aa13.49□□□□□ -0.25
SRSF5-217ENST00000557154 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
SRSF5-217ENST00000557154 DALRD3Q5D0E6 543 aaKnown RBP13.49□□□□□ -0.25
SRSF5-217ENST00000557154 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
SRSF5-217ENST00000557154 SBF1O95248 1867 aa13.48□□□□□ -0.25
SRSF5-217ENST00000557154 TNRC6CQ9HCJ0 1690 aaKnown RBP13.48□□□□□ -0.25
SRSF5-217ENST00000557154 WDR90Q96KV7 1748 aa13.48□□□□□ -0.25
SRSF5-217ENST00000557154 NRXN2Q9P2S2 1712 aa13.48□□□□□ -0.25
SRSF5-217ENST00000557154 TM4SF1P30408 202 aa13.48□□□□□ -0.25
SRSF5-217ENST00000557154 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
SRSF5-217ENST00000557154 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
SRSF5-217ENST00000557154 KCPQ6ZWJ8 1503 aa13.48□□□□□ -0.25
SRSF5-217ENST00000557154 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
SRSF5-217ENST00000557154 DLEC1Q9Y238 1755 aa13.47□□□□□ -0.25
SRSF5-217ENST00000557154 ZPR1O75312 459 aa13.47□□□□□ -0.25
SRSF5-217ENST00000557154 DNAJC10Q8IXB1 793 aa13.47□□□□□ -0.25
SRSF5-217ENST00000557154 DNAJC5GQ8N7S2 189 aa13.47□□□□□ -0.25
SRSF5-217ENST00000557154 UBR2Q8IWV8 1755 aa13.46□□□□□ -0.25
SRSF5-217ENST00000557154 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms