RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 ATG3Q9NT62 314 aa18.94■□□□□ 0.62
DDX54-210ENST00000552375 TAF1LQ8IZX4 1826 aa18.93■□□□□ 0.62
DDX54-210ENST00000552375 MSH5O43196 834 aa18.93■□□□□ 0.62
DDX54-210ENST00000552375 LINC00116Q8NCU8 138 aa18.92■□□□□ 0.62
DDX54-210ENST00000552375 DIAPH1O60610 1272 aaKnown RBP18.91■□□□□ 0.62
DDX54-210ENST00000552375 ITPK1Q13572 414 aa18.91■□□□□ 0.62
DDX54-210ENST00000552375 AMIGO3Q86WK7 504 aa18.91■□□□□ 0.62
DDX54-210ENST00000552375 ATP6V1AP38606 617 aa18.9■□□□□ 0.62
DDX54-210ENST00000552375 CABP4P57796 275 aa18.9■□□□□ 0.62
DDX54-210ENST00000552375 HMOX1P09601 288 aa18.89■□□□□ 0.61
DDX54-210ENST00000552375 SSFA2P28290 1259 aa18.89■□□□□ 0.61
DDX54-210ENST00000552375 MSL1Q68DK7 614 aa18.89■□□□□ 0.61
DDX54-210ENST00000552375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
DDX54-210ENST00000552375 PHF14O94880 888 aa18.88■□□□□ 0.61
DDX54-210ENST00000552375 DDX10Q13206 875 aaKnown RBP18.88■□□□□ 0.61
DDX54-210ENST00000552375 AKAP4Q5JQC9 854 aa18.88■□□□□ 0.61
DDX54-210ENST00000552375 MRC1P22897 1456 aa18.88■□□□□ 0.61
DDX54-210ENST00000552375 GNPATO15228 680 aa18.87■□□□□ 0.61
DDX54-210ENST00000552375 KLHL34Q8N239 644 aa18.87■□□□□ 0.61
DDX54-210ENST00000552375 SLC4A9Q96Q91 983 aa18.87■□□□□ 0.61
DDX54-210ENST00000552375 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
DDX54-210ENST00000552375 ZNF831Q5JPB2 1677 aa18.86■□□□□ 0.61
DDX54-210ENST00000552375 GOLGB1Q14789 3259 aaKnown RBP18.86■□□□□ 0.61
DDX54-210ENST00000552375 YY1P25490 414 aa18.85■□□□□ 0.61
DDX54-210ENST00000552375 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
DDX54-210ENST00000552375 CNTNAP4Q9C0A0 1308 aa18.84■□□□□ 0.61
DDX54-210ENST00000552375 MTHFSDQ2M296 383 aaKnown RBP18.83■□□□□ 0.6
DDX54-210ENST00000552375 SMIM5Q71RC9 77 aa18.83■□□□□ 0.6
DDX54-210ENST00000552375 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
DDX54-210ENST00000552375 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
DDX54-210ENST00000552375 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
DDX54-210ENST00000552375 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
DDX54-210ENST00000552375 SCN11AQ9UI33 1791 aa18.82■□□□□ 0.6
DDX54-210ENST00000552375 PPP2R1AP30153 589 aa18.81■□□□□ 0.6
DDX54-210ENST00000552375 CFAP53Q96M91 514 aa18.81■□□□□ 0.6
DDX54-210ENST00000552375 ADAMTS7Q9UKP4 1686 aa18.81■□□□□ 0.6
DDX54-210ENST00000552375 CICQ96RK0 1608 aaPredicted RBP18.81■□□□□ 0.6
DDX54-210ENST00000552375 COL5A3P25940 1745 aaPredicted RBP18.8■□□□□ 0.6
DDX54-210ENST00000552375 RNMTO43148 476 aaKnown RBP18.8■□□□□ 0.6
DDX54-210ENST00000552375 PTCD1O75127 700 aaKnown RBP18.8■□□□□ 0.6
DDX54-210ENST00000552375 ADRA2BP18089 450 aa18.8■□□□□ 0.6
DDX54-210ENST00000552375 RC3H1Q5TC82 1133 aaKnown RBP18.8■□□□□ 0.6
DDX54-210ENST00000552375 RTCBQ9Y3I0 505 aaKnown RBP18.8■□□□□ 0.6
DDX54-210ENST00000552375 LGR6Q9HBX8 967 aa18.79■□□□□ 0.6
DDX54-210ENST00000552375 GAS2L2Q8NHY3 880 aa18.78■□□□□ 0.6
DDX54-210ENST00000552375 CD2APQ9Y5K6 639 aa18.78■□□□□ 0.6
DDX54-210ENST00000552375 GPR162Q16538 588 aa18.77■□□□□ 0.6
DDX54-210ENST00000552375 TJP1Q07157 1748 aa18.77■□□□□ 0.59
DDX54-210ENST00000552375 KCPQ6ZWJ8 1503 aa18.76■□□□□ 0.59
DDX54-210ENST00000552375 RPS6KA4O75676 772 aa18.76■□□□□ 0.59
DDX54-210ENST00000552375 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
DDX54-210ENST00000552375 TRAPPC3LQ5T215 181 aa18.76■□□□□ 0.59
DDX54-210ENST00000552375 RSPH6AQ9H0K4 717 aa18.75■□□□□ 0.59
DDX54-210ENST00000552375 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
DDX54-210ENST00000552375 PRKAR2BP31323 418 aa18.74■□□□□ 0.59
DDX54-210ENST00000552375 PELP1Q8IZL8 1130 aaKnown RBP18.74■□□□□ 0.59
DDX54-210ENST00000552375 ARHGEF1Q92888 912 aaKnown RBP18.74■□□□□ 0.59
DDX54-210ENST00000552375 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
DDX54-210ENST00000552375 MMP10P09238 476 aa18.73■□□□□ 0.59
DDX54-210ENST00000552375 SLC39A6Q13433 755 aa18.73■□□□□ 0.59
DDX54-210ENST00000552375 GNAT3A8MTJ3 354 aa18.72■□□□□ 0.59
DDX54-210ENST00000552375 RFC4P35249 363 aa18.72■□□□□ 0.59
DDX54-210ENST00000552375 DNAJC10Q8IXB1 793 aa18.72■□□□□ 0.59
DDX54-210ENST00000552375 CEMIPQ8WUJ3 1361 aa18.71■□□□□ 0.59
DDX54-210ENST00000552375 ZNF316A6NFI3 1004 aaPredicted RBP18.71■□□□□ 0.59
DDX54-210ENST00000552375 U2AF1L5P0DN76 240 aaPredicted RBP18.71■□□□□ 0.59
DDX54-210ENST00000552375 GYS1P13807 737 aa18.71■□□□□ 0.59
DDX54-210ENST00000552375 YBX3P16989 372 aaKnown RBP eCLIP18.71■□□□□ 0.591e-6■□□□□ 11
DDX54-210ENST00000552375 U2AF1Q01081 240 aaKnown RBP eCLIP18.71■□□□□ 0.59
DDX54-210ENST00000552375 NLGN1Q8N2Q7 840 aa18.71■□□□□ 0.59
DDX54-210ENST00000552375 MYH14Q7Z406 1995 aaKnown RBP18.71■□□□□ 0.59
DDX54-210ENST00000552375 C4AP0C0L4 1744 aa18.71■□□□□ 0.59
DDX54-210ENST00000552375 TEFQ10587 303 aa18.7■□□□□ 0.58
DDX54-210ENST00000552375 INTS5Q6P9B9 1019 aaKnown RBP18.7■□□□□ 0.58
DDX54-210ENST00000552375 C10orf71Q711Q0 1435 aa18.7■□□□□ 0.58
DDX54-210ENST00000552375 VSIG10Q8N0Z9 540 aa18.7■□□□□ 0.58
DDX54-210ENST00000552375 IL17REQ8NFR9 667 aa18.7■□□□□ 0.58
DDX54-210ENST00000552375 PHACTR3Q96KR7 559 aa18.7■□□□□ 0.58
DDX54-210ENST00000552375 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
DDX54-210ENST00000552375 GRIN3BO60391 1043 aa18.69■□□□□ 0.58
DDX54-210ENST00000552375 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
DDX54-210ENST00000552375 CCDC87Q9NVE4 849 aa18.69■□□□□ 0.58
DDX54-210ENST00000552375 SOS1Q07889 1333 aaPredicted RBP18.69■□□□□ 0.58
DDX54-210ENST00000552375 SIPA1L3O60292 1781 aaPredicted RBP18.68■□□□□ 0.58
DDX54-210ENST00000552375 UBR2Q8IWV8 1755 aa18.68■□□□□ 0.58
DDX54-210ENST00000552375 CYP19A1P11511 503 aaPredicted RBP18.68■□□□□ 0.58
DDX54-210ENST00000552375 FCHSD2O94868 740 aa18.67■□□□□ 0.58
DDX54-210ENST00000552375 RALBP1Q15311 655 aa18.67■□□□□ 0.58
DDX54-210ENST00000552375 ZNF784Q8NCA9 323 aaPredicted RBP18.67■□□□□ 0.58
DDX54-210ENST00000552375 PXDNLA1KZ92 1463 aa18.66■□□□□ 0.58
DDX54-210ENST00000552375 SRP68Q9UHB9 627 aaKnown RBP18.66■□□□□ 0.58
DDX54-210ENST00000552375 ZBTB1Q9Y2K1 713 aa18.66■□□□□ 0.58
DDX54-210ENST00000552375 ZNF790Q6PG37 636 aa18.65■□□□□ 0.58
DDX54-210ENST00000552375 MYBBP1AQ9BQG0 1328 aaKnown RBP18.65■□□□□ 0.58
DDX54-210ENST00000552375 COL15A1P39059 1388 aa18.65■□□□□ 0.58
DDX54-210ENST00000552375 FKBP8Q14318 412 aa18.64■□□□□ 0.57
DDX54-210ENST00000552375 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
DDX54-210ENST00000552375 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.57
DDX54-210ENST00000552375 CHD4Q14839 1912 aa18.64■□□□□ 0.57
DDX54-210ENST00000552375 HEG1Q9ULI3 1381 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms