RNA–Protein interactions for RNA: ENST00000551899.5

CCT2-213, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 4

Gene CCT2, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-213ENST00000551899 SSFA2P28290 1259 aa17.52■□□□□ 0.4
CCT2-213ENST00000551899 NPC1L1Q9UHC9 1359 aa17.52■□□□□ 0.39
CCT2-213ENST00000551899 IL13P35225 146 aa17.51■□□□□ 0.39
CCT2-213ENST00000551899 SULT6B1Q6IMI4 303 aa17.51■□□□□ 0.39
CCT2-213ENST00000551899 KLHL34Q8N239 644 aa17.51■□□□□ 0.39
CCT2-213ENST00000551899 ASAP1Q9ULH1 1129 aa17.51■□□□□ 0.39
CCT2-213ENST00000551899 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
CCT2-213ENST00000551899 ATP6V1AP38606 617 aa17.5■□□□□ 0.39
CCT2-213ENST00000551899 ATG3Q9NT62 314 aa17.5■□□□□ 0.39
CCT2-213ENST00000551899 MTHFSP49914 203 aa17.49■□□□□ 0.39
CCT2-213ENST00000551899 CABP4P57796 275 aa17.49■□□□□ 0.39
CCT2-213ENST00000551899 GPR162Q16538 588 aa17.49■□□□□ 0.39
CCT2-213ENST00000551899 KDM6AO15550 1401 aaPredicted RBP17.48■□□□□ 0.39
CCT2-213ENST00000551899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.48■□□□□ 0.39
CCT2-213ENST00000551899 AEBP1Q8IUX7 1158 aa17.48■□□□□ 0.39
CCT2-213ENST00000551899 LINC00116Q8NCU8 138 aa17.48■□□□□ 0.39
CCT2-213ENST00000551899 MSL1Q68DK7 614 aa17.47■□□□□ 0.39
CCT2-213ENST00000551899 SCN11AQ9UI33 1791 aa17.47■□□□□ 0.39
CCT2-213ENST00000551899 GNPATO15228 680 aa17.46■□□□□ 0.39
CCT2-213ENST00000551899 PHF14O94880 888 aa17.46■□□□□ 0.39
CCT2-213ENST00000551899 CC2D1BQ5T0F9 858 aaKnown RBP17.46■□□□□ 0.39
CCT2-213ENST00000551899 CD2APQ9Y5K6 639 aa17.46■□□□□ 0.39
CCT2-213ENST00000551899 COL5A3P25940 1745 aaPredicted RBP17.45■□□□□ 0.38
CCT2-213ENST00000551899 DIAPH1O60610 1272 aaKnown RBP17.45■□□□□ 0.38
CCT2-213ENST00000551899 ITPK1Q13572 414 aa17.45■□□□□ 0.38
CCT2-213ENST00000551899 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
CCT2-213ENST00000551899 RC3H1Q5TC82 1133 aaKnown RBP17.44■□□□□ 0.38
CCT2-213ENST00000551899 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
CCT2-213ENST00000551899 RTCBQ9Y3I0 505 aaKnown RBP17.44■□□□□ 0.38
CCT2-213ENST00000551899 CNTNAP4Q9C0A0 1308 aa17.44■□□□□ 0.38
CCT2-213ENST00000551899 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
CCT2-213ENST00000551899 NLGN2Q8NFZ4 835 aa17.43■□□□□ 0.38
CCT2-213ENST00000551899 VIRMAQ69YN4 1812 aaKnown RBP17.42■□□□□ 0.38
CCT2-213ENST00000551899 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
CCT2-213ENST00000551899 CICQ96RK0 1608 aaPredicted RBP17.42■□□□□ 0.38
CCT2-213ENST00000551899 TRAPPC3LQ5T215 181 aa17.41■□□□□ 0.38
CCT2-213ENST00000551899 AMIGO3Q86WK7 504 aa17.41■□□□□ 0.38
CCT2-213ENST00000551899 MRC1P22897 1456 aa17.4■□□□□ 0.38
CCT2-213ENST00000551899 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
CCT2-213ENST00000551899 HMOX1P09601 288 aa17.39■□□□□ 0.37
CCT2-213ENST00000551899 SLC4A9Q96Q91 983 aa17.39■□□□□ 0.37
CCT2-213ENST00000551899 RPS6KA4O75676 772 aa17.38■□□□□ 0.37
CCT2-213ENST00000551899 NLGN1Q8N2Q7 840 aa17.38■□□□□ 0.37
CCT2-213ENST00000551899 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
CCT2-213ENST00000551899 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
CCT2-213ENST00000551899 SLC52A2Q9HAB3 445 aa17.38■□□□□ 0.37
CCT2-213ENST00000551899 MYH14Q7Z406 1995 aaKnown RBP17.38■□□□□ 0.37
CCT2-213ENST00000551899 ADAMTS7Q9UKP4 1686 aa17.38■□□□□ 0.37
CCT2-213ENST00000551899 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
CCT2-213ENST00000551899 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
CCT2-213ENST00000551899 RNMTO43148 476 aaKnown RBP17.36■□□□□ 0.37
CCT2-213ENST00000551899 RFC4P35249 363 aa17.36■□□□□ 0.37
CCT2-213ENST00000551899 SMIM5Q71RC9 77 aa17.36■□□□□ 0.37
CCT2-213ENST00000551899 C4AP0C0L4 1744 aa17.35■□□□□ 0.37
CCT2-213ENST00000551899 TJP1Q07157 1748 aa17.35■□□□□ 0.37
CCT2-213ENST00000551899 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
CCT2-213ENST00000551899 MTHFSDQ2M296 383 aaKnown RBP17.35■□□□□ 0.37
CCT2-213ENST00000551899 GAS2L2Q8NHY3 880 aa17.35■□□□□ 0.37
CCT2-213ENST00000551899 ARHGEF1Q92888 912 aaKnown RBP17.35■□□□□ 0.37
CCT2-213ENST00000551899 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
CCT2-213ENST00000551899 UTRNP46939 3433 aa17.34■□□□□ 0.37
CCT2-213ENST00000551899 MMP10P09238 476 aa17.34■□□□□ 0.37
CCT2-213ENST00000551899 YBX3P16989 372 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCT2-213ENST00000551899 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
CCT2-213ENST00000551899 LGR6Q9HBX8 967 aa17.33■□□□□ 0.36
CCT2-213ENST00000551899 NUDCQ9Y266 331 aa17.33■□□□□ 0.36
CCT2-213ENST00000551899 CNGB1Q14028 1251 aaPredicted RBP17.32■□□□□ 0.36
CCT2-213ENST00000551899 GYS1P13807 737 aa17.31■□□□□ 0.36
CCT2-213ENST00000551899 VSIG10Q8N0Z9 540 aa17.31■□□□□ 0.36
CCT2-213ENST00000551899 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
CCT2-213ENST00000551899 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
CCT2-213ENST00000551899 UBR2Q8IWV8 1755 aa17.3■□□□□ 0.36
CCT2-213ENST00000551899 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
CCT2-213ENST00000551899 TGFB2P61812 414 aa17.3■□□□□ 0.36
CCT2-213ENST00000551899 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
CCT2-213ENST00000551899 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
CCT2-213ENST00000551899 KCPQ6ZWJ8 1503 aa17.29■□□□□ 0.36
CCT2-213ENST00000551899 C10orf71Q711Q0 1435 aa17.29■□□□□ 0.36
CCT2-213ENST00000551899 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
CCT2-213ENST00000551899 TEFQ10587 303 aa17.28■□□□□ 0.36
CCT2-213ENST00000551899 INTS5Q6P9B9 1019 aaKnown RBP17.28■□□□□ 0.36
CCT2-213ENST00000551899 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
CCT2-213ENST00000551899 GOLGB1Q14789 3259 aaKnown RBP17.28■□□□□ 0.36
CCT2-213ENST00000551899 ZPR1O75312 459 aa17.27■□□□□ 0.36
CCT2-213ENST00000551899 SLC39A6Q13433 755 aa17.27■□□□□ 0.36
CCT2-213ENST00000551899 SIPA1L3O60292 1781 aaPredicted RBP17.27■□□□□ 0.35
CCT2-213ENST00000551899 SOS1Q07889 1333 aaPredicted RBP17.26■□□□□ 0.35
CCT2-213ENST00000551899 PXDNLA1KZ92 1463 aa17.26■□□□□ 0.35
CCT2-213ENST00000551899 CYP19A1P11511 503 aaPredicted RBP17.26■□□□□ 0.35
CCT2-213ENST00000551899 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
CCT2-213ENST00000551899 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
CCT2-213ENST00000551899 KIAA1551Q9HCM1 1747 aa17.25■□□□□ 0.35
CCT2-213ENST00000551899 STARD3NLO95772 234 aa17.25■□□□□ 0.35
CCT2-213ENST00000551899 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
CCT2-213ENST00000551899 TEX13AQ9BXU3 409 aaPredicted RBP17.25■□□□□ 0.35
CCT2-213ENST00000551899 RSPH6AQ9H0K4 717 aa17.25■□□□□ 0.35
CCT2-213ENST00000551899 N4BP2Q86UW6 1770 aaPredicted RBP17.25■□□□□ 0.35
CCT2-213ENST00000551899 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
CCT2-213ENST00000551899 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCT2-213ENST00000551899 COL15A1P39059 1388 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 324.6 ms