RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 SLC4A9Q96Q91 983 aa13.36□□□□□ -0.27
HNRNPC-216ENST00000555137 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
HNRNPC-216ENST00000555137 ZNF526Q8TF50 670 aaPredicted RBP13.35□□□□□ -0.27
HNRNPC-216ENST00000555137 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
HNRNPC-216ENST00000555137 POLR3GLQ9BT43 218 aa13.34□□□□□ -0.27
HNRNPC-216ENST00000555137 GPBP1L1Q9HC44 474 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-216ENST00000555137 CICQ96RK0 1608 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-216ENST00000555137 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
HNRNPC-216ENST00000555137 COL5A3P25940 1745 aaPredicted RBP13.33□□□□□ -0.27
HNRNPC-216ENST00000555137 KDM6AO15550 1401 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-216ENST00000555137 MMP10P09238 476 aa13.33□□□□□ -0.28
HNRNPC-216ENST00000555137 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
HNRNPC-216ENST00000555137 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-216ENST00000555137 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
HNRNPC-216ENST00000555137 MYH14Q7Z406 1995 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-216ENST00000555137 C10orf71Q711Q0 1435 aa13.3□□□□□ -0.28
HNRNPC-216ENST00000555137 C4AP0C0L4 1744 aa13.3□□□□□ -0.28
HNRNPC-216ENST00000555137 AEBP1Q8IUX7 1158 aa13.3□□□□□ -0.28
HNRNPC-216ENST00000555137 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-216ENST00000555137 TIMELESSQ9UNS1 1208 aa13.3□□□□□ -0.28
HNRNPC-216ENST00000555137 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
HNRNPC-216ENST00000555137 ZNF530Q6P9A1 599 aaPredicted RBP13.29□□□□□ -0.28
HNRNPC-216ENST00000555137 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-216ENST00000555137 DCAF5Q96JK2 942 aa13.29□□□□□ -0.28
HNRNPC-216ENST00000555137 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
HNRNPC-216ENST00000555137 RTCBQ9Y3I0 505 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-216ENST00000555137 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
HNRNPC-216ENST00000555137 BRCA1P38398 1863 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-216ENST00000555137 A0A0G2JLW4 131 aa13.28□□□□□ -0.28
HNRNPC-216ENST00000555137 KIF3CO14782 793 aa13.28□□□□□ -0.28
HNRNPC-216ENST00000555137 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-216ENST00000555137 GYS1P13807 737 aa13.28□□□□□ -0.28
HNRNPC-216ENST00000555137 HSPA6P17066 643 aa13.28□□□□□ -0.28
HNRNPC-216ENST00000555137 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
HNRNPC-216ENST00000555137 PANK3Q9H999 370 aa13.28□□□□□ -0.28
HNRNPC-216ENST00000555137 TJP1Q07157 1748 aa13.27□□□□□ -0.28
HNRNPC-216ENST00000555137 RC3H1Q5TC82 1133 aaKnown RBP13.27□□□□□ -0.29
HNRNPC-216ENST00000555137 RPS6KA4O75676 772 aa13.26□□□□□ -0.29
HNRNPC-216ENST00000555137 HSP90AB1P08238 724 aaKnown RBP13.26□□□□□ -0.29
HNRNPC-216ENST00000555137 ADRA2BP18089 450 aa13.26□□□□□ -0.29
HNRNPC-216ENST00000555137 PLEKHO1Q53GL0 409 aaPredicted RBP13.26□□□□□ -0.29
HNRNPC-216ENST00000555137 NLGN1Q8N2Q7 840 aa13.26□□□□□ -0.29
HNRNPC-216ENST00000555137 BCS1LQ9Y276 419 aa13.26□□□□□ -0.29
HNRNPC-216ENST00000555137 CLSPNQ9HAW4 1339 aa13.25□□□□□ -0.29
HNRNPC-216ENST00000555137 PTCD1O75127 700 aaKnown RBP13.25□□□□□ -0.29
HNRNPC-216ENST00000555137 DPEP1P16444 411 aa13.25□□□□□ -0.29
HNRNPC-216ENST00000555137 CABP4P57796 275 aa13.25□□□□□ -0.29
HNRNPC-216ENST00000555137 TGFB2P61812 414 aa13.25□□□□□ -0.29
HNRNPC-216ENST00000555137 ADAMTS7Q9UKP4 1686 aa13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 KCNA3P22001 575 aa13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 RFC4P35249 363 aa13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 CRKLP46109 303 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 MTHFSP49914 203 aa13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 EIF4G2P78344 907 aaKnown RBP eCLIP13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 SRP68Q9UHB9 627 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-216ENST00000555137 SCN11AQ9UI33 1791 aa13.23□□□□□ -0.29
HNRNPC-216ENST00000555137 DDR1Q08345 913 aa13.23□□□□□ -0.29
HNRNPC-216ENST00000555137 SULT6B1Q6IMI4 303 aa13.23□□□□□ -0.29
HNRNPC-216ENST00000555137 MORC1Q86VD1 984 aa13.23□□□□□ -0.29
HNRNPC-216ENST00000555137 CCDC87Q9NVE4 849 aa13.23□□□□□ -0.29
HNRNPC-216ENST00000555137 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-216ENST00000555137 IL13P35225 146 aa13.22□□□□□ -0.29
HNRNPC-216ENST00000555137 FKBP8Q14318 412 aa13.22□□□□□ -0.29
HNRNPC-216ENST00000555137 C1orf141Q5JVX7 400 aa13.22□□□□□ -0.29
HNRNPC-216ENST00000555137 ARHGAP27Q6ZUM4 889 aa13.22□□□□□ -0.29
HNRNPC-216ENST00000555137 ARFGEF1Q9Y6D6 1849 aa13.22□□□□□ -0.29
HNRNPC-216ENST00000555137 FCHSD2O94868 740 aa13.21□□□□□ -0.29
HNRNPC-216ENST00000555137 INTS5Q6P9B9 1019 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-216ENST00000555137 NMRK2Q9NPI5 230 aa13.21□□□□□ -0.29
HNRNPC-216ENST00000555137 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.29
HNRNPC-216ENST00000555137 MRC1P22897 1456 aa13.2□□□□□ -0.3
HNRNPC-216ENST00000555137 CHRNA5P30532 468 aa13.19□□□□□ -0.3
HNRNPC-216ENST00000555137 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
HNRNPC-216ENST00000555137 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
HNRNPC-216ENST00000555137 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
HNRNPC-216ENST00000555137 VIRMAQ69YN4 1812 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-216ENST00000555137 POLRMTO00411 1230 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-216ENST00000555137 C9orf131Q5VYM1 1079 aa13.18□□□□□ -0.3
HNRNPC-216ENST00000555137 LGR6Q9HBX8 967 aa13.18□□□□□ -0.3
HNRNPC-216ENST00000555137 TOMM70O94826 608 aa13.17□□□□□ -0.3
HNRNPC-216ENST00000555137 SLC39A6Q13433 755 aa13.17□□□□□ -0.3
HNRNPC-216ENST00000555137 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
HNRNPC-216ENST00000555137 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
HNRNPC-216ENST00000555137 KNSTRNQ9Y448 316 aa13.17□□□□□ -0.3
HNRNPC-216ENST00000555137 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-216ENST00000555137 HMOX1P09601 288 aa13.16□□□□□ -0.3
HNRNPC-216ENST00000555137 TM4SF1P30408 202 aa13.16□□□□□ -0.3
HNRNPC-216ENST00000555137 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
HNRNPC-216ENST00000555137 DNAJC5GQ8N7S2 189 aa13.16□□□□□ -0.3
HNRNPC-216ENST00000555137 PIM2Q9P1W9 311 aa13.16□□□□□ -0.3
HNRNPC-216ENST00000555137 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-216ENST00000555137 SBF1O95248 1867 aa13.15□□□□□ -0.3
HNRNPC-216ENST00000555137 CYP19A1P11511 503 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-216ENST00000555137 APLP1P51693 650 aa13.15□□□□□ -0.3
HNRNPC-216ENST00000555137 DALRD3Q5D0E6 543 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-216ENST00000555137 WDR90Q96KV7 1748 aa13.14□□□□□ -0.31
HNRNPC-216ENST00000555137 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 392.9 ms