RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 POLKQ9UBT6 870 aa21.32■■□□□ 1
SUPT16H-205ENST00000556217 ASAP1Q9ULH1 1129 aa21.32■■□□□ 1
SUPT16H-205ENST00000556217 TOMM70O94826 608 aa21.3■■□□□ 1
SUPT16H-205ENST00000556217 SMIM5Q71RC9 77 aa21.3■■□□□ 1
SUPT16H-205ENST00000556217 WWC3Q9ULE0 1092 aa21.3■■□□□ 1
SUPT16H-205ENST00000556217 ITPK1Q13572 414 aa21.29■■□□□ 1
SUPT16H-205ENST00000556217 EIF4A2Q14240 407 aaKnown RBP21.28■■□□□ 1
SUPT16H-205ENST00000556217 POLR3GLQ9BT43 218 aa21.28■■□□□ 1
SUPT16H-205ENST00000556217 ATG3Q9NT62 314 aa21.28■■□□□ 1
SUPT16H-205ENST00000556217 TNNT2P45379 298 aaPredicted RBP21.27■■□□□ 1
SUPT16H-205ENST00000556217 ZNF831Q5JPB2 1677 aa21.26■□□□□ 0.99
SUPT16H-205ENST00000556217 HSP90AB1P08238 724 aaKnown RBP21.26■□□□□ 0.99
SUPT16H-205ENST00000556217 ERVV-2B6SEH9 535 aa21.25■□□□□ 0.99
SUPT16H-205ENST00000556217 MMP10P09238 476 aa21.25■□□□□ 0.99
SUPT16H-205ENST00000556217 TRAPPC3LQ5T215 181 aa21.25■□□□□ 0.99
SUPT16H-205ENST00000556217 RTCBQ9Y3I0 505 aaKnown RBP21.25■□□□□ 0.99
SUPT16H-205ENST00000556217 KIF13BQ9NQT8 1826 aa21.25■□□□□ 0.99
SUPT16H-205ENST00000556217 DCAF5Q96JK2 942 aa21.24■□□□□ 0.99
SUPT16H-205ENST00000556217 KDRP35968 1356 aa21.23■□□□□ 0.99
SUPT16H-205ENST00000556217 PLEKHO1Q53GL0 409 aaPredicted RBP21.23■□□□□ 0.99
SUPT16H-205ENST00000556217 NLGN1Q8N2Q7 840 aa21.23■□□□□ 0.99
SUPT16H-205ENST00000556217 COL5A3P25940 1745 aaPredicted RBP21.22■□□□□ 0.99
SUPT16H-205ENST00000556217 ADRA2BP18089 450 aa21.22■□□□□ 0.99
SUPT16H-205ENST00000556217 RBM42Q9BTD8 480 aaKnown RBP21.22■□□□□ 0.99
SUPT16H-205ENST00000556217 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
SUPT16H-205ENST00000556217 CICQ96RK0 1608 aaPredicted RBP21.22■□□□□ 0.99
SUPT16H-205ENST00000556217 TGFB2P61812 414 aa21.21■□□□□ 0.99
SUPT16H-205ENST00000556217 RC3H1Q5TC82 1133 aaKnown RBP21.21■□□□□ 0.99
SUPT16H-205ENST00000556217 AMOTQ4VCS5 1084 aa21.2■□□□□ 0.98
SUPT16H-205ENST00000556217 COL13A1Q5TAT6 717 aaPredicted RBP21.2■□□□□ 0.98
SUPT16H-205ENST00000556217 N4BP2Q86UW6 1770 aaPredicted RBP21.2■□□□□ 0.98
SUPT16H-205ENST00000556217 PXDNLA1KZ92 1463 aa21.2■□□□□ 0.98
SUPT16H-205ENST00000556217 CABP4P57796 275 aa21.19■□□□□ 0.98
SUPT16H-205ENST00000556217 ZNF530Q6P9A1 599 aaPredicted RBP21.19■□□□□ 0.98
SUPT16H-205ENST00000556217 KLRG1Q96E93 195 aa21.19■□□□□ 0.98
SUPT16H-205ENST00000556217 CNTNAP4Q9C0A0 1308 aa21.19■□□□□ 0.98
SUPT16H-205ENST00000556217 CAPN15O75808 1086 aa21.18■□□□□ 0.98
SUPT16H-205ENST00000556217 RFC4P35249 363 aa21.18■□□□□ 0.98
SUPT16H-205ENST00000556217 RBM46Q8TBY0 533 aaKnown RBP21.18■□□□□ 0.98
SUPT16H-205ENST00000556217 KIAA1551Q9HCM1 1747 aa21.18■□□□□ 0.98
SUPT16H-205ENST00000556217 EIF4G2P78344 907 aaKnown RBP eCLIP21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 C16orf71Q8IYS4 520 aaPredicted RBP21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 JMYQ8N9B5 988 aa21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 ARHGEF1Q92888 912 aaKnown RBP21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 SLC4A9Q96Q91 983 aa21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 PANK3Q9H999 370 aa21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 NMRK2Q9NPI5 230 aa21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 CCDC87Q9NVE4 849 aa21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 C10orf71Q711Q0 1435 aa21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 C4AP0C0L4 1744 aa21.17■□□□□ 0.98
SUPT16H-205ENST00000556217 WDR90Q96KV7 1748 aa21.16■□□□□ 0.98
SUPT16H-205ENST00000556217 RPS6KA4O75676 772 aa21.16■□□□□ 0.98
SUPT16H-205ENST00000556217 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
SUPT16H-205ENST00000556217 ARHGAP27Q6ZUM4 889 aa21.16■□□□□ 0.98
SUPT16H-205ENST00000556217 BCS1LQ9Y276 419 aa21.16■□□□□ 0.98
SUPT16H-205ENST00000556217 PARP3Q9Y6F1 533 aa21.16■□□□□ 0.98
SUPT16H-205ENST00000556217 KDM6AO15550 1401 aaPredicted RBP21.15■□□□□ 0.98
SUPT16H-205ENST00000556217 MTHFSP49914 203 aa21.15■□□□□ 0.98
SUPT16H-205ENST00000556217 TNS4Q8IZW8 715 aa21.15■□□□□ 0.98
SUPT16H-205ENST00000556217 MYH14Q7Z406 1995 aaKnown RBP21.15■□□□□ 0.98
SUPT16H-205ENST00000556217 A0A0G2JLW4 131 aa21.14■□□□□ 0.97
SUPT16H-205ENST00000556217 GYS1P13807 737 aa21.14■□□□□ 0.97
SUPT16H-205ENST00000556217 FSTL1Q12841 308 aa21.14■□□□□ 0.97
SUPT16H-205ENST00000556217 MORC1Q86VD1 984 aa21.14■□□□□ 0.97
SUPT16H-205ENST00000556217 PRELPP51888 382 aa21.13■□□□□ 0.97
SUPT16H-205ENST00000556217 BRCA1P38398 1863 aaKnown RBP21.12■□□□□ 0.97
SUPT16H-205ENST00000556217 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
SUPT16H-205ENST00000556217 PTCD1O75127 700 aaKnown RBP21.11■□□□□ 0.97
SUPT16H-205ENST00000556217 HSPA5P11021 654 aaKnown RBP21.11■□□□□ 0.97
SUPT16H-205ENST00000556217 HTRA3P83110 453 aa21.11■□□□□ 0.97
SUPT16H-205ENST00000556217 FCHSD2O94868 740 aa21.1■□□□□ 0.97
SUPT16H-205ENST00000556217 DPEP1P16444 411 aa21.1■□□□□ 0.97
SUPT16H-205ENST00000556217 AEBP1Q8IUX7 1158 aa21.1■□□□□ 0.97
SUPT16H-205ENST00000556217 NFATC2IPQ8NCF5 419 aa21.1■□□□□ 0.97
SUPT16H-205ENST00000556217 ARFGEF1Q9Y6D6 1849 aa21.1■□□□□ 0.97
SUPT16H-205ENST00000556217 CRKLP46109 303 aaKnown RBP21.09■□□□□ 0.97
SUPT16H-205ENST00000556217 SULT6B1Q6IMI4 303 aa21.09■□□□□ 0.97
SUPT16H-205ENST00000556217 SCN11AQ9UI33 1791 aa21.09■□□□□ 0.97
SUPT16H-205ENST00000556217 PCNTO95613 3336 aa21.08■□□□□ 0.97
SUPT16H-205ENST00000556217 C9orf131Q5VYM1 1079 aa21.08■□□□□ 0.97
SUPT16H-205ENST00000556217 KNSTRNQ9Y448 316 aa21.08■□□□□ 0.97
SUPT16H-205ENST00000556217 TJP1Q07157 1748 aa21.07■□□□□ 0.96
SUPT16H-205ENST00000556217 KDM2BQ8NHM5 1336 aa21.06■□□□□ 0.96
SUPT16H-205ENST00000556217 PIM2Q9P1W9 311 aa21.06■□□□□ 0.96
SUPT16H-205ENST00000556217 USP42Q9H9J4 1324 aaKnown RBP21.05■□□□□ 0.96
SUPT16H-205ENST00000556217 SRP68Q9UHB9 627 aaKnown RBP21.04■□□□□ 0.96
SUPT16H-205ENST00000556217 KCNA3P22001 575 aa21.03■□□□□ 0.96
SUPT16H-205ENST00000556217 IL13P35225 146 aa21.03■□□□□ 0.96
SUPT16H-205ENST00000556217 FKBP8Q14318 412 aa21.03■□□□□ 0.96
SUPT16H-205ENST00000556217 DALRD3Q5D0E6 543 aaKnown RBP21.03■□□□□ 0.96
SUPT16H-205ENST00000556217 AKAP4Q5JQC9 854 aa21.03■□□□□ 0.96
SUPT16H-205ENST00000556217 ZPR1O75312 459 aa21.02■□□□□ 0.96
SUPT16H-205ENST00000556217 VIRMAQ69YN4 1812 aaKnown RBP21.01■□□□□ 0.95
SUPT16H-205ENST00000556217 INTS5Q6P9B9 1019 aaKnown RBP21.01■□□□□ 0.95
SUPT16H-205ENST00000556217 SLC52A2Q9HAB3 445 aa21.01■□□□□ 0.95
SUPT16H-205ENST00000556217 RRAGCQ9HB90 399 aa21.01■□□□□ 0.95
SUPT16H-205ENST00000556217 DDR1Q08345 913 aa21■□□□□ 0.95
SUPT16H-205ENST00000556217 SMC1BQ8NDV3 1235 aa21■□□□□ 0.95
SUPT16H-205ENST00000556217 ADAMTS7Q9UKP4 1686 aa20.99■□□□□ 0.95
SUPT16H-205ENST00000556217 KCPQ6ZWJ8 1503 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms