RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 IL17REQ8NFR9 667 aa18.22■□□□□ 0.51
TUBB3-202ENST00000553656 CAMKK2Q96RR4 588 aa18.22■□□□□ 0.51
TUBB3-202ENST00000553656 RRP7AQ9Y3A4 280 aaKnown RBP18.22■□□□□ 0.51
TUBB3-202ENST00000553656 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.51
TUBB3-202ENST00000553656 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
TUBB3-202ENST00000553656 MCM10Q7L590 875 aa18.21■□□□□ 0.51
TUBB3-202ENST00000553656 CEMIPQ8WUJ3 1361 aa18.2■□□□□ 0.5
TUBB3-202ENST00000553656 APAF1O14727 1248 aa18.2■□□□□ 0.5
TUBB3-202ENST00000553656 DCTN1Q14203 1278 aa18.2■□□□□ 0.5
TUBB3-202ENST00000553656 TXNRD1Q16881 649 aa18.2■□□□□ 0.5
TUBB3-202ENST00000553656 DLG5Q8TDM6 1919 aa18.19■□□□□ 0.5
TUBB3-202ENST00000553656 ASAP1Q9ULH1 1129 aa18.19■□□□□ 0.5
TUBB3-202ENST00000553656 HMGB2P26583 209 aaKnown RBP18.18■□□□□ 0.5
TUBB3-202ENST00000553656 SLC27A3Q5K4L6 730 aa18.18■□□□□ 0.5
TUBB3-202ENST00000553656 ATG3Q9NT62 314 aa18.18■□□□□ 0.5
TUBB3-202ENST00000553656 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
TUBB3-202ENST00000553656 TTC5Q8N0Z6 440 aa18.17■□□□□ 0.5
TUBB3-202ENST00000553656 RREB1Q92766 1687 aa18.17■□□□□ 0.5
TUBB3-202ENST00000553656 LY75O60449 1722 aa18.15■□□□□ 0.5
TUBB3-202ENST00000553656 LOC102724428A0A0B4J2F2 783 aa18.15■□□□□ 0.5
TUBB3-202ENST00000553656 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
TUBB3-202ENST00000553656 SIK1P57059 783 aa18.15■□□□□ 0.5
TUBB3-202ENST00000553656 NBPF14Q5TI25 921 aa18.15■□□□□ 0.5
TUBB3-202ENST00000553656 RBM42Q9BTD8 480 aaKnown RBP18.15■□□□□ 0.5
TUBB3-202ENST00000553656 THUMPD2Q9BTF0 503 aaKnown RBP18.15■□□□□ 0.5
TUBB3-202ENST00000553656 SLC39A6Q13433 755 aa18.14■□□□□ 0.49
TUBB3-202ENST00000553656 TAF7Q15545 349 aaPredicted RBP18.14■□□□□ 0.49
TUBB3-202ENST00000553656 PROM2Q8N271 834 aa18.14■□□□□ 0.49
TUBB3-202ENST00000553656 NUP188Q5SRE5 1749 aa18.14■□□□□ 0.49
TUBB3-202ENST00000553656 SIPA1L3O60292 1781 aaPredicted RBP18.13■□□□□ 0.49
TUBB3-202ENST00000553656 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
TUBB3-202ENST00000553656 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
TUBB3-202ENST00000553656 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
TUBB3-202ENST00000553656 ATP6V1AP38606 617 aa18.12■□□□□ 0.49
TUBB3-202ENST00000553656 ZNF790Q6PG37 636 aa18.12■□□□□ 0.49
TUBB3-202ENST00000553656 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
TUBB3-202ENST00000553656 KCNQ4P56696 695 aa18.11■□□□□ 0.49
TUBB3-202ENST00000553656 LRRC4BQ9NT99 713 aa18.11■□□□□ 0.49
TUBB3-202ENST00000553656 STK32BQ9NY57 414 aa18.11■□□□□ 0.49
TUBB3-202ENST00000553656 SENP3-EIF4A1A0A087X0R7 540 aa18.1■□□□□ 0.49
TUBB3-202ENST00000553656 NGEFQ8N5V2 710 aa18.1■□□□□ 0.49
TUBB3-202ENST00000553656 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
TUBB3-202ENST00000553656 FMNL2Q96PY5 1086 aa18.09■□□□□ 0.49
TUBB3-202ENST00000553656 TSPYL4Q9UJ04 414 aa18.09■□□□□ 0.49
TUBB3-202ENST00000553656 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
TUBB3-202ENST00000553656 CCDC27Q2M243 656 aa18.08■□□□□ 0.48
TUBB3-202ENST00000553656 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.48
TUBB3-202ENST00000553656 C5P01031 1676 aa18.08■□□□□ 0.48
TUBB3-202ENST00000553656 KCPQ6ZWJ8 1503 aa18.08■□□□□ 0.48
TUBB3-202ENST00000553656 ZNF831Q5JPB2 1677 aa18.07■□□□□ 0.48
TUBB3-202ENST00000553656 ZNF496Q96IT1 587 aaPredicted RBP18.07■□□□□ 0.48
TUBB3-202ENST00000553656 BABAM1Q9NWV8 329 aa18.07■□□□□ 0.48
TUBB3-202ENST00000553656 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
TUBB3-202ENST00000553656 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
TUBB3-202ENST00000553656 ITPK1Q13572 414 aa18.06■□□□□ 0.48
TUBB3-202ENST00000553656 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
TUBB3-202ENST00000553656 AK7Q96M32 723 aa18.06■□□□□ 0.48
TUBB3-202ENST00000553656 ANO8Q9HCE9 1232 aaPredicted RBP18.06■□□□□ 0.48
TUBB3-202ENST00000553656 HEG1Q9ULI3 1381 aa18.05■□□□□ 0.48
TUBB3-202ENST00000553656 KCNQ3O43525 872 aa18.05■□□□□ 0.48
TUBB3-202ENST00000553656 SLC15A2Q16348 729 aa18.05■□□□□ 0.48
TUBB3-202ENST00000553656 WWC1Q8IX03 1113 aa18.05■□□□□ 0.48
TUBB3-202ENST00000553656 LINC00116Q8NCU8 138 aa18.05■□□□□ 0.48
TUBB3-202ENST00000553656 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
TUBB3-202ENST00000553656 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
TUBB3-202ENST00000553656 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
TUBB3-202ENST00000553656 TEX13AQ9BXU3 409 aaPredicted RBP18.04■□□□□ 0.48
TUBB3-202ENST00000553656 IFT57Q9NWB7 429 aa18.04■□□□□ 0.48
TUBB3-202ENST00000553656 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
TUBB3-202ENST00000553656 TAF1LQ8IZX4 1826 aa18.04■□□□□ 0.48
TUBB3-202ENST00000553656 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
TUBB3-202ENST00000553656 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
TUBB3-202ENST00000553656 STARD3NLO95772 234 aa18.03■□□□□ 0.48
TUBB3-202ENST00000553656 GNAI1P63096 354 aa18.03■□□□□ 0.48
TUBB3-202ENST00000553656 ZNF827Q17R98 1081 aa18.03■□□□□ 0.48
TUBB3-202ENST00000553656 DNAJC10Q8IXB1 793 aa18.03■□□□□ 0.48
TUBB3-202ENST00000553656 AKT1S1Q96B36 256 aa18.03■□□□□ 0.48
TUBB3-202ENST00000553656 CFAP44Q96MT7 982 aa18.03■□□□□ 0.48
TUBB3-202ENST00000553656 CICQ96RK0 1608 aaPredicted RBP18.02■□□□□ 0.48
TUBB3-202ENST00000553656 CHL1O00533 1208 aa18.02■□□□□ 0.48
TUBB3-202ENST00000553656 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
TUBB3-202ENST00000553656 TJP1Q07157 1748 aa18.02■□□□□ 0.48
TUBB3-202ENST00000553656 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
TUBB3-202ENST00000553656 GNPATO15228 680 aa18.01■□□□□ 0.47
TUBB3-202ENST00000553656 WDR63Q8IWG1 891 aa18.01■□□□□ 0.47
TUBB3-202ENST00000553656 COL5A3P25940 1745 aaPredicted RBP18.01■□□□□ 0.47
TUBB3-202ENST00000553656 IL16Q14005 1332 aa18■□□□□ 0.47
TUBB3-202ENST00000553656 EIF4A1P60842 406 aaKnown RBP18■□□□□ 0.47
TUBB3-202ENST00000553656 RC3H1Q5TC82 1133 aaKnown RBP18■□□□□ 0.47
TUBB3-202ENST00000553656 CRKLP46109 303 aaKnown RBP17.99■□□□□ 0.47
TUBB3-202ENST00000553656 FLAD1Q8NFF5 587 aa17.99■□□□□ 0.47
TUBB3-202ENST00000553656 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
TUBB3-202ENST00000553656 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
TUBB3-202ENST00000553656 RTCBQ9Y3I0 505 aaKnown RBP17.99■□□□□ 0.47
TUBB3-202ENST00000553656 MSH5O43196 834 aa17.98■□□□□ 0.47
TUBB3-202ENST00000553656 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
TUBB3-202ENST00000553656 CYP19A1P11511 503 aaPredicted RBP17.98■□□□□ 0.47
TUBB3-202ENST00000553656 GIGYF1O75420 1035 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-202ENST00000553656 PHF14O94880 888 aa17.97■□□□□ 0.47
TUBB3-202ENST00000553656 SSFA2P28290 1259 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms