RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 JMYQ8N9B5 988 aa12.33□□□□□ -0.44
CDK4-211ENST00000552254 SLC27A3Q5K4L6 730 aa12.32□□□□□ -0.44
CDK4-211ENST00000552254 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
CDK4-211ENST00000552254 AEBP1Q8IUX7 1158 aa12.31□□□□□ -0.44
CDK4-211ENST00000552254 CFAP53Q96M91 514 aa12.31□□□□□ -0.44
CDK4-211ENST00000552254 PCDH11XQ9BZA7 1347 aa12.31□□□□□ -0.44
CDK4-211ENST00000552254 PCDH11YQ9BZA8 1340 aa12.31□□□□□ -0.44
CDK4-211ENST00000552254 KDRP35968 1356 aa12.3□□□□□ -0.44
CDK4-211ENST00000552254 VIRMAQ69YN4 1812 aaKnown RBP12.3□□□□□ -0.44
CDK4-211ENST00000552254 MSL1Q68DK7 614 aa12.3□□□□□ -0.44
CDK4-211ENST00000552254 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
CDK4-211ENST00000552254 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
CDK4-211ENST00000552254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDK4-211ENST00000552254 CCNL1Q9UK58 526 aaPredicted RBP12.3□□□□□ -0.44
CDK4-211ENST00000552254 ADCY9O60503 1353 aa12.3□□□□□ -0.44
CDK4-211ENST00000552254 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
CDK4-211ENST00000552254 SPG7Q9UQ90 795 aa12.29□□□□□ -0.44
CDK4-211ENST00000552254 TAF1LQ8IZX4 1826 aa12.28□□□□□ -0.44
CDK4-211ENST00000552254 HMOX1P09601 288 aa12.28□□□□□ -0.44
CDK4-211ENST00000552254 PRKRIP1Q9H875 184 aaPredicted RBP12.28□□□□□ -0.44
CDK4-211ENST00000552254 C5P01031 1676 aa12.28□□□□□ -0.44
CDK4-211ENST00000552254 U2SURPO15042 1029 aaKnown RBP12.27□□□□□ -0.45
CDK4-211ENST00000552254 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
CDK4-211ENST00000552254 KLRG1Q96E93 195 aa12.27□□□□□ -0.45
CDK4-211ENST00000552254 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.45
CDK4-211ENST00000552254 NUDCQ9Y266 331 aa12.26□□□□□ -0.45
CDK4-211ENST00000552254 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
CDK4-211ENST00000552254 KIF3CO14782 793 aa12.25□□□□□ -0.45
CDK4-211ENST00000552254 PHKG2P15735 406 aa12.25□□□□□ -0.45
CDK4-211ENST00000552254 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
CDK4-211ENST00000552254 AMOTQ4VCS5 1084 aa12.25□□□□□ -0.45
CDK4-211ENST00000552254 SMIM5Q71RC9 77 aa12.25□□□□□ -0.45
CDK4-211ENST00000552254 IFNL2Q8IZJ0 200 aa12.25□□□□□ -0.45
CDK4-211ENST00000552254 PIGBQ92521 554 aa12.25□□□□□ -0.45
CDK4-211ENST00000552254 CD2APQ9Y5K6 639 aa12.25□□□□□ -0.45
CDK4-211ENST00000552254 SCN11AQ9UI33 1791 aa12.25□□□□□ -0.45
CDK4-211ENST00000552254 FAM161AQ3B820 660 aa12.24□□□□□ -0.45
CDK4-211ENST00000552254 COL23A1Q86Y22 540 aaPredicted RBP12.24□□□□□ -0.45
CDK4-211ENST00000552254 C16orf71Q8IYS4 520 aaPredicted RBP12.24□□□□□ -0.45
CDK4-211ENST00000552254 U2AF1L5P0DN76 240 aaPredicted RBP12.23□□□□□ -0.45
CDK4-211ENST00000552254 U2AF1Q01081 240 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDK4-211ENST00000552254 ZNF530Q6P9A1 599 aaPredicted RBP12.23□□□□□ -0.45
CDK4-211ENST00000552254 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
CDK4-211ENST00000552254 DLG5Q8TDM6 1919 aa12.22□□□□□ -0.45
CDK4-211ENST00000552254 TOMM70O94826 608 aa12.22□□□□□ -0.45
CDK4-211ENST00000552254 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
CDK4-211ENST00000552254 RSPH6AQ9H0K4 717 aa12.22□□□□□ -0.45
CDK4-211ENST00000552254 TMOD3Q9NYL9 352 aa12.22□□□□□ -0.45
CDK4-211ENST00000552254 ASAP1Q9ULH1 1129 aa12.22□□□□□ -0.45
CDK4-211ENST00000552254 FCHSD2O94868 740 aa12.21□□□□□ -0.45
CDK4-211ENST00000552254 PRKAR2BP31323 418 aa12.21□□□□□ -0.45
CDK4-211ENST00000552254 MTHFSDQ2M296 383 aaKnown RBP12.21□□□□□ -0.45
CDK4-211ENST00000552254 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
CDK4-211ENST00000552254 ADAMTS7Q9UKP4 1686 aa12.2□□□□□ -0.46
CDK4-211ENST00000552254 HSP90AB1P08238 724 aaKnown RBP12.2□□□□□ -0.46
CDK4-211ENST00000552254 C1orf141Q5JVX7 400 aa12.2□□□□□ -0.46
CDK4-211ENST00000552254 SMARCC1Q92922 1105 aaPredicted RBP12.2□□□□□ -0.46
CDK4-211ENST00000552254 DCAF5Q96JK2 942 aa12.2□□□□□ -0.46
CDK4-211ENST00000552254 PHACTR3Q96KR7 559 aa12.2□□□□□ -0.46
CDK4-211ENST00000552254 KDM6AO15550 1401 aaPredicted RBP12.2□□□□□ -0.46
CDK4-211ENST00000552254 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
CDK4-211ENST00000552254 ANP32CO43423 234 aa12.19□□□□□ -0.46
CDK4-211ENST00000552254 PHF14O94880 888 aa12.19□□□□□ -0.46
CDK4-211ENST00000552254 SIK1P57059 783 aa12.19□□□□□ -0.46
CDK4-211ENST00000552254 AKAP4Q5JQC9 854 aa12.19□□□□□ -0.46
CDK4-211ENST00000552254 LINC00116Q8NCU8 138 aa12.19□□□□□ -0.46
CDK4-211ENST00000552254 FLAD1Q8NFF5 587 aa12.19□□□□□ -0.46
CDK4-211ENST00000552254 ATG3Q9NT62 314 aa12.19□□□□□ -0.46
CDK4-211ENST00000552254 ERVV-2B6SEH9 535 aa12.18□□□□□ -0.46
CDK4-211ENST00000552254 ITPK1Q13572 414 aa12.18□□□□□ -0.46
CDK4-211ENST00000552254 AK7Q96M32 723 aa12.18□□□□□ -0.46
CDK4-211ENST00000552254 HMGB2P26583 209 aaKnown RBP12.17□□□□□ -0.46
CDK4-211ENST00000552254 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
CDK4-211ENST00000552254 HTRA3P83110 453 aa12.17□□□□□ -0.46
CDK4-211ENST00000552254 GAS2L2Q8NHY3 880 aa12.17□□□□□ -0.46
CDK4-211ENST00000552254 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
CDK4-211ENST00000552254 CCDC184Q52MB2 194 aa12.16□□□□□ -0.46
CDK4-211ENST00000552254 SLC4A9Q96Q91 983 aa12.16□□□□□ -0.46
CDK4-211ENST00000552254 PLEKHF1Q96S99 279 aa12.16□□□□□ -0.46
CDK4-211ENST00000552254 RBM42Q9BTD8 480 aaKnown RBP12.16□□□□□ -0.46
CDK4-211ENST00000552254 LGR6Q9HBX8 967 aa12.16□□□□□ -0.46
CDK4-211ENST00000552254 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
CDK4-211ENST00000552254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.15□□□□□ -0.46
CDK4-211ENST00000552254 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.46
CDK4-211ENST00000552254 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.46
CDK4-211ENST00000552254 CABP4P57796 275 aa12.15□□□□□ -0.46
CDK4-211ENST00000552254 PNNQ9H307 717 aaKnown RBP12.15□□□□□ -0.46
CDK4-211ENST00000552254 NMRK2Q9NPI5 230 aa12.15□□□□□ -0.46
CDK4-211ENST00000552254 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
CDK4-211ENST00000552254 TNRC18O15417 2968 aaPredicted RBP12.14□□□□□ -0.47
CDK4-211ENST00000552254 GNPATO15228 680 aa12.14□□□□□ -0.47
CDK4-211ENST00000552254 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDK4-211ENST00000552254 NFATC2IPQ8NCF5 419 aa12.14□□□□□ -0.47
CDK4-211ENST00000552254 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
CDK4-211ENST00000552254 MRC1P22897 1456 aa12.14□□□□□ -0.47
CDK4-211ENST00000552254 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
CDK4-211ENST00000552254 NEFMP07197 916 aa12.13□□□□□ -0.47
CDK4-211ENST00000552254 HSPA1AP0DMV8 641 aaKnown RBP12.13□□□□□ -0.47
CDK4-211ENST00000552254 HSPA1BP0DMV9 641 aaKnown RBP12.13□□□□□ -0.47
CDK4-211ENST00000552254 IL17REQ8NFR9 667 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms