RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 RIPK4P57078 832 aa21.56■■□□□ 1.04
PCNX4-213ENST00000556907 TEFQ10587 303 aa21.56■■□□□ 1.04
PCNX4-213ENST00000556907 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
PCNX4-213ENST00000556907 NFATC2IPQ8NCF5 419 aa21.56■■□□□ 1.04
PCNX4-213ENST00000556907 CAMKK2Q96RR4 588 aa21.56■■□□□ 1.04
PCNX4-213ENST00000556907 MRC1P22897 1456 aa21.56■■□□□ 1.04
PCNX4-213ENST00000556907 EN1Q05925 392 aaPredicted RBP21.55■■□□□ 1.04
PCNX4-213ENST00000556907 DEFB132Q7Z7B7 95 aa21.55■■□□□ 1.04
PCNX4-213ENST00000556907 SLC27A3Q5K4L6 730 aa21.53■■□□□ 1.04
PCNX4-213ENST00000556907 NGEFQ8N5V2 710 aa21.53■■□□□ 1.04
PCNX4-213ENST00000556907 APAF1O14727 1248 aa21.52■■□□□ 1.04
PCNX4-213ENST00000556907 EZH2Q15910 746 aaKnown RBP21.51■■□□□ 1.03
PCNX4-213ENST00000556907 MCM10Q7L590 875 aa21.51■■□□□ 1.03
PCNX4-213ENST00000556907 PALLDQ8WX93 1383 aa21.5■■□□□ 1.03
PCNX4-213ENST00000556907 TXNRD1Q16881 649 aa21.5■■□□□ 1.03
PCNX4-213ENST00000556907 ATG3Q9NT62 314 aa21.5■■□□□ 1.03
PCNX4-213ENST00000556907 TAF7Q15545 349 aaPredicted RBP21.49■■□□□ 1.03
PCNX4-213ENST00000556907 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
PCNX4-213ENST00000556907 LY75O60449 1722 aa21.49■■□□□ 1.03
PCNX4-213ENST00000556907 NEUROD2Q15784 382 aa21.48■■□□□ 1.03
PCNX4-213ENST00000556907 CCDC27Q2M243 656 aa21.48■■□□□ 1.03
PCNX4-213ENST00000556907 BABAM1Q9NWV8 329 aa21.48■■□□□ 1.03
PCNX4-213ENST00000556907 SIPA1L3O60292 1781 aaPredicted RBP21.48■■□□□ 1.03
PCNX4-213ENST00000556907 CENPBP07199 599 aaPredicted RBP21.47■■□□□ 1.03
PCNX4-213ENST00000556907 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
PCNX4-213ENST00000556907 DCTN1Q14203 1278 aa21.47■■□□□ 1.03
PCNX4-213ENST00000556907 PROM2Q8N271 834 aa21.47■■□□□ 1.03
PCNX4-213ENST00000556907 RRP7AQ9Y3A4 280 aaKnown RBP21.47■■□□□ 1.03
PCNX4-213ENST00000556907 RREB1Q92766 1687 aa21.47■■□□□ 1.03
PCNX4-213ENST00000556907 BTBD11A6QL63 1104 aa21.46■■□□□ 1.03
PCNX4-213ENST00000556907 TTC5Q8N0Z6 440 aa21.46■■□□□ 1.03
PCNX4-213ENST00000556907 CCNL1Q9UK58 526 aaPredicted RBP21.46■■□□□ 1.03
PCNX4-213ENST00000556907 TRIM35Q9UPQ4 493 aa21.46■■□□□ 1.03
PCNX4-213ENST00000556907 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
PCNX4-213ENST00000556907 SIK1P57059 783 aa21.45■■□□□ 1.02
PCNX4-213ENST00000556907 NBPF14Q5TI25 921 aa21.45■■□□□ 1.02
PCNX4-213ENST00000556907 ZNF831Q5JPB2 1677 aa21.44■■□□□ 1.02
PCNX4-213ENST00000556907 ZNF790Q6PG37 636 aa21.44■■□□□ 1.02
PCNX4-213ENST00000556907 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
PCNX4-213ENST00000556907 ZNF521Q96K83 1311 aa21.43■■□□□ 1.02
PCNX4-213ENST00000556907 PAPPAQ13219 1627 aa21.43■■□□□ 1.02
PCNX4-213ENST00000556907 RBM42Q9BTD8 480 aaKnown RBP21.41■■□□□ 1.02
PCNX4-213ENST00000556907 NUP188Q5SRE5 1749 aa21.41■■□□□ 1.02
PCNX4-213ENST00000556907 ATP6V1AP38606 617 aa21.4■■□□□ 1.02
PCNX4-213ENST00000556907 SLC39A6Q13433 755 aa21.4■■□□□ 1.02
PCNX4-213ENST00000556907 FMNL2Q96PY5 1086 aa21.4■■□□□ 1.02
PCNX4-213ENST00000556907 THUMPD2Q9BTF0 503 aaKnown RBP21.4■■□□□ 1.02
PCNX4-213ENST00000556907 LRRC4BQ9NT99 713 aa21.4■■□□□ 1.02
PCNX4-213ENST00000556907 PTCD1O75127 700 aaKnown RBP21.39■■□□□ 1.01
PCNX4-213ENST00000556907 TEX13AQ9BXU3 409 aaPredicted RBP21.39■■□□□ 1.01
PCNX4-213ENST00000556907 UBR2Q8IWV8 1755 aa21.38■■□□□ 1.01
PCNX4-213ENST00000556907 WWC1Q8IX03 1113 aa21.38■■□□□ 1.01
PCNX4-213ENST00000556907 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
PCNX4-213ENST00000556907 CICQ96RK0 1608 aaPredicted RBP21.37■■□□□ 1.01
PCNX4-213ENST00000556907 WDR63Q8IWG1 891 aa21.37■■□□□ 1.01
PCNX4-213ENST00000556907 STK32BQ9NY57 414 aa21.37■■□□□ 1.01
PCNX4-213ENST00000556907 KCPQ6ZWJ8 1503 aa21.37■■□□□ 1.01
PCNX4-213ENST00000556907 IL16Q14005 1332 aa21.36■■□□□ 1.01
PCNX4-213ENST00000556907 SENP3-EIF4A1A0A087X0R7 540 aa21.36■■□□□ 1.01
PCNX4-213ENST00000556907 CHL1O00533 1208 aa21.36■■□□□ 1.01
PCNX4-213ENST00000556907 GNAI1P63096 354 aa21.36■■□□□ 1.01
PCNX4-213ENST00000556907 IFT57Q9NWB7 429 aa21.36■■□□□ 1.01
PCNX4-213ENST00000556907 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
PCNX4-213ENST00000556907 HEG1Q9ULI3 1381 aa21.36■■□□□ 1.01
PCNX4-213ENST00000556907 TAF1LQ8IZX4 1826 aa21.35■■□□□ 1.01
PCNX4-213ENST00000556907 ZNF496Q96IT1 587 aaPredicted RBP21.35■■□□□ 1.01
PCNX4-213ENST00000556907 SLC4A9Q96Q91 983 aa21.35■■□□□ 1.01
PCNX4-213ENST00000556907 C5P01031 1676 aa21.34■■□□□ 1.01
PCNX4-213ENST00000556907 KDM3BQ7LBC6 1761 aa21.34■■□□□ 1.01
PCNX4-213ENST00000556907 SLC15A2Q16348 729 aa21.34■■□□□ 1.01
PCNX4-213ENST00000556907 RC3H1Q5TC82 1133 aaKnown RBP21.34■■□□□ 1.01
PCNX4-213ENST00000556907 SNRPA1P09661 255 aaKnown RBP21.33■■□□□ 1.01
PCNX4-213ENST00000556907 ZNF853P0CG23 659 aa21.33■■□□□ 1.01
PCNX4-213ENST00000556907 ITPK1Q13572 414 aa21.33■■□□□ 1.01
PCNX4-213ENST00000556907 AKT1S1Q96B36 256 aa21.33■■□□□ 1.01
PCNX4-213ENST00000556907 MIS18AQ9NYP9 233 aa21.33■■□□□ 1.01
PCNX4-213ENST00000556907 SALL2Q9Y467 1007 aaPredicted RBP21.33■■□□□ 1.01
PCNX4-213ENST00000556907 KCNQ3O43525 872 aa21.32■■□□□ 1
PCNX4-213ENST00000556907 STARD3NLO95772 234 aa21.32■■□□□ 1
PCNX4-213ENST00000556907 KCNQ4P56696 695 aa21.32■■□□□ 1
PCNX4-213ENST00000556907 EIF4A1P60842 406 aaKnown RBP21.32■■□□□ 1
PCNX4-213ENST00000556907 CNTNAP4Q9C0A0 1308 aa21.31■■□□□ 1
PCNX4-213ENST00000556907 LINC00116Q8NCU8 138 aa21.31■■□□□ 1
PCNX4-213ENST00000556907 FLAD1Q8NFF5 587 aa21.31■■□□□ 1
PCNX4-213ENST00000556907 LAS1LQ9Y4W2 734 aaKnown RBP21.31■■□□□ 1
PCNX4-213ENST00000556907 C4BP0C0L5 1744 aa21.3■■□□□ 1
PCNX4-213ENST00000556907 AK7Q96M32 723 aa21.3■■□□□ 1
PCNX4-213ENST00000556907 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
PCNX4-213ENST00000556907 DNAJC10Q8IXB1 793 aa21.29■■□□□ 1
PCNX4-213ENST00000556907 ANO8Q9HCE9 1232 aaPredicted RBP21.29■■□□□ 1
PCNX4-213ENST00000556907 TFCP2L1Q9NZI6 479 aa21.29■■□□□ 1
PCNX4-213ENST00000556907 TJP1Q07157 1748 aa21.29■■□□□ 1
PCNX4-213ENST00000556907 GIGYF1O75420 1035 aaPredicted RBP21.28■■□□□ 1
PCNX4-213ENST00000556907 CYP19A1P11511 503 aaPredicted RBP21.28■■□□□ 1
PCNX4-213ENST00000556907 GOLGA2Q08379 1002 aa21.28■■□□□ 1
PCNX4-213ENST00000556907 QSER1Q2KHR3 1735 aa21.27■■□□□ 1
PCNX4-213ENST00000556907 ZNF827Q17R98 1081 aa21.27■■□□□ 1
PCNX4-213ENST00000556907 CHMP4AQ9BY43 222 aa21.27■■□□□ 1
PCNX4-213ENST00000556907 MBIPQ9NS73 344 aa21.27■■□□□ 1
PCNX4-213ENST00000556907 HOXB7P09629 217 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms