RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 A0A1W2PRU2 124 aa6.19□□□□□ -1.42
SRP54-209ENST00000555746 FAM187AA6NFU0 413 aa6.19□□□□□ -1.42
SRP54-209ENST00000555746 SSFA2P28290 1259 aa6.19□□□□□ -1.42
SRP54-209ENST00000555746 LAPTM4AQ15012 233 aa6.19□□□□□ -1.42
SRP54-209ENST00000555746 OCLNQ16625 522 aa6.19□□□□□ -1.42
SRP54-209ENST00000555746 CTC1Q2NKJ3 1217 aa6.19□□□□□ -1.42
SRP54-209ENST00000555746 TSEN2Q8NCE0 465 aaKnown RBP6.19□□□□□ -1.42
SRP54-209ENST00000555746 C1orf216Q8TAB5 229 aa6.19□□□□□ -1.42
SRP54-209ENST00000555746 TSEN34Q9BSV6 310 aaKnown RBP6.19□□□□□ -1.42
SRP54-209ENST00000555746 RAB6BQ9NRW1 208 aa6.19□□□□□ -1.42
SRP54-209ENST00000555746 A6NJY4 79 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 SPINT1O43278 529 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 GFRA3O60609 400 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 WEE1P30291 646 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 SMTNP53814 917 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 FOXK2Q01167 660 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 KCNA1Q09470 495 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 PHLDB3Q6NSJ2 640 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 CRIPAKQ8N1N5 446 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 GAS2L2Q8NHY3 880 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 CNKSR1Q969H4 720 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 AGBL1Q96MI9 1066 aa6.18□□□□□ -1.42
SRP54-209ENST00000555746 PATL2C9JE40 543 aaKnown RBP6.17□□□□□ -1.42
SRP54-209ENST00000555746 IGFBP4P22692 258 aa6.17□□□□□ -1.42
SRP54-209ENST00000555746 ATP2B4P23634 1241 aa6.17□□□□□ -1.42
SRP54-209ENST00000555746 GPC1P35052 558 aa6.17□□□□□ -1.42
SRP54-209ENST00000555746 RELBQ01201 579 aa6.17□□□□□ -1.42
SRP54-209ENST00000555746 LINC00528Q8N1L1 170 aa6.17□□□□□ -1.42
SRP54-209ENST00000555746 HINFPQ9BQA5 517 aa6.17□□□□□ -1.42
SRP54-209ENST00000555746 FHDC1Q9C0D6 1143 aaPredicted RBP6.17□□□□□ -1.42
SRP54-209ENST00000555746 CXXC1Q9P0U4 656 aaPredicted RBP6.17□□□□□ -1.42
SRP54-209ENST00000555746 SCHIP1Q9P0W5 487 aaPredicted RBP6.17□□□□□ -1.42
SRP54-209ENST00000555746 SERTAD1Q9UHV2 236 aa6.17□□□□□ -1.42
SRP54-209ENST00000555746 PKDCCQ504Y2 493 aa6.16□□□□□ -1.42
SRP54-209ENST00000555746 TAS1R3Q7RTX0 852 aa6.16□□□□□ -1.42
SRP54-209ENST00000555746 TNS4Q8IZW8 715 aa6.16□□□□□ -1.42
SRP54-209ENST00000555746 IQSEC3Q9UPP2 1182 aaPredicted RBP6.16□□□□□ -1.42
SRP54-209ENST00000555746 CDK2AP1O14519 115 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 FOXO3O43524 673 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 C21orf2O43822 256 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 PRMT3O60678 531 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 RNF144AP50876 292 aaPredicted RBP6.15□□□□□ -1.42
SRP54-209ENST00000555746 CENPCQ03188 943 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 TLR1Q15399 786 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 MRPL14Q6P1L8 145 aaKnown RBP6.15□□□□□ -1.42
SRP54-209ENST00000555746 POTEAQ6S8J7 498 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 STAG2Q8N3U4 1231 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 NLRP3Q96P20 1036 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 GRIP2Q9C0E4 1043 aa6.15□□□□□ -1.42
SRP54-209ENST00000555746 ZNF395Q9H8N7 513 aaPredicted RBP6.15□□□□□ -1.42
SRP54-209ENST00000555746 GNEQ9Y223 722 aaKnown RBP6.15□□□□□ -1.42
SRP54-209ENST00000555746 ATAD2Q6PL18 1390 aa6.15□□□□□ -1.43
SRP54-209ENST00000555746 MEN1O00255 615 aa6.14□□□□□ -1.43
SRP54-209ENST00000555746 UPP2O95045 317 aa6.14□□□□□ -1.43
SRP54-209ENST00000555746 TXNDC2Q86VQ3 553 aa6.14□□□□□ -1.43
SRP54-209ENST00000555746 PPARGC1BQ86YN6 1023 aaKnown RBP6.14□□□□□ -1.43
SRP54-209ENST00000555746 ZNF295-AS1Q8N0V1 137 aa6.14□□□□□ -1.43
SRP54-209ENST00000555746 NBPF15Q8N660 670 aa6.14□□□□□ -1.43
SRP54-209ENST00000555746 COL26A1Q96A83 441 aa6.14□□□□□ -1.43
SRP54-209ENST00000555746 PRIMPOLQ96LW4 560 aa6.14□□□□□ -1.43
SRP54-209ENST00000555746 TSPAN10Q9H1Z9 355 aaPredicted RBP6.14□□□□□ -1.43
SRP54-209ENST00000555746 AXIN1O15169 862 aa6.13□□□□□ -1.43
SRP54-209ENST00000555746 ARID4AP29374 1257 aaPredicted RBP6.13□□□□□ -1.43
SRP54-209ENST00000555746 TRIM26Q12899 539 aaPredicted RBP6.13□□□□□ -1.43
SRP54-209ENST00000555746 FKBP5Q13451 457 aaPredicted RBP6.13□□□□□ -1.43
SRP54-209ENST00000555746 FOXD4L5Q5VV16 416 aaPredicted RBP6.13□□□□□ -1.43
SRP54-209ENST00000555746 TRIM46Q7Z4K8 759 aa6.13□□□□□ -1.43
SRP54-209ENST00000555746 AEBP1Q8IUX7 1158 aa6.13□□□□□ -1.43
SRP54-209ENST00000555746 SLC9A9Q8IVB4 645 aa6.13□□□□□ -1.43
SRP54-209ENST00000555746 SCG3Q8WXD2 468 aaKnown RBP6.13□□□□□ -1.43
SRP54-209ENST00000555746 ZSCAN10Q96SZ4 725 aaPredicted RBP6.13□□□□□ -1.43
SRP54-209ENST00000555746 INSM2Q96T92 566 aaPredicted RBP6.13□□□□□ -1.43
SRP54-209ENST00000555746 USP3Q9Y6I4 520 aa6.13□□□□□ -1.43
SRP54-209ENST00000555746 ZBTB7CA1YPR0 619 aa6.12□□□□□ -1.43
SRP54-209ENST00000555746 SPATA31C2B4DYI2 1134 aa6.12□□□□□ -1.43
SRP54-209ENST00000555746 LGR5O75473 907 aa6.12□□□□□ -1.43
SRP54-209ENST00000555746 CTSOP43234 321 aaPredicted RBP6.12□□□□□ -1.43
SRP54-209ENST00000555746 PSMA6P60900 246 aaKnown RBP6.12□□□□□ -1.43
SRP54-209ENST00000555746 SCARF1Q14162 830 aa6.12□□□□□ -1.43
SRP54-209ENST00000555746 RHBDD1Q8TEB9 315 aa6.12□□□□□ -1.43
SRP54-209ENST00000555746 C2orf49Q9BVC5 232 aaPredicted RBP6.12□□□□□ -1.43
SRP54-209ENST00000555746 AAASQ9NRG9 546 aa6.12□□□□□ -1.43
SRP54-209ENST00000555746 PPP1R12BO60237 982 aaPredicted RBP6.11□□□□□ -1.43
SRP54-209ENST00000555746 PTCD1O75127 700 aaKnown RBP6.11□□□□□ -1.43
SRP54-209ENST00000555746 BMP2P12643 396 aa6.11□□□□□ -1.43
SRP54-209ENST00000555746 HIRAP54198 1017 aaPredicted RBP6.11□□□□□ -1.43
SRP54-209ENST00000555746 TEAD4Q15561 434 aa6.11□□□□□ -1.43
SRP54-209ENST00000555746 PURBQ96QR8 312 aaKnown RBP6.11□□□□□ -1.43
SRP54-209ENST00000555746 IRX2Q9BZI1 471 aaPredicted RBP6.11□□□□□ -1.43
SRP54-209ENST00000555746 POLMQ9NP87 494 aaPredicted RBP6.11□□□□□ -1.43
SRP54-209ENST00000555746 SOS2Q07890 1332 aaPredicted RBP6.1□□□□□ -1.43
SRP54-209ENST00000555746 EML1O00423 815 aa6.1□□□□□ -1.43
SRP54-209ENST00000555746 BMP1P13497 986 aa6.1□□□□□ -1.43
SRP54-209ENST00000555746 WDR44Q5JSH3 913 aa6.1□□□□□ -1.43
SRP54-209ENST00000555746 SLC27A3Q5K4L6 730 aa6.1□□□□□ -1.43
SRP54-209ENST00000555746 C6orf118Q5T5N4 469 aa6.1□□□□□ -1.43
SRP54-209ENST00000555746 RNF217Q8TC41 542 aa6.1□□□□□ -1.43
SRP54-209ENST00000555746 CCER1Q8TC90 406 aaPredicted RBP6.1□□□□□ -1.43
SRP54-209ENST00000555746 ZDHHC1Q8WTX9 485 aa6.1□□□□□ -1.43
SRP54-209ENST00000555746 MTMR7Q9Y216 660 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms