RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 QSER1Q2KHR3 1735 aa13.22□□□□□ -0.29
GCN1-208ENST00000551549 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
GCN1-208ENST00000551549 KDRP35968 1356 aa13.21□□□□□ -0.29
GCN1-208ENST00000551549 CABP4P57796 275 aa13.21□□□□□ -0.29
GCN1-208ENST00000551549 C1orf141Q5JVX7 400 aa13.21□□□□□ -0.29
GCN1-208ENST00000551549 FLAD1Q8NFF5 587 aa13.21□□□□□ -0.29
GCN1-208ENST00000551549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
GCN1-208ENST00000551549 HMOX1P09601 288 aa13.2□□□□□ -0.3
GCN1-208ENST00000551549 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
GCN1-208ENST00000551549 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
GCN1-208ENST00000551549 C5P01031 1676 aa13.2□□□□□ -0.3
GCN1-208ENST00000551549 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
GCN1-208ENST00000551549 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
GCN1-208ENST00000551549 GNPATO15228 680 aa13.18□□□□□ -0.3
GCN1-208ENST00000551549 SSFA2P28290 1259 aa13.18□□□□□ -0.3
GCN1-208ENST00000551549 GPR162Q16538 588 aa13.18□□□□□ -0.3
GCN1-208ENST00000551549 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
GCN1-208ENST00000551549 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
GCN1-208ENST00000551549 NPC1L1Q9UHC9 1359 aa13.18□□□□□ -0.3
GCN1-208ENST00000551549 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
GCN1-208ENST00000551549 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
GCN1-208ENST00000551549 LGR6Q9HBX8 967 aa13.17□□□□□ -0.3
GCN1-208ENST00000551549 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
GCN1-208ENST00000551549 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
GCN1-208ENST00000551549 PELP1Q8IZL8 1130 aaKnown RBP13.16□□□□□ -0.3
GCN1-208ENST00000551549 MTHFSDQ2M296 383 aaKnown RBP13.15□□□□□ -0.3
GCN1-208ENST00000551549 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
GCN1-208ENST00000551549 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
GCN1-208ENST00000551549 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
GCN1-208ENST00000551549 YBX3P16989 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
GCN1-208ENST00000551549 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
GCN1-208ENST00000551549 RC3H1Q5TC82 1133 aaKnown RBP13.13□□□□□ -0.31
GCN1-208ENST00000551549 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
GCN1-208ENST00000551549 RTCBQ9Y3I0 505 aaKnown RBP13.13□□□□□ -0.31
GCN1-208ENST00000551549 CD2APQ9Y5K6 639 aa13.13□□□□□ -0.31
GCN1-208ENST00000551549 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
GCN1-208ENST00000551549 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
GCN1-208ENST00000551549 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
GCN1-208ENST00000551549 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
GCN1-208ENST00000551549 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
GCN1-208ENST00000551549 ZNF784Q8NCA9 323 aaPredicted RBP13.11□□□□□ -0.31
GCN1-208ENST00000551549 MMP10P09238 476 aa13.1□□□□□ -0.31
GCN1-208ENST00000551549 PPP2R1AP30153 589 aa13.1□□□□□ -0.31
GCN1-208ENST00000551549 CRKLP46109 303 aaKnown RBP13.1□□□□□ -0.31
GCN1-208ENST00000551549 GYS1P13807 737 aa13.09□□□□□ -0.31
GCN1-208ENST00000551549 ADRA2BP18089 450 aa13.09□□□□□ -0.31
GCN1-208ENST00000551549 RFC4P35249 363 aa13.09□□□□□ -0.31
GCN1-208ENST00000551549 INTS5Q6P9B9 1019 aaKnown RBP13.09□□□□□ -0.31
GCN1-208ENST00000551549 DNAJC10Q8IXB1 793 aa13.09□□□□□ -0.31
GCN1-208ENST00000551549 GRIN3BO60391 1043 aa13.08□□□□□ -0.32
GCN1-208ENST00000551549 IL17REQ8NFR9 667 aa13.08□□□□□ -0.32
GCN1-208ENST00000551549 PHACTR3Q96KR7 559 aa13.08□□□□□ -0.32
GCN1-208ENST00000551549 CFAP53Q96M91 514 aa13.08□□□□□ -0.32
GCN1-208ENST00000551549 WWC3Q9ULE0 1092 aa13.08□□□□□ -0.32
GCN1-208ENST00000551549 NLGN1Q8N2Q7 840 aa13.07□□□□□ -0.32
GCN1-208ENST00000551549 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
GCN1-208ENST00000551549 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
GCN1-208ENST00000551549 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
GCN1-208ENST00000551549 ZNF831Q5JPB2 1677 aa13.06□□□□□ -0.32
GCN1-208ENST00000551549 MRC1P22897 1456 aa13.06□□□□□ -0.32
GCN1-208ENST00000551549 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
GCN1-208ENST00000551549 CYP19A1P11511 503 aaPredicted RBP13.06□□□□□ -0.32
GCN1-208ENST00000551549 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
GCN1-208ENST00000551549 MYH14Q7Z406 1995 aaKnown RBP13.06□□□□□ -0.32
GCN1-208ENST00000551549 SCN11AQ9UI33 1791 aa13.06□□□□□ -0.32
GCN1-208ENST00000551549 CEP350Q5VT06 3117 aa13.06□□□□□ -0.32
GCN1-208ENST00000551549 U2AF1L5P0DN76 240 aaPredicted RBP13.05□□□□□ -0.32
GCN1-208ENST00000551549 U2AF1Q01081 240 aaKnown RBP eCLIP13.05□□□□□ -0.32
GCN1-208ENST00000551549 FKBP8Q14318 412 aa13.05□□□□□ -0.32
GCN1-208ENST00000551549 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
GCN1-208ENST00000551549 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
GCN1-208ENST00000551549 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
GCN1-208ENST00000551549 USP42Q9H9J4 1324 aaKnown RBP13.04□□□□□ -0.32
GCN1-208ENST00000551549 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
GCN1-208ENST00000551549 TEFQ10587 303 aa13.03□□□□□ -0.32
GCN1-208ENST00000551549 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
GCN1-208ENST00000551549 ZBTB1Q9Y2K1 713 aa13.03□□□□□ -0.32
GCN1-208ENST00000551549 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
GCN1-208ENST00000551549 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
GCN1-208ENST00000551549 TJP1Q07157 1748 aa13.02□□□□□ -0.32
GCN1-208ENST00000551549 CHD4Q14839 1912 aa13.02□□□□□ -0.32
GCN1-208ENST00000551549 A0A0G2JLW4 131 aa13.02□□□□□ -0.33
GCN1-208ENST00000551549 DDR1Q08345 913 aa13.02□□□□□ -0.33
GCN1-208ENST00000551549 ZNF790Q6PG37 636 aa13.02□□□□□ -0.33
GCN1-208ENST00000551549 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
GCN1-208ENST00000551549 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
GCN1-208ENST00000551549 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.33
GCN1-208ENST00000551549 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.33
GCN1-208ENST00000551549 KCNQ3O43525 872 aa13.01□□□□□ -0.33
GCN1-208ENST00000551549 ZPR1O75312 459 aa13.01□□□□□ -0.33
GCN1-208ENST00000551549 FCHSD2O94868 740 aa13.01□□□□□ -0.33
GCN1-208ENST00000551549 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
GCN1-208ENST00000551549 TGFB2P61812 414 aa13.01□□□□□ -0.33
GCN1-208ENST00000551549 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
GCN1-208ENST00000551549 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
GCN1-208ENST00000551549 PXDNLA1KZ92 1463 aa13□□□□□ -0.33
GCN1-208ENST00000551549 C10orf71Q711Q0 1435 aa13□□□□□ -0.33
GCN1-208ENST00000551549 DPEP1P16444 411 aa13□□□□□ -0.33
GCN1-208ENST00000551549 TM4SF1P30408 202 aa13□□□□□ -0.33
GCN1-208ENST00000551549 MCM10Q7L590 875 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms