RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 PLEKHG2Q9H7P9 1386 aa11.29□□□□□ -0.6
AC055716.2-201ENST00000552545 KDM6AO15550 1401 aaPredicted RBP11.29□□□□□ -0.6
AC055716.2-201ENST00000552545 ZNF772Q68DY9 489 aaPredicted RBP11.29□□□□□ -0.6
AC055716.2-201ENST00000552545 SYTL4Q96C24 671 aaPredicted RBP11.29□□□□□ -0.6
AC055716.2-201ENST00000552545 RCAN3Q9UKA8 241 aa11.29□□□□□ -0.6
AC055716.2-201ENST00000552545 ATRNO75882 1429 aa11.29□□□□□ -0.6
AC055716.2-201ENST00000552545 GLI3P10071 1580 aa11.28□□□□□ -0.6
AC055716.2-201ENST00000552545 SLC52A2Q9HAB3 445 aa11.28□□□□□ -0.6
AC055716.2-201ENST00000552545 LRRC37A3O60309 1634 aa11.28□□□□□ -0.6
AC055716.2-201ENST00000552545 TNS2Q63HR2 1409 aa11.28□□□□□ -0.6
AC055716.2-201ENST00000552545 KRT24Q2M2I5 525 aa11.27□□□□□ -0.6
AC055716.2-201ENST00000552545 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.6
AC055716.2-201ENST00000552545 SLC39A6Q13433 755 aa11.27□□□□□ -0.61
AC055716.2-201ENST00000552545 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.61
AC055716.2-201ENST00000552545 C8orf58Q8NAV2 365 aa11.27□□□□□ -0.61
AC055716.2-201ENST00000552545 KCNQ3O43525 872 aa11.26□□□□□ -0.61
AC055716.2-201ENST00000552545 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
AC055716.2-201ENST00000552545 FAM182BQ5T319 152 aa11.26□□□□□ -0.61
AC055716.2-201ENST00000552545 SEPT12Q8IYM1 358 aa11.26□□□□□ -0.61
AC055716.2-201ENST00000552545 TSPYL6Q8N831 410 aa11.26□□□□□ -0.61
AC055716.2-201ENST00000552545 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
AC055716.2-201ENST00000552545 TWISTNBQ3B726 338 aaPredicted RBP11.26□□□□□ -0.61
AC055716.2-201ENST00000552545 BCL2L13Q9BXK5 485 aa11.26□□□□□ -0.61
AC055716.2-201ENST00000552545 TMOD3Q9NYL9 352 aa11.26□□□□□ -0.61
AC055716.2-201ENST00000552545 SIPA1L3O60292 1781 aaPredicted RBP11.25□□□□□ -0.61
AC055716.2-201ENST00000552545 ERVV-2B6SEH9 535 aa11.25□□□□□ -0.61
AC055716.2-201ENST00000552545 TCERG1O14776 1098 aaKnown RBP11.25□□□□□ -0.61
AC055716.2-201ENST00000552545 ILDR1Q86SU0 546 aaPredicted RBP11.25□□□□□ -0.61
AC055716.2-201ENST00000552545 TTC5Q8N0Z6 440 aa11.25□□□□□ -0.61
AC055716.2-201ENST00000552545 ITGB4P16144 1822 aa11.25□□□□□ -0.61
AC055716.2-201ENST00000552545 ADAMTS7Q9UKP4 1686 aa11.25□□□□□ -0.61
AC055716.2-201ENST00000552545 BCAR3O75815 825 aa11.24□□□□□ -0.61
AC055716.2-201ENST00000552545 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
AC055716.2-201ENST00000552545 RBM6P78332 1123 aaKnown RBP11.24□□□□□ -0.61
AC055716.2-201ENST00000552545 IRX6P78412 446 aaPredicted RBP11.24□□□□□ -0.61
AC055716.2-201ENST00000552545 NECTIN2Q92692 538 aa11.24□□□□□ -0.61
AC055716.2-201ENST00000552545 TOGARAM1Q9Y4F4 1720 aa11.24□□□□□ -0.61
AC055716.2-201ENST00000552545 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
AC055716.2-201ENST00000552545 KDM3BQ7LBC6 1761 aa11.24□□□□□ -0.61
AC055716.2-201ENST00000552545 DOT1LQ8TEK3 1739 aa11.23□□□□□ -0.61
AC055716.2-201ENST00000552545 PLIN1O60240 522 aa11.23□□□□□ -0.61
AC055716.2-201ENST00000552545 VAMP4O75379 141 aa11.23□□□□□ -0.61
AC055716.2-201ENST00000552545 RXRBP28702 533 aa11.23□□□□□ -0.61
AC055716.2-201ENST00000552545 ZNF790Q6PG37 636 aa11.23□□□□□ -0.61
AC055716.2-201ENST00000552545 THSD7AQ9UPZ6 1657 aa11.23□□□□□ -0.61
AC055716.2-201ENST00000552545 CANXP27824 592 aaKnown RBP11.23□□□□□ -0.61
AC055716.2-201ENST00000552545 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
AC055716.2-201ENST00000552545 FRAT1Q92837 279 aaPredicted RBP11.23□□□□□ -0.61
AC055716.2-201ENST00000552545 ONECUT3O60422 494 aaPredicted RBP11.22□□□□□ -0.61
AC055716.2-201ENST00000552545 NEFLP07196 543 aa11.22□□□□□ -0.61
AC055716.2-201ENST00000552545 EIF2S2P20042 333 aaKnown RBP11.22□□□□□ -0.61
AC055716.2-201ENST00000552545 RARSP54136 660 aaKnown RBP11.22□□□□□ -0.61
AC055716.2-201ENST00000552545 PIGBQ92521 554 aa11.22□□□□□ -0.61
AC055716.2-201ENST00000552545 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
AC055716.2-201ENST00000552545 RGS17Q9UGC6 210 aaPredicted RBP11.22□□□□□ -0.61
AC055716.2-201ENST00000552545 BRWD3Q6RI45 1802 aa11.22□□□□□ -0.61
AC055716.2-201ENST00000552545 PTCD1O75127 700 aaKnown RBP11.21□□□□□ -0.61
AC055716.2-201ENST00000552545 CT47B1P0C2W7 299 aaPredicted RBP11.21□□□□□ -0.61
AC055716.2-201ENST00000552545 MRC1P22897 1456 aa11.21□□□□□ -0.62
AC055716.2-201ENST00000552545 KCNQ2O43526 872 aa11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 POTEAQ6S8J7 498 aa11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 SSH1Q8WYL5 1049 aa11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 ASAP1Q9ULH1 1129 aa11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 KRT27Q7Z3Y8 459 aa11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 HOMEZQ8IX15 550 aa11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 FMNL2Q96PY5 1086 aa11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
AC055716.2-201ENST00000552545 RRP1P56182 461 aaKnown RBP11.19□□□□□ -0.62
AC055716.2-201ENST00000552545 HDGFL1Q5TGJ6 251 aa11.19□□□□□ -0.62
AC055716.2-201ENST00000552545 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.19□□□□□ -0.62
AC055716.2-201ENST00000552545 FKBP8Q14318 412 aa11.18□□□□□ -0.62
AC055716.2-201ENST00000552545 ATG3Q9NT62 314 aa11.18□□□□□ -0.62
AC055716.2-201ENST00000552545 BCL9O00512 1426 aa11.18□□□□□ -0.62
AC055716.2-201ENST00000552545 GIGYF1O75420 1035 aaPredicted RBP11.18□□□□□ -0.62
AC055716.2-201ENST00000552545 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
AC055716.2-201ENST00000552545 CCDC30Q5VVM6 783 aa11.18□□□□□ -0.62
AC055716.2-201ENST00000552545 ZNF428Q96B54 188 aa11.18□□□□□ -0.62
AC055716.2-201ENST00000552545 STK31Q9BXU1 1019 aa11.18□□□□□ -0.62
AC055716.2-201ENST00000552545 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
AC055716.2-201ENST00000552545 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
AC055716.2-201ENST00000552545 SNRPA1P09661 255 aaKnown RBP11.17□□□□□ -0.62
AC055716.2-201ENST00000552545 PTF1AQ7RTS3 328 aa11.17□□□□□ -0.62
AC055716.2-201ENST00000552545 NOB1Q9ULX3 412 aaKnown RBP11.17□□□□□ -0.62
AC055716.2-201ENST00000552545 MRPL50Q8N5N7 158 aaKnown RBP11.16□□□□□ -0.62
AC055716.2-201ENST00000552545 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
AC055716.2-201ENST00000552545 USP16Q9Y5T5 823 aa11.16□□□□□ -0.62
AC055716.2-201ENST00000552545 C5P01031 1676 aa11.16□□□□□ -0.62
AC055716.2-201ENST00000552545 SBF2Q86WG5 1849 aa11.16□□□□□ -0.62
AC055716.2-201ENST00000552545 PAPPAQ13219 1627 aa11.15□□□□□ -0.62
AC055716.2-201ENST00000552545 ANXA1P04083 346 aa11.15□□□□□ -0.62
AC055716.2-201ENST00000552545 FAM196AQ6ZSG2 479 aa11.15□□□□□ -0.62
AC055716.2-201ENST00000552545 CHPF2Q9P2E5 772 aa11.15□□□□□ -0.62
AC055716.2-201ENST00000552545 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.62
AC055716.2-201ENST00000552545 UBR2Q8IWV8 1755 aa11.15□□□□□ -0.62
AC055716.2-201ENST00000552545 HOXB7P09629 217 aa11.15□□□□□ -0.63
AC055716.2-201ENST00000552545 PIP4K2AP48426 406 aaPredicted RBP11.15□□□□□ -0.63
AC055716.2-201ENST00000552545 C20orf194Q5TEA3 1177 aa11.15□□□□□ -0.63
AC055716.2-201ENST00000552545 ZKSCAN2Q63HK3 967 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms