RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 ERVV-2B6SEH9 535 aa16.15■□□□□ 0.18
TRAPPC6B-204ENST00000554018 KDM6AO15550 1401 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC6B-204ENST00000554018 HSP90AB1P08238 724 aaKnown RBP16.15■□□□□ 0.18
TRAPPC6B-204ENST00000554018 ITPK1Q13572 414 aa16.15■□□□□ 0.18
TRAPPC6B-204ENST00000554018 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
TRAPPC6B-204ENST00000554018 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
TRAPPC6B-204ENST00000554018 DCAF5Q96JK2 942 aa16.15■□□□□ 0.18
TRAPPC6B-204ENST00000554018 AK7Q96M32 723 aa16.15■□□□□ 0.18
TRAPPC6B-204ENST00000554018 SCN11AQ9UI33 1791 aa16.15■□□□□ 0.18
TRAPPC6B-204ENST00000554018 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
TRAPPC6B-204ENST00000554018 FLAD1Q8NFF5 587 aa16.14■□□□□ 0.17
TRAPPC6B-204ENST00000554018 PHF14O94880 888 aa16.13■□□□□ 0.17
TRAPPC6B-204ENST00000554018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.12■□□□□ 0.17
TRAPPC6B-204ENST00000554018 CABP4P57796 275 aa16.12■□□□□ 0.17
TRAPPC6B-204ENST00000554018 C1orf141Q5JVX7 400 aa16.12■□□□□ 0.17
TRAPPC6B-204ENST00000554018 ZNF831Q5JPB2 1677 aa16.11■□□□□ 0.17
TRAPPC6B-204ENST00000554018 MYH14Q7Z406 1995 aaKnown RBP16.11■□□□□ 0.17
TRAPPC6B-204ENST00000554018 HMOX1P09601 288 aa16.11■□□□□ 0.17
TRAPPC6B-204ENST00000554018 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
TRAPPC6B-204ENST00000554018 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
TRAPPC6B-204ENST00000554018 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
TRAPPC6B-204ENST00000554018 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
TRAPPC6B-204ENST00000554018 COL5A3P25940 1745 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC6B-204ENST00000554018 GNPATO15228 680 aa16.1■□□□□ 0.17
TRAPPC6B-204ENST00000554018 DIAPH1O60610 1272 aaKnown RBP16.1■□□□□ 0.17
TRAPPC6B-204ENST00000554018 NFATC2IPQ8NCF5 419 aa16.1■□□□□ 0.17
TRAPPC6B-204ENST00000554018 SSFA2P28290 1259 aa16.08■□□□□ 0.16
TRAPPC6B-204ENST00000554018 GPR162Q16538 588 aa16.08■□□□□ 0.16
TRAPPC6B-204ENST00000554018 AKAP4Q5JQC9 854 aa16.07■□□□□ 0.16
TRAPPC6B-204ENST00000554018 PELP1Q8IZL8 1130 aaKnown RBP16.07■□□□□ 0.16
TRAPPC6B-204ENST00000554018 COL3A1P02461 1466 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC6B-204ENST00000554018 PTCD1O75127 700 aaKnown RBP16.06■□□□□ 0.16
TRAPPC6B-204ENST00000554018 LGR6Q9HBX8 967 aa16.06■□□□□ 0.16
TRAPPC6B-204ENST00000554018 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
TRAPPC6B-204ENST00000554018 TJP1Q07157 1748 aa16.05■□□□□ 0.16
TRAPPC6B-204ENST00000554018 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
TRAPPC6B-204ENST00000554018 RC3H1Q5TC82 1133 aaKnown RBP16.04■□□□□ 0.16
TRAPPC6B-204ENST00000554018 RTCBQ9Y3I0 505 aaKnown RBP16.04■□□□□ 0.16
TRAPPC6B-204ENST00000554018 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
TRAPPC6B-204ENST00000554018 RNMTO43148 476 aaKnown RBP16.03■□□□□ 0.16
TRAPPC6B-204ENST00000554018 TRAPPC3LQ5T215 181 aa16.03■□□□□ 0.16
TRAPPC6B-204ENST00000554018 SLC52A2Q9HAB3 445 aa16.03■□□□□ 0.16
TRAPPC6B-204ENST00000554018 CD2APQ9Y5K6 639 aa16.03■□□□□ 0.16
TRAPPC6B-204ENST00000554018 C4AP0C0L4 1744 aa16.02■□□□□ 0.16
TRAPPC6B-204ENST00000554018 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.16
TRAPPC6B-204ENST00000554018 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
TRAPPC6B-204ENST00000554018 ARHGEF1Q92888 912 aaKnown RBP16.01■□□□□ 0.15
TRAPPC6B-204ENST00000554018 MRC1P22897 1456 aa16.01■□□□□ 0.15
TRAPPC6B-204ENST00000554018 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC6B-204ENST00000554018 RPS6KA4O75676 772 aa16■□□□□ 0.15
TRAPPC6B-204ENST00000554018 CRKLP46109 303 aaKnown RBP16■□□□□ 0.15
TRAPPC6B-204ENST00000554018 SLC39A6Q13433 755 aa16■□□□□ 0.15
TRAPPC6B-204ENST00000554018 MMP10P09238 476 aa15.99■□□□□ 0.15
TRAPPC6B-204ENST00000554018 ADRA2BP18089 450 aa15.99■□□□□ 0.15
TRAPPC6B-204ENST00000554018 ZNF784Q8NCA9 323 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC6B-204ENST00000554018 KIF13BQ9NQT8 1826 aa15.98■□□□□ 0.15
TRAPPC6B-204ENST00000554018 PPP2R1AP30153 589 aa15.98■□□□□ 0.15
TRAPPC6B-204ENST00000554018 RFC4P35249 363 aa15.98■□□□□ 0.15
TRAPPC6B-204ENST00000554018 CFAP53Q96M91 514 aa15.98■□□□□ 0.15
TRAPPC6B-204ENST00000554018 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC6B-204ENST00000554018 UBR2Q8IWV8 1755 aa15.98■□□□□ 0.15
TRAPPC6B-204ENST00000554018 GYS1P13807 737 aa15.97■□□□□ 0.15
TRAPPC6B-204ENST00000554018 INTS5Q6P9B9 1019 aaKnown RBP15.97■□□□□ 0.15
TRAPPC6B-204ENST00000554018 DNAJC10Q8IXB1 793 aa15.97■□□□□ 0.15
TRAPPC6B-204ENST00000554018 NLGN1Q8N2Q7 840 aa15.97■□□□□ 0.15
TRAPPC6B-204ENST00000554018 KCPQ6ZWJ8 1503 aa15.97■□□□□ 0.15
TRAPPC6B-204ENST00000554018 N4BP2Q86UW6 1770 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC6B-204ENST00000554018 GRIN3BO60391 1043 aa15.96■□□□□ 0.15
TRAPPC6B-204ENST00000554018 GAS2L2Q8NHY3 880 aa15.96■□□□□ 0.15
TRAPPC6B-204ENST00000554018 PHACTR3Q96KR7 559 aa15.96■□□□□ 0.15
TRAPPC6B-204ENST00000554018 WWC3Q9ULE0 1092 aa15.96■□□□□ 0.15
TRAPPC6B-204ENST00000554018 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
TRAPPC6B-204ENST00000554018 PRKAR2BP31323 418 aa15.95■□□□□ 0.14
TRAPPC6B-204ENST00000554018 IL17REQ8NFR9 667 aa15.95■□□□□ 0.14
TRAPPC6B-204ENST00000554018 RSPH6AQ9H0K4 717 aa15.95■□□□□ 0.14
TRAPPC6B-204ENST00000554018 SRP68Q9UHB9 627 aaKnown RBP15.95■□□□□ 0.14
TRAPPC6B-204ENST00000554018 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
TRAPPC6B-204ENST00000554018 CYP19A1P11511 503 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC6B-204ENST00000554018 CCDC87Q9NVE4 849 aa15.94■□□□□ 0.14
TRAPPC6B-204ENST00000554018 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
TRAPPC6B-204ENST00000554018 U2AF1L5P0DN76 240 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC6B-204ENST00000554018 U2AF1Q01081 240 aaKnown RBP eCLIP15.93■□□□□ 0.14
TRAPPC6B-204ENST00000554018 TEFQ10587 303 aa15.92■□□□□ 0.14
TRAPPC6B-204ENST00000554018 FKBP8Q14318 412 aa15.92■□□□□ 0.14
TRAPPC6B-204ENST00000554018 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
TRAPPC6B-204ENST00000554018 TTC5Q8N0Z6 440 aa15.91■□□□□ 0.14
TRAPPC6B-204ENST00000554018 VSIG10Q8N0Z9 540 aa15.91■□□□□ 0.14
TRAPPC6B-204ENST00000554018 PARP3Q9Y6F1 533 aa15.91■□□□□ 0.14
TRAPPC6B-204ENST00000554018 SOS1Q07889 1333 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC6B-204ENST00000554018 BRCA1P38398 1863 aaKnown RBP15.91■□□□□ 0.14
TRAPPC6B-204ENST00000554018 C10orf71Q711Q0 1435 aa15.9■□□□□ 0.14
TRAPPC6B-204ENST00000554018 PXDNLA1KZ92 1463 aa15.9■□□□□ 0.14
TRAPPC6B-204ENST00000554018 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
TRAPPC6B-204ENST00000554018 AFDNP55196 1824 aaKnown RBP15.89■□□□□ 0.13
TRAPPC6B-204ENST00000554018 A0A0G2JLW4 131 aa15.89■□□□□ 0.13
TRAPPC6B-204ENST00000554018 FCHSD2O94868 740 aa15.89■□□□□ 0.13
TRAPPC6B-204ENST00000554018 DDR1Q08345 913 aa15.89■□□□□ 0.13
TRAPPC6B-204ENST00000554018 USPL1Q5W0Q7 1092 aa15.89■□□□□ 0.13
TRAPPC6B-204ENST00000554018 ZNF790Q6PG37 636 aa15.89■□□□□ 0.13
TRAPPC6B-204ENST00000554018 ZNF496Q96IT1 587 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms