RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 FCHSD2O94868 740 aa9.26□□□□□ -0.93
GPHN-206ENST00000553936 DSG3P32926 999 aa9.26□□□□□ -0.93
GPHN-206ENST00000553936 USHBP1Q8N6Y0 703 aa9.26□□□□□ -0.93
GPHN-206ENST00000553936 SMC1BQ8NDV3 1235 aa9.26□□□□□ -0.93
GPHN-206ENST00000553936 PXDNLA1KZ92 1463 aa9.26□□□□□ -0.93
GPHN-206ENST00000553936 A0A0G2JLW4 131 aa9.25□□□□□ -0.93
GPHN-206ENST00000553936 ATP6V1AP38606 617 aa9.25□□□□□ -0.93
GPHN-206ENST00000553936 TMF1P82094 1093 aa9.25□□□□□ -0.93
GPHN-206ENST00000553936 TRAPPC3LQ5T215 181 aa9.25□□□□□ -0.93
GPHN-206ENST00000553936 C9orf131Q5VYM1 1079 aa9.25□□□□□ -0.93
GPHN-206ENST00000553936 TMOD3Q9NYL9 352 aa9.25□□□□□ -0.93
GPHN-206ENST00000553936 SPG7Q9UQ90 795 aa9.25□□□□□ -0.93
GPHN-206ENST00000553936 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
GPHN-206ENST00000553936 KIF24Q5T7B8 1368 aa9.24□□□□□ -0.93
GPHN-206ENST00000553936 UBR3Q6ZT12 1888 aa9.24□□□□□ -0.93
GPHN-206ENST00000553936 RRS1Q15050 365 aaKnown RBP9.24□□□□□ -0.93
GPHN-206ENST00000553936 AMIGO3Q86WK7 504 aa9.24□□□□□ -0.93
GPHN-206ENST00000553936 LINC00116Q8NCU8 138 aa9.24□□□□□ -0.93
GPHN-206ENST00000553936 PIGBQ92521 554 aa9.24□□□□□ -0.93
GPHN-206ENST00000553936 PARP3Q9Y6F1 533 aa9.24□□□□□ -0.93
GPHN-206ENST00000553936 INSRP06213 1382 aa9.24□□□□□ -0.93
GPHN-206ENST00000553936 FLT4P35916 1363 aa9.24□□□□□ -0.93
GPHN-206ENST00000553936 C10orf71Q711Q0 1435 aa9.23□□□□□ -0.93
GPHN-206ENST00000553936 CYP27B1O15528 508 aa9.23□□□□□ -0.93
GPHN-206ENST00000553936 HTRA3P83110 453 aa9.23□□□□□ -0.93
GPHN-206ENST00000553936 NEUROD1Q13562 356 aa9.23□□□□□ -0.93
GPHN-206ENST00000553936 NKX1-1Q15270 411 aaPredicted RBP9.23□□□□□ -0.93
GPHN-206ENST00000553936 PIM2Q9P1W9 311 aa9.23□□□□□ -0.93
GPHN-206ENST00000553936 TOGARAM1Q9Y4F4 1720 aa9.22□□□□□ -0.93
GPHN-206ENST00000553936 HSPA1AP0DMV8 641 aaKnown RBP9.22□□□□□ -0.93
GPHN-206ENST00000553936 HSPA1BP0DMV9 641 aaKnown RBP9.22□□□□□ -0.93
GPHN-206ENST00000553936 DPEP1P16444 411 aa9.22□□□□□ -0.93
GPHN-206ENST00000553936 FBLN1P23142 703 aa9.22□□□□□ -0.93
GPHN-206ENST00000553936 RFC4P35249 363 aa9.22□□□□□ -0.93
GPHN-206ENST00000553936 DALRD3Q5D0E6 543 aaKnown RBP9.22□□□□□ -0.93
GPHN-206ENST00000553936 RRAGCQ9HB90 399 aa9.22□□□□□ -0.93
GPHN-206ENST00000553936 RNF181Q9P0P0 153 aa9.22□□□□□ -0.93
GPHN-206ENST00000553936 ZC3H4Q9UPT8 1303 aaKnown RBP9.22□□□□□ -0.93
GPHN-206ENST00000553936 RGPD2P0DJD1 1756 aa9.22□□□□□ -0.93
GPHN-206ENST00000553936 KIF13BQ9NQT8 1826 aa9.21□□□□□ -0.93
GPHN-206ENST00000553936 HSP90AB2PQ58FF8 381 aa9.21□□□□□ -0.94
GPHN-206ENST00000553936 SMIM5Q71RC9 77 aa9.21□□□□□ -0.94
GPHN-206ENST00000553936 SIN3AQ96ST3 1273 aa9.21□□□□□ -0.94
GPHN-206ENST00000553936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.21□□□□□ -0.942e-6■■■■□ 20.1
GPHN-206ENST00000553936 ZNF219Q9P2Y4 722 aaPredicted RBP9.21□□□□□ -0.94
GPHN-206ENST00000553936 KCPQ6ZWJ8 1503 aa9.21□□□□□ -0.94
GPHN-206ENST00000553936 ITPK1Q13572 414 aa9.2□□□□□ -0.94
GPHN-206ENST00000553936 IFNL2Q8IZJ0 200 aa9.2□□□□□ -0.94
GPHN-206ENST00000553936 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
GPHN-206ENST00000553936 GGNBP2Q9H3C7 697 aa9.2□□□□□ -0.94
GPHN-206ENST00000553936 TNRC6CQ9HCJ0 1690 aaKnown RBP9.2□□□□□ -0.94
GPHN-206ENST00000553936 N4BP2Q86UW6 1770 aaPredicted RBP9.19□□□□□ -0.94
GPHN-206ENST00000553936 ITGB4P16144 1822 aa9.19□□□□□ -0.94
GPHN-206ENST00000553936 FYB1O15117 783 aa9.19□□□□□ -0.94
GPHN-206ENST00000553936 VEGFAP15692 232 aaPredicted RBP9.19□□□□□ -0.94
GPHN-206ENST00000553936 RC3H1Q5TC82 1133 aaKnown RBP9.19□□□□□ -0.94
GPHN-206ENST00000553936 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
GPHN-206ENST00000553936 ASAP1Q9ULH1 1129 aa9.19□□□□□ -0.94
GPHN-206ENST00000553936 HSP90AB1P08238 724 aaKnown RBP9.18□□□□□ -0.94
GPHN-206ENST00000553936 C4AP0C0L4 1744 aa9.18□□□□□ -0.94
GPHN-206ENST00000553936 GYS1P13807 737 aa9.18□□□□□ -0.94
GPHN-206ENST00000553936 RBM42Q9BTD8 480 aaKnown RBP9.18□□□□□ -0.94
GPHN-206ENST00000553936 CNTNAP4Q9C0A0 1308 aa9.18□□□□□ -0.94
GPHN-206ENST00000553936 ATG3Q9NT62 314 aa9.18□□□□□ -0.94
GPHN-206ENST00000553936 MAP2P11137 1827 aaKnown RBP9.17□□□□□ -0.94
GPHN-206ENST00000553936 PKD1L3Q7Z443 1732 aa9.17□□□□□ -0.94
GPHN-206ENST00000553936 KIAA1551Q9HCM1 1747 aa9.17□□□□□ -0.94
GPHN-206ENST00000553936 RPS6KA4O75676 772 aa9.17□□□□□ -0.94
GPHN-206ENST00000553936 PHKG2P15735 406 aa9.17□□□□□ -0.94
GPHN-206ENST00000553936 KCNA3P22001 575 aa9.17□□□□□ -0.94
GPHN-206ENST00000553936 ARFGEF1Q9Y6D6 1849 aa9.17□□□□□ -0.94
GPHN-206ENST00000553936 TONSLQ96HA7 1378 aa9.16□□□□□ -0.94
GPHN-206ENST00000553936 GLTPD2A6NH11 291 aa9.16□□□□□ -0.94
GPHN-206ENST00000553936 ERVV-2B6SEH9 535 aa9.16□□□□□ -0.94
GPHN-206ENST00000553936 PPM1GO15355 546 aaPredicted RBP9.16□□□□□ -0.94
GPHN-206ENST00000553936 CDCA8Q53HL2 280 aa9.16□□□□□ -0.94
GPHN-206ENST00000553936 DPY19L2Q6NUT2 758 aa9.16□□□□□ -0.94
GPHN-206ENST00000553936 KDRP35968 1356 aa9.15□□□□□ -0.94
GPHN-206ENST00000553936 ST20-MTHFSA0A0A6YYL1 179 aa9.15□□□□□ -0.94
GPHN-206ENST00000553936 LMNB1P20700 586 aa9.15□□□□□ -0.94
GPHN-206ENST00000553936 TESK2Q96S53 571 aa9.15□□□□□ -0.94
GPHN-206ENST00000553936 BRCA1P38398 1863 aaKnown RBP9.15□□□□□ -0.95
GPHN-206ENST00000553936 NCAPD2Q15021 1401 aa9.14□□□□□ -0.95
GPHN-206ENST00000553936 SLC34A2O95436 690 aa9.14□□□□□ -0.95
GPHN-206ENST00000553936 AIDAQ96BJ3 306 aa9.14□□□□□ -0.95
GPHN-206ENST00000553936 CREBZFQ9NS37 354 aa9.14□□□□□ -0.95
GPHN-206ENST00000553936 ZNF831Q5JPB2 1677 aa9.13□□□□□ -0.95
GPHN-206ENST00000553936 WASHC2AQ641Q2 1341 aa9.13□□□□□ -0.95
GPHN-206ENST00000553936 USP42Q9H9J4 1324 aaKnown RBP9.13□□□□□ -0.95
GPHN-206ENST00000553936 ZPR1O75312 459 aa9.13□□□□□ -0.95
GPHN-206ENST00000553936 CHRNA5P30532 468 aa9.13□□□□□ -0.95
GPHN-206ENST00000553936 CABP4P57796 275 aa9.13□□□□□ -0.95
GPHN-206ENST00000553936 EYA1Q99502 592 aa9.13□□□□□ -0.95
GPHN-206ENST00000553936 PRDM10Q9NQV6 1147 aa9.13□□□□□ -0.95
GPHN-206ENST00000553936 EMILIN1Q9Y6C2 1016 aa9.13□□□□□ -0.95
GPHN-206ENST00000553936 RASSF7Q02833 373 aa9.12□□□□□ -0.95
GPHN-206ENST00000553936 KDM6AO15550 1401 aaPredicted RBP9.12□□□□□ -0.95
GPHN-206ENST00000553936 KIF20BQ96Q89 1820 aa9.11□□□□□ -0.95
GPHN-206ENST00000553936 POLRMTO00411 1230 aaKnown RBP9.11□□□□□ -0.95
GPHN-206ENST00000553936 CRKLP46109 303 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms