RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 PNPLA7Q6ZV29 1317 aa13.84□□□□□ -0.19
HNRNPC-225ENST00000556513 ERVV-2B6SEH9 535 aa13.84□□□□□ -0.19
HNRNPC-225ENST00000556513 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
HNRNPC-225ENST00000556513 ATG3Q9NT62 314 aa13.84□□□□□ -0.19
HNRNPC-225ENST00000556513 CABP4P57796 275 aa13.83□□□□□ -0.2
HNRNPC-225ENST00000556513 MTHFSDQ2M296 383 aaKnown RBP13.83□□□□□ -0.2
HNRNPC-225ENST00000556513 AKAP4Q5JQC9 854 aa13.83□□□□□ -0.2
HNRNPC-225ENST00000556513 LOC102724428A0A0B4J2F2 783 aa13.82□□□□□ -0.2
HNRNPC-225ENST00000556513 SIK1P57059 783 aa13.82□□□□□ -0.2
HNRNPC-225ENST00000556513 RALBP1Q15311 655 aa13.82□□□□□ -0.2
HNRNPC-225ENST00000556513 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
HNRNPC-225ENST00000556513 MTFR1LQ9H019 292 aa13.82□□□□□ -0.2
HNRNPC-225ENST00000556513 COL5A3P25940 1745 aaPredicted RBP13.82□□□□□ -0.2
HNRNPC-225ENST00000556513 PTGER2P43116 358 aa13.81□□□□□ -0.2
HNRNPC-225ENST00000556513 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
HNRNPC-225ENST00000556513 LGR6Q9HBX8 967 aa13.81□□□□□ -0.2
HNRNPC-225ENST00000556513 COL24A1Q17RW2 1714 aa13.81□□□□□ -0.2
HNRNPC-225ENST00000556513 ATP6V1AP38606 617 aa13.81□□□□□ -0.2
HNRNPC-225ENST00000556513 SMIM5Q71RC9 77 aa13.81□□□□□ -0.2
HNRNPC-225ENST00000556513 AK7Q96M32 723 aa13.81□□□□□ -0.2
HNRNPC-225ENST00000556513 ZNF831Q5JPB2 1677 aa13.81□□□□□ -0.2
HNRNPC-225ENST00000556513 ADAMTS7Q9UKP4 1686 aa13.81□□□□□ -0.2
HNRNPC-225ENST00000556513 MYH14Q7Z406 1995 aaKnown RBP13.8□□□□□ -0.2
HNRNPC-225ENST00000556513 U2AF1L5P0DN76 240 aaPredicted RBP13.8□□□□□ -0.2
HNRNPC-225ENST00000556513 U2AF1Q01081 240 aaKnown RBP eCLIP13.8□□□□□ -0.26e-11■■□□□ 14.2
HNRNPC-225ENST00000556513 ITPK1Q13572 414 aa13.8□□□□□ -0.2
HNRNPC-225ENST00000556513 LINC00116Q8NCU8 138 aa13.8□□□□□ -0.2
HNRNPC-225ENST00000556513 NUDCQ9Y266 331 aa13.8□□□□□ -0.2
HNRNPC-225ENST00000556513 DLG5Q8TDM6 1919 aa13.79□□□□□ -0.2
HNRNPC-225ENST00000556513 PHF14O94880 888 aa13.79□□□□□ -0.2
HNRNPC-225ENST00000556513 PRKAR2BP31323 418 aa13.79□□□□□ -0.2
HNRNPC-225ENST00000556513 COL23A1Q86Y22 540 aaPredicted RBP13.79□□□□□ -0.2
HNRNPC-225ENST00000556513 SIPA1L3O60292 1781 aaPredicted RBP13.79□□□□□ -0.2
HNRNPC-225ENST00000556513 TJP1Q07157 1748 aa13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 GOLGB1Q14789 3259 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 RNMTO43148 476 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 PTCD1O75127 700 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 AMIGO3Q86WK7 504 aa13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 PHACTR3Q96KR7 559 aa13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 SLC4A9Q96Q91 983 aa13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 SGIP1Q9BQI5 828 aa13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 RSPH6AQ9H0K4 717 aa13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 PRKRIP1Q9H875 184 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-225ENST00000556513 MRC1P22897 1456 aa13.77□□□□□ -0.2
HNRNPC-225ENST00000556513 UTRNP46939 3433 aa13.77□□□□□ -0.2
HNRNPC-225ENST00000556513 MSL1Q68DK7 614 aa13.77□□□□□ -0.21
HNRNPC-225ENST00000556513 SLC16A10Q8TF71 515 aa13.77□□□□□ -0.21
HNRNPC-225ENST00000556513 SLC52A2Q9HAB3 445 aa13.77□□□□□ -0.21
HNRNPC-225ENST00000556513 MAP3K5Q99683 1374 aa13.76□□□□□ -0.21
HNRNPC-225ENST00000556513 GNPATO15228 680 aa13.76□□□□□ -0.21
HNRNPC-225ENST00000556513 HMGB2P26583 209 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-225ENST00000556513 GAS2L2Q8NHY3 880 aa13.76□□□□□ -0.21
HNRNPC-225ENST00000556513 ARXQ96QS3 562 aa13.76□□□□□ -0.21
HNRNPC-225ENST00000556513 UBR2Q8IWV8 1755 aa13.76□□□□□ -0.21
HNRNPC-225ENST00000556513 GNAT3A8MTJ3 354 aa13.75□□□□□ -0.21
HNRNPC-225ENST00000556513 SLC39A6Q13433 755 aa13.75□□□□□ -0.21
HNRNPC-225ENST00000556513 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
HNRNPC-225ENST00000556513 FHDC1Q9C0D6 1143 aaPredicted RBP13.75□□□□□ -0.21
HNRNPC-225ENST00000556513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-225ENST00000556513 FCHSD2O94868 740 aa13.74□□□□□ -0.21
HNRNPC-225ENST00000556513 POLD1P28340 1107 aa13.74□□□□□ -0.21
HNRNPC-225ENST00000556513 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
HNRNPC-225ENST00000556513 FLAD1Q8NFF5 587 aa13.74□□□□□ -0.21
HNRNPC-225ENST00000556513 C4AP0C0L4 1744 aa13.74□□□□□ -0.21
HNRNPC-225ENST00000556513 MYBBP1AQ9BQG0 1328 aaKnown RBP13.74□□□□□ -0.21
HNRNPC-225ENST00000556513 CICQ96RK0 1608 aaPredicted RBP13.74□□□□□ -0.21
HNRNPC-225ENST00000556513 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
HNRNPC-225ENST00000556513 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
HNRNPC-225ENST00000556513 KCPQ6ZWJ8 1503 aa13.73□□□□□ -0.21
HNRNPC-225ENST00000556513 SSFA2P28290 1259 aa13.73□□□□□ -0.21
HNRNPC-225ENST00000556513 TEFQ10587 303 aa13.73□□□□□ -0.21
HNRNPC-225ENST00000556513 SYT17Q9BSW7 474 aa13.72□□□□□ -0.21
HNRNPC-225ENST00000556513 RTCBQ9Y3I0 505 aaKnown RBP13.71□□□□□ -0.22
HNRNPC-225ENST00000556513 CRKLP46109 303 aaKnown RBP13.7□□□□□ -0.22
HNRNPC-225ENST00000556513 MCM10Q7L590 875 aa13.7□□□□□ -0.22
HNRNPC-225ENST00000556513 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
HNRNPC-225ENST00000556513 CNTNAP4Q9C0A0 1308 aa13.7□□□□□ -0.22
HNRNPC-225ENST00000556513 NEFMP07197 916 aa13.69□□□□□ -0.22
HNRNPC-225ENST00000556513 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
HNRNPC-225ENST00000556513 TRAPPC3LQ5T215 181 aa13.69□□□□□ -0.22
HNRNPC-225ENST00000556513 RC3H1Q5TC82 1133 aaKnown RBP13.69□□□□□ -0.22
HNRNPC-225ENST00000556513 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
HNRNPC-225ENST00000556513 RTF1Q92541 710 aaKnown RBP13.69□□□□□ -0.22
HNRNPC-225ENST00000556513 CEMIPQ8WUJ3 1361 aa13.68□□□□□ -0.22
HNRNPC-225ENST00000556513 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
HNRNPC-225ENST00000556513 RPS6KA4O75676 772 aa13.67□□□□□ -0.22
HNRNPC-225ENST00000556513 ARHGEF1Q92888 912 aaKnown RBP13.67□□□□□ -0.22
HNRNPC-225ENST00000556513 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
HNRNPC-225ENST00000556513 BTBD11A6QL63 1104 aa13.66□□□□□ -0.22
HNRNPC-225ENST00000556513 RFC4P35249 363 aa13.66□□□□□ -0.22
HNRNPC-225ENST00000556513 INTS5Q6P9B9 1019 aaKnown RBP13.66□□□□□ -0.22
HNRNPC-225ENST00000556513 ZNF790Q6PG37 636 aa13.66□□□□□ -0.22
HNRNPC-225ENST00000556513 NLGN2Q8NFZ4 835 aa13.66□□□□□ -0.22
HNRNPC-225ENST00000556513 ZNF496Q96IT1 587 aaPredicted RBP13.66□□□□□ -0.22
HNRNPC-225ENST00000556513 PLEKHF1Q96S99 279 aa13.66□□□□□ -0.22
HNRNPC-225ENST00000556513 MAPK8IP3Q9UPT6 1336 aa13.66□□□□□ -0.22
HNRNPC-225ENST00000556513 CHD4Q14839 1912 aa13.65□□□□□ -0.22
HNRNPC-225ENST00000556513 KCNQ3O43525 872 aa13.65□□□□□ -0.22
HNRNPC-225ENST00000556513 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-225ENST00000556513 CYP19A1P11511 503 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms