RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 FRAT1Q92837 279 aaPredicted RBP11.79□□□□□ -0.52
MARK3-207ENST00000553942 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
MARK3-207ENST00000553942 OVOS2A0A0G2JMS6 1433 aa11.78□□□□□ -0.52
MARK3-207ENST00000553942 TEFQ10587 303 aa11.78□□□□□ -0.52
MARK3-207ENST00000553942 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
MARK3-207ENST00000553942 NRAPQ86VF7 1730 aa11.78□□□□□ -0.52
MARK3-207ENST00000553942 CHL1O00533 1208 aa11.77□□□□□ -0.52
MARK3-207ENST00000553942 CLUAP1Q96AJ1 413 aa11.77□□□□□ -0.52
MARK3-207ENST00000553942 QTRT2Q9H974 415 aaKnown RBP11.77□□□□□ -0.52
MARK3-207ENST00000553942 BTBD11A6QL63 1104 aa11.77□□□□□ -0.53
MARK3-207ENST00000553942 EXOC5O00471 708 aa11.77□□□□□ -0.53
MARK3-207ENST00000553942 ANXA1P04083 346 aa11.77□□□□□ -0.53
MARK3-207ENST00000553942 ANP32AP39687 249 aaKnown RBP11.77□□□□□ -0.53
MARK3-207ENST00000553942 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.53
MARK3-207ENST00000553942 MYH16Q9H6N6 1097 aa11.77□□□□□ -0.53
MARK3-207ENST00000553942 KCNQ2O43526 872 aa11.76□□□□□ -0.53
MARK3-207ENST00000553942 GNAI1P63096 354 aa11.76□□□□□ -0.53
MARK3-207ENST00000553942 LMOD3Q0VAK6 560 aa11.76□□□□□ -0.53
MARK3-207ENST00000553942 DDB1Q16531 1140 aa11.76□□□□□ -0.53
MARK3-207ENST00000553942 IFT57Q9NWB7 429 aa11.76□□□□□ -0.53
MARK3-207ENST00000553942 KCNQ4P56696 695 aa11.76□□□□□ -0.53
MARK3-207ENST00000553942 TAF7Q15545 349 aaPredicted RBP11.76□□□□□ -0.53
MARK3-207ENST00000553942 FBXO41Q8TF61 875 aa11.76□□□□□ -0.53
MARK3-207ENST00000553942 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
MARK3-207ENST00000553942 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
MARK3-207ENST00000553942 EIF2S2P20042 333 aaKnown RBP11.75□□□□□ -0.53
MARK3-207ENST00000553942 RARSP54136 660 aaKnown RBP11.75□□□□□ -0.53
MARK3-207ENST00000553942 TWISTNBQ3B726 338 aaPredicted RBP11.75□□□□□ -0.53
MARK3-207ENST00000553942 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
MARK3-207ENST00000553942 VAMP4O75379 141 aa11.75□□□□□ -0.53
MARK3-207ENST00000553942 VPS72Q15906 364 aa11.75□□□□□ -0.53
MARK3-207ENST00000553942 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
MARK3-207ENST00000553942 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
MARK3-207ENST00000553942 PCDH11XQ9BZA7 1347 aa11.75□□□□□ -0.53
MARK3-207ENST00000553942 PCDH11YQ9BZA8 1340 aa11.75□□□□□ -0.53
MARK3-207ENST00000553942 DISP2A7MBM2 1401 aa11.74□□□□□ -0.53
MARK3-207ENST00000553942 ABCC6O95255 1503 aa11.74□□□□□ -0.53
MARK3-207ENST00000553942 CABP4P57796 275 aa11.74□□□□□ -0.53
MARK3-207ENST00000553942 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
MARK3-207ENST00000553942 SLC52A2Q9HAB3 445 aa11.74□□□□□ -0.53
MARK3-207ENST00000553942 RGS17Q9UGC6 210 aaPredicted RBP11.74□□□□□ -0.53
MARK3-207ENST00000553942 ASAP1Q9ULH1 1129 aa11.74□□□□□ -0.53
MARK3-207ENST00000553942 SHANK3Q9BYB0 1731 aa11.74□□□□□ -0.53
MARK3-207ENST00000553942 RRP1P56182 461 aaKnown RBP11.73□□□□□ -0.53
MARK3-207ENST00000553942 NGEFQ8N5V2 710 aa11.73□□□□□ -0.53
MARK3-207ENST00000553942 PANK1Q8TE04 598 aa11.73□□□□□ -0.53
MARK3-207ENST00000553942 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
MARK3-207ENST00000553942 SMC4Q9NTJ3 1288 aa11.73□□□□□ -0.53
MARK3-207ENST00000553942 PIGBQ92521 554 aa11.72□□□□□ -0.53
MARK3-207ENST00000553942 IL16Q14005 1332 aa11.72□□□□□ -0.53
MARK3-207ENST00000553942 VIRMAQ69YN4 1812 aaKnown RBP11.72□□□□□ -0.53
MARK3-207ENST00000553942 GLI3P10071 1580 aa11.72□□□□□ -0.53
MARK3-207ENST00000553942 G2E3Q7L622 706 aa11.72□□□□□ -0.53
MARK3-207ENST00000553942 ZNF496Q96IT1 587 aaPredicted RBP11.72□□□□□ -0.53
MARK3-207ENST00000553942 RLBP1P12271 317 aa11.71□□□□□ -0.53
MARK3-207ENST00000553942 EIF4A1P60842 406 aaKnown RBP11.71□□□□□ -0.53
MARK3-207ENST00000553942 POTEAQ6S8J7 498 aa11.71□□□□□ -0.53
MARK3-207ENST00000553942 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.53
MARK3-207ENST00000553942 SEPT12Q8IYM1 358 aa11.71□□□□□ -0.53
MARK3-207ENST00000553942 EXOC6Q8TAG9 804 aa11.71□□□□□ -0.53
MARK3-207ENST00000553942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.535e-7■■□□□ 13.8
MARK3-207ENST00000553942 HTATSF1O43719 755 aaKnown RBP11.71□□□□□ -0.54
MARK3-207ENST00000553942 ZNF790Q6PG37 636 aa11.71□□□□□ -0.54
MARK3-207ENST00000553942 NOB1Q9ULX3 412 aaKnown RBP11.71□□□□□ -0.54
MARK3-207ENST00000553942 PKD1L3Q7Z443 1732 aa11.71□□□□□ -0.54
MARK3-207ENST00000553942 PARP4Q9UKK3 1724 aaKnown RBP11.71□□□□□ -0.54
MARK3-207ENST00000553942 CALD1Q05682 793 aaKnown RBP11.7□□□□□ -0.54
MARK3-207ENST00000553942 PROSER3Q2NL68 480 aa11.7□□□□□ -0.54
MARK3-207ENST00000553942 TRPC5Q9UL62 973 aaPredicted RBP11.7□□□□□ -0.54
MARK3-207ENST00000553942 USP16Q9Y5T5 823 aa11.7□□□□□ -0.54
MARK3-207ENST00000553942 TOGARAM1Q9Y4F4 1720 aa11.7□□□□□ -0.54
MARK3-207ENST00000553942 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
MARK3-207ENST00000553942 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
MARK3-207ENST00000553942 PODXL2Q9NZ53 605 aa11.7□□□□□ -0.54
MARK3-207ENST00000553942 NWD2Q9ULI1 1742 aa11.69□□□□□ -0.54
MARK3-207ENST00000553942 BARGINQ6ZT62 677 aa11.69□□□□□ -0.54
MARK3-207ENST00000553942 CRBNQ96SW2 442 aa11.69□□□□□ -0.54
MARK3-207ENST00000553942 PHAXQ9H814 394 aaKnown RBP11.69□□□□□ -0.54
MARK3-207ENST00000553942 LRRC37A3O60309 1634 aa11.69□□□□□ -0.54
MARK3-207ENST00000553942 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
MARK3-207ENST00000553942 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
MARK3-207ENST00000553942 TMOD3Q9NYL9 352 aa11.69□□□□□ -0.54
MARK3-207ENST00000553942 COG6Q9Y2V7 657 aa11.69□□□□□ -0.54
MARK3-207ENST00000553942 F6X3S4 739 aa11.68□□□□□ -0.54
MARK3-207ENST00000553942 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
MARK3-207ENST00000553942 THRAP3Q9Y2W1 955 aaKnown RBP11.68□□□□□ -0.54
MARK3-207ENST00000553942 TNS2Q63HR2 1409 aa11.68□□□□□ -0.54
MARK3-207ENST00000553942 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
MARK3-207ENST00000553942 MYL6BP14649 208 aa11.67□□□□□ -0.54
MARK3-207ENST00000553942 NKX1-1Q15270 411 aaPredicted RBP11.67□□□□□ -0.54
MARK3-207ENST00000553942 SLC4A9Q96Q91 983 aa11.67□□□□□ -0.54
MARK3-207ENST00000553942 CHPF2Q9P2E5 772 aa11.67□□□□□ -0.54
MARK3-207ENST00000553942 ATRNO75882 1429 aa11.67□□□□□ -0.54
MARK3-207ENST00000553942 GIGYF1O75420 1035 aaPredicted RBP11.67□□□□□ -0.54
MARK3-207ENST00000553942 MRPL50Q8N5N7 158 aaKnown RBP11.67□□□□□ -0.54
MARK3-207ENST00000553942 ATG3Q9NT62 314 aa11.67□□□□□ -0.54
MARK3-207ENST00000553942 ZNF330Q9Y3S2 320 aaPredicted RBP11.67□□□□□ -0.54
MARK3-207ENST00000553942 TRIM27P14373 513 aa11.66□□□□□ -0.54
MARK3-207ENST00000553942 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
MARK3-207ENST00000553942 TTC5Q8N0Z6 440 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms