RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 RIPK4P57078 832 aa24.61■■□□□ 1.53
DDX54-209ENST00000551912 MCM10Q7L590 875 aa24.61■■□□□ 1.53
DDX54-209ENST00000551912 PROM2Q8N271 834 aa24.61■■□□□ 1.53
DDX54-209ENST00000551912 ASAP1Q9ULH1 1129 aa24.61■■□□□ 1.53
DDX54-209ENST00000551912 PALLDQ8WX93 1383 aa24.61■■□□□ 1.53
DDX54-209ENST00000551912 DLG5Q8TDM6 1919 aa24.61■■□□□ 1.53
DDX54-209ENST00000551912 FAM9BQ8IZU0 186 aa24.6■■□□□ 1.53
DDX54-209ENST00000551912 MIER1Q8N108 512 aa24.6■■□□□ 1.53
DDX54-209ENST00000551912 ATG3Q9NT62 314 aa24.6■■□□□ 1.53
DDX54-209ENST00000551912 RREB1Q92766 1687 aa24.59■■□□□ 1.53
DDX54-209ENST00000551912 DCTN1Q14203 1278 aa24.59■■□□□ 1.53
DDX54-209ENST00000551912 RRP7AQ9Y3A4 280 aaKnown RBP24.59■■□□□ 1.53
DDX54-209ENST00000551912 LMOD3Q0VAK6 560 aa24.58■■□□□ 1.53
DDX54-209ENST00000551912 NEUROD2Q15784 382 aa24.58■■□□□ 1.53
DDX54-209ENST00000551912 LY75O60449 1722 aa24.58■■□□□ 1.52
DDX54-209ENST00000551912 APAF1O14727 1248 aa24.57■■□□□ 1.52
DDX54-209ENST00000551912 SLC27A3Q5K4L6 730 aa24.57■■□□□ 1.52
DDX54-209ENST00000551912 CCNL1Q9UK58 526 aaPredicted RBP24.56■■□□□ 1.52
DDX54-209ENST00000551912 NUP188Q5SRE5 1749 aa24.55■■□□□ 1.52
DDX54-209ENST00000551912 LRRC4BQ9NT99 713 aa24.54■■□□□ 1.52
DDX54-209ENST00000551912 SIPA1L3O60292 1781 aaPredicted RBP24.53■■□□□ 1.52
DDX54-209ENST00000551912 LOC102724428A0A0B4J2F2 783 aa24.53■■□□□ 1.52
DDX54-209ENST00000551912 SIK1P57059 783 aa24.53■■□□□ 1.52
DDX54-209ENST00000551912 KCNQ4P56696 695 aa24.52■■□□□ 1.52
DDX54-209ENST00000551912 SLC39A6Q13433 755 aa24.52■■□□□ 1.52
DDX54-209ENST00000551912 NBPF14Q5TI25 921 aa24.52■■□□□ 1.52
DDX54-209ENST00000551912 THUMPD2Q9BTF0 503 aaKnown RBP24.52■■□□□ 1.52
DDX54-209ENST00000551912 BTBD11A6QL63 1104 aa24.51■■□□□ 1.51
DDX54-209ENST00000551912 RBM42Q9BTD8 480 aaKnown RBP24.51■■□□□ 1.51
DDX54-209ENST00000551912 TRIM35Q9UPQ4 493 aa24.51■■□□□ 1.51
DDX54-209ENST00000551912 PAPPAQ13219 1627 aa24.5■■□□□ 1.51
DDX54-209ENST00000551912 PTCD1O75127 700 aaKnown RBP24.5■■□□□ 1.51
DDX54-209ENST00000551912 HMGB2P26583 209 aaKnown RBP24.5■■□□□ 1.51
DDX54-209ENST00000551912 TAF7Q15545 349 aaPredicted RBP24.5■■□□□ 1.51
DDX54-209ENST00000551912 TTC5Q8N0Z6 440 aa24.5■■□□□ 1.51
DDX54-209ENST00000551912 ZNF790Q6PG37 636 aa24.49■■□□□ 1.51
DDX54-209ENST00000551912 ATP6V1AP38606 617 aa24.48■■□□□ 1.51
DDX54-209ENST00000551912 SLC4A9Q96Q91 983 aa24.46■■□□□ 1.51
DDX54-209ENST00000551912 ANO8Q9HCE9 1232 aaPredicted RBP24.46■■□□□ 1.51
DDX54-209ENST00000551912 STK32BQ9NY57 414 aa24.46■■□□□ 1.51
DDX54-209ENST00000551912 KCPQ6ZWJ8 1503 aa24.45■■□□□ 1.5
DDX54-209ENST00000551912 ZNF831Q5JPB2 1677 aa24.44■■□□□ 1.5
DDX54-209ENST00000551912 SENP3-EIF4A1A0A087X0R7 540 aa24.44■■□□□ 1.5
DDX54-209ENST00000551912 ITPK1Q13572 414 aa24.44■■□□□ 1.5
DDX54-209ENST00000551912 NCBP3Q53F19 620 aaKnown RBP24.44■■□□□ 1.5
DDX54-209ENST00000551912 UBR2Q8IWV8 1755 aa24.44■■□□□ 1.5
DDX54-209ENST00000551912 C5P01031 1676 aa24.43■■□□□ 1.5
DDX54-209ENST00000551912 KCNQ3O43525 872 aa24.43■■□□□ 1.5
DDX54-209ENST00000551912 SLC15A2Q16348 729 aa24.43■■□□□ 1.5
DDX54-209ENST00000551912 ZNF496Q96IT1 587 aaPredicted RBP24.43■■□□□ 1.5
DDX54-209ENST00000551912 MIS18AQ9NYP9 233 aa24.43■■□□□ 1.5
DDX54-209ENST00000551912 TAF1LQ8IZX4 1826 aa24.42■■□□□ 1.5
DDX54-209ENST00000551912 R3HDM1Q15032 1099 aaKnown RBP24.42■■□□□ 1.5
DDX54-209ENST00000551912 CCDC27Q2M243 656 aa24.42■■□□□ 1.5
DDX54-209ENST00000551912 VSIG10Q8N0Z9 540 aa24.42■■□□□ 1.5
DDX54-209ENST00000551912 LINC00116Q8NCU8 138 aa24.42■■□□□ 1.5
DDX54-209ENST00000551912 AKT1S1Q96B36 256 aa24.42■■□□□ 1.5
DDX54-209ENST00000551912 FMNL2Q96PY5 1086 aa24.42■■□□□ 1.5
DDX54-209ENST00000551912 CALD1Q05682 793 aaKnown RBP24.41■■□□□ 1.5
DDX54-209ENST00000551912 ZNF827Q17R98 1081 aa24.41■■□□□ 1.5
DDX54-209ENST00000551912 BABAM1Q9NWV8 329 aa24.41■■□□□ 1.5
DDX54-209ENST00000551912 TSPYL4Q9UJ04 414 aa24.41■■□□□ 1.5
DDX54-209ENST00000551912 PSDA5PKW4 1024 aaPredicted RBP24.4■■□□□ 1.5
DDX54-209ENST00000551912 HEG1Q9ULI3 1381 aa24.4■■□□□ 1.5
DDX54-209ENST00000551912 NGEFQ8N5V2 710 aa24.39■■□□□ 1.49
DDX54-209ENST00000551912 C4BP0C0L5 1744 aa24.38■■□□□ 1.49
DDX54-209ENST00000551912 WWC1Q8IX03 1113 aa24.38■■□□□ 1.49
DDX54-209ENST00000551912 DNAJC10Q8IXB1 793 aa24.38■■□□□ 1.49
DDX54-209ENST00000551912 AK7Q96M32 723 aa24.38■■□□□ 1.49
DDX54-209ENST00000551912 TFCP2L1Q9NZI6 479 aa24.38■■□□□ 1.49
DDX54-209ENST00000551912 SALL2Q9Y467 1007 aaPredicted RBP24.38■■□□□ 1.49
DDX54-209ENST00000551912 LAS1LQ9Y4W2 734 aaKnown RBP24.38■■□□□ 1.49
DDX54-209ENST00000551912 KDM3BQ7LBC6 1761 aa24.38■■□□□ 1.49
DDX54-209ENST00000551912 CICQ96RK0 1608 aaPredicted RBP24.38■■□□□ 1.49
DDX54-209ENST00000551912 TJP1Q07157 1748 aa24.37■■□□□ 1.49
DDX54-209ENST00000551912 COL5A3P25940 1745 aaPredicted RBP24.36■■□□□ 1.49
DDX54-209ENST00000551912 CHL1O00533 1208 aa24.36■■□□□ 1.49
DDX54-209ENST00000551912 CFAP44Q96MT7 982 aa24.36■■□□□ 1.49
DDX54-209ENST00000551912 TEX13AQ9BXU3 409 aaPredicted RBP24.35■■□□□ 1.49
DDX54-209ENST00000551912 CNTNAP4Q9C0A0 1308 aa24.35■■□□□ 1.49
DDX54-209ENST00000551912 SNRPA1P09661 255 aaKnown RBP24.34■■□□□ 1.49
DDX54-209ENST00000551912 EIF4A1P60842 406 aaKnown RBP24.34■■□□□ 1.49
DDX54-209ENST00000551912 RC3H1Q5TC82 1133 aaKnown RBP24.34■■□□□ 1.49
DDX54-209ENST00000551912 IFT57Q9NWB7 429 aa24.34■■□□□ 1.49
DDX54-209ENST00000551912 STARD3NLO95772 234 aa24.33■■□□□ 1.49
DDX54-209ENST00000551912 CRKLP46109 303 aaKnown RBP24.33■■□□□ 1.49
DDX54-209ENST00000551912 GNAI1P63096 354 aa24.33■■□□□ 1.49
DDX54-209ENST00000551912 GNPATO15228 680 aa24.32■■□□□ 1.48
DDX54-209ENST00000551912 ZNF853P0CG23 659 aa24.32■■□□□ 1.48
DDX54-209ENST00000551912 CYP19A1P11511 503 aaPredicted RBP24.32■■□□□ 1.48
DDX54-209ENST00000551912 WDR63Q8IWG1 891 aa24.31■■□□□ 1.48
DDX54-209ENST00000551912 PNPLA7Q6ZV29 1317 aa24.31■■□□□ 1.48
DDX54-209ENST00000551912 FLAD1Q8NFF5 587 aa24.3■■□□□ 1.48
DDX54-209ENST00000551912 MBIPQ9NS73 344 aa24.3■■□□□ 1.48
DDX54-209ENST00000551912 CCDC87Q9NVE4 849 aa24.3■■□□□ 1.48
DDX54-209ENST00000551912 IL16Q14005 1332 aa24.3■■□□□ 1.48
DDX54-209ENST00000551912 QSER1Q2KHR3 1735 aa24.3■■□□□ 1.48
DDX54-209ENST00000551912 MYH14Q7Z406 1995 aaKnown RBP24.29■■□□□ 1.48
DDX54-209ENST00000551912 TUBGCP6Q96RT7 1819 aa24.29■■□□□ 1.48
DDX54-209ENST00000551912 PRAMEF22A3QJZ6 481 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms