RNA–Protein interactions for RNA: ENST00000549976.1

AC016954.1-201, humanhuman

BASIC

Gene AC016954.1, Length 745 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016954.1-201ENST00000549976 ATP6V1AP38606 617 aa11.87□□□□□ -0.51
AC016954.1-201ENST00000549976 NMRK2Q9NPI5 230 aa11.87□□□□□ -0.51
AC016954.1-201ENST00000549976 TMOD3Q9NYL9 352 aa11.87□□□□□ -0.51
AC016954.1-201ENST00000549976 SPG7Q9UQ90 795 aa11.87□□□□□ -0.51
AC016954.1-201ENST00000549976 BCS1LQ9Y276 419 aa11.87□□□□□ -0.51
AC016954.1-201ENST00000549976 ARHGAP27Q6ZUM4 889 aa11.86□□□□□ -0.51
AC016954.1-201ENST00000549976 CARD14Q9BXL6 1004 aa11.86□□□□□ -0.51
AC016954.1-201ENST00000549976 ATG3Q9NT62 314 aa11.86□□□□□ -0.51
AC016954.1-201ENST00000549976 WDR90Q96KV7 1748 aa11.86□□□□□ -0.51
AC016954.1-201ENST00000549976 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
AC016954.1-201ENST00000549976 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
AC016954.1-201ENST00000549976 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
AC016954.1-201ENST00000549976 DPEP1P16444 411 aa11.85□□□□□ -0.51
AC016954.1-201ENST00000549976 TGFB2P61812 414 aa11.85□□□□□ -0.51
AC016954.1-201ENST00000549976 TMF1P82094 1093 aa11.85□□□□□ -0.51
AC016954.1-201ENST00000549976 SLC4A9Q96Q91 983 aa11.85□□□□□ -0.51
AC016954.1-201ENST00000549976 EYA1Q99502 592 aa11.85□□□□□ -0.51
AC016954.1-201ENST00000549976 KDRP35968 1356 aa11.84□□□□□ -0.51
AC016954.1-201ENST00000549976 ANKRD26Q9UPS8 1709 aa11.84□□□□□ -0.51
AC016954.1-201ENST00000549976 PHKG2P15735 406 aa11.84□□□□□ -0.51
AC016954.1-201ENST00000549976 HTRA3P83110 453 aa11.84□□□□□ -0.51
AC016954.1-201ENST00000549976 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 KCNA3P22001 575 aa11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 TRAPPC3LQ5T215 181 aa11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 IFNL2Q8IZJ0 200 aa11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 NLGN1Q8N2Q7 840 aa11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 RTCBQ9Y3I0 505 aaKnown RBP11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 WASHC2AQ641Q2 1341 aa11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 BRCA1P38398 1863 aaKnown RBP11.83□□□□□ -0.52
AC016954.1-201ENST00000549976 FCHSD2O94868 740 aa11.82□□□□□ -0.52
AC016954.1-201ENST00000549976 GYS1P13807 737 aa11.82□□□□□ -0.52
AC016954.1-201ENST00000549976 CCDC87Q9NVE4 849 aa11.82□□□□□ -0.52
AC016954.1-201ENST00000549976 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
AC016954.1-201ENST00000549976 COL5A3P25940 1745 aaPredicted RBP11.81□□□□□ -0.52
AC016954.1-201ENST00000549976 COL13A1Q5TAT6 717 aaPredicted RBP11.81□□□□□ -0.52
AC016954.1-201ENST00000549976 C9orf131Q5VYM1 1079 aa11.81□□□□□ -0.52
AC016954.1-201ENST00000549976 RBM46Q8TBY0 533 aaKnown RBP11.81□□□□□ -0.52
AC016954.1-201ENST00000549976 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
AC016954.1-201ENST00000549976 KLRG1Q96E93 195 aa11.8□□□□□ -0.52
AC016954.1-201ENST00000549976 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
AC016954.1-201ENST00000549976 CNTNAP4Q9C0A0 1308 aa11.8□□□□□ -0.52
AC016954.1-201ENST00000549976 KCPQ6ZWJ8 1503 aa11.8□□□□□ -0.52
AC016954.1-201ENST00000549976 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
AC016954.1-201ENST00000549976 RPS6KA4O75676 772 aa11.79□□□□□ -0.52
AC016954.1-201ENST00000549976 RFC4P35249 363 aa11.79□□□□□ -0.52
AC016954.1-201ENST00000549976 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
AC016954.1-201ENST00000549976 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
AC016954.1-201ENST00000549976 JMYQ8N9B5 988 aa11.79□□□□□ -0.52
AC016954.1-201ENST00000549976 POLKQ9UBT6 870 aa11.79□□□□□ -0.52
AC016954.1-201ENST00000549976 EIF4A2Q14240 407 aaKnown RBP11.78□□□□□ -0.52
AC016954.1-201ENST00000549976 DCAF5Q96JK2 942 aa11.78□□□□□ -0.52
AC016954.1-201ENST00000549976 PLEKHG2Q9H7P9 1386 aa11.78□□□□□ -0.52
AC016954.1-201ENST00000549976 ERVV-2B6SEH9 535 aa11.77□□□□□ -0.53
AC016954.1-201ENST00000549976 DDR1Q08345 913 aa11.77□□□□□ -0.53
AC016954.1-201ENST00000549976 FSTL1Q12841 308 aa11.77□□□□□ -0.53
AC016954.1-201ENST00000549976 CDCA8Q53HL2 280 aa11.77□□□□□ -0.53
AC016954.1-201ENST00000549976 RRAGCQ9HB90 399 aa11.77□□□□□ -0.53
AC016954.1-201ENST00000549976 RNF181Q9P0P0 153 aa11.77□□□□□ -0.53
AC016954.1-201ENST00000549976 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
AC016954.1-201ENST00000549976 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.53
AC016954.1-201ENST00000549976 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.53
AC016954.1-201ENST00000549976 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
AC016954.1-201ENST00000549976 CAPN15O75808 1086 aa11.76□□□□□ -0.53
AC016954.1-201ENST00000549976 CHRNA5P30532 468 aa11.76□□□□□ -0.53
AC016954.1-201ENST00000549976 FKBP8Q14318 412 aa11.76□□□□□ -0.53
AC016954.1-201ENST00000549976 KDM2BQ8NHM5 1336 aa11.76□□□□□ -0.53
AC016954.1-201ENST00000549976 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
AC016954.1-201ENST00000549976 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
AC016954.1-201ENST00000549976 TNRC6CQ9HCJ0 1690 aaKnown RBP11.75□□□□□ -0.53
AC016954.1-201ENST00000549976 TJP1Q07157 1748 aa11.74□□□□□ -0.53
AC016954.1-201ENST00000549976 PTCD1O75127 700 aaKnown RBP11.74□□□□□ -0.53
AC016954.1-201ENST00000549976 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
AC016954.1-201ENST00000549976 CRKLP46109 303 aaKnown RBP11.74□□□□□ -0.53
AC016954.1-201ENST00000549976 CABP4P57796 275 aa11.74□□□□□ -0.53
AC016954.1-201ENST00000549976 USP42Q9H9J4 1324 aaKnown RBP11.74□□□□□ -0.53
AC016954.1-201ENST00000549976 ADAMTS7Q9UKP4 1686 aa11.74□□□□□ -0.53
AC016954.1-201ENST00000549976 SBF1O95248 1867 aa11.73□□□□□ -0.53
AC016954.1-201ENST00000549976 HSP90AB1P08238 724 aaKnown RBP11.73□□□□□ -0.53
AC016954.1-201ENST00000549976 RASSF7Q02833 373 aa11.73□□□□□ -0.53
AC016954.1-201ENST00000549976 ZNF530Q6P9A1 599 aaPredicted RBP11.73□□□□□ -0.53
AC016954.1-201ENST00000549976 TNS4Q8IZW8 715 aa11.73□□□□□ -0.53
AC016954.1-201ENST00000549976 POLRMTO00411 1230 aaKnown RBP11.72□□□□□ -0.53
AC016954.1-201ENST00000549976 TM4SF1P30408 202 aa11.72□□□□□ -0.53
AC016954.1-201ENST00000549976 PRELPP51888 382 aa11.72□□□□□ -0.53
AC016954.1-201ENST00000549976 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
AC016954.1-201ENST00000549976 INTS5Q6P9B9 1019 aaKnown RBP11.71□□□□□ -0.53
AC016954.1-201ENST00000549976 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
AC016954.1-201ENST00000549976 SMC1BQ8NDV3 1235 aa11.71□□□□□ -0.53
AC016954.1-201ENST00000549976 MTHFSP49914 203 aa11.7□□□□□ -0.54
AC016954.1-201ENST00000549976 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
AC016954.1-201ENST00000549976 AEBP1Q8IUX7 1158 aa11.7□□□□□ -0.54
AC016954.1-201ENST00000549976 AMOTQ4VCS5 1084 aa11.69□□□□□ -0.54
AC016954.1-201ENST00000549976 GLTPD2A6NH11 291 aa11.68□□□□□ -0.54
AC016954.1-201ENST00000549976 HSPA1AP0DMV8 641 aaKnown RBP11.68□□□□□ -0.54
AC016954.1-201ENST00000549976 HSPA1BP0DMV9 641 aaKnown RBP11.68□□□□□ -0.54
AC016954.1-201ENST00000549976 DNAJC10Q8IXB1 793 aa11.68□□□□□ -0.54
AC016954.1-201ENST00000549976 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms