RNA–Protein interactions for RNA: ENST00000549976.1

AC016954.1-201, humanhuman

BASIC

Gene AC016954.1, Length 745 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016954.1-201ENST00000549976 NISCHQ9Y2I1 1504 aa21.74■■□□□ 1.07
AC016954.1-201ENST00000549976 ABCC9O60706 1549 aa19.92■□□□□ 0.78
AC016954.1-201ENST00000549976 CCDC180Q9P1Z9 1646 aa19.61■□□□□ 0.73
AC016954.1-201ENST00000549976 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
AC016954.1-201ENST00000549976 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
AC016954.1-201ENST00000549976 NACADO15069 1562 aa18.59■□□□□ 0.57
AC016954.1-201ENST00000549976 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.55
AC016954.1-201ENST00000549976 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
AC016954.1-201ENST00000549976 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
AC016954.1-201ENST00000549976 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
AC016954.1-201ENST00000549976 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
AC016954.1-201ENST00000549976 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
AC016954.1-201ENST00000549976 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
AC016954.1-201ENST00000549976 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
AC016954.1-201ENST00000549976 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
AC016954.1-201ENST00000549976 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
AC016954.1-201ENST00000549976 SCRIBQ14160 1630 aa17.88■□□□□ 0.45
AC016954.1-201ENST00000549976 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
AC016954.1-201ENST00000549976 DNAJC5Q9H3Z4 198 aa17.58■□□□□ 0.4
AC016954.1-201ENST00000549976 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
AC016954.1-201ENST00000549976 CUX2O14529 1486 aa17.24■□□□□ 0.35
AC016954.1-201ENST00000549976 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
AC016954.1-201ENST00000549976 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
AC016954.1-201ENST00000549976 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
AC016954.1-201ENST00000549976 NESP48681 1621 aa17.05■□□□□ 0.32
AC016954.1-201ENST00000549976 HMGXB3Q12766 1538 aa17.02■□□□□ 0.32
AC016954.1-201ENST00000549976 SMARCA4P51532 1647 aa17.02■□□□□ 0.31
AC016954.1-201ENST00000549976 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
AC016954.1-201ENST00000549976 THOC2Q8NI27 1593 aaKnown RBP16.92■□□□□ 0.3
AC016954.1-201ENST00000549976 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
AC016954.1-201ENST00000549976 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
AC016954.1-201ENST00000549976 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
AC016954.1-201ENST00000549976 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
AC016954.1-201ENST00000549976 KIF21AQ7Z4S6 1674 aa16.8■□□□□ 0.28
AC016954.1-201ENST00000549976 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.28
AC016954.1-201ENST00000549976 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
AC016954.1-201ENST00000549976 TRIM41Q8WV44 630 aa16.69■□□□□ 0.26
AC016954.1-201ENST00000549976 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.26
AC016954.1-201ENST00000549976 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
AC016954.1-201ENST00000549976 WDR62O43379 1518 aa16.6■□□□□ 0.25
AC016954.1-201ENST00000549976 WIZO95785 1651 aa16.56■□□□□ 0.24
AC016954.1-201ENST00000549976 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
AC016954.1-201ENST00000549976 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
AC016954.1-201ENST00000549976 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
AC016954.1-201ENST00000549976 CFTRP13569 1480 aa16.4■□□□□ 0.22
AC016954.1-201ENST00000549976 URB2Q14146 1524 aaKnown RBP16.37■□□□□ 0.21
AC016954.1-201ENST00000549976 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
AC016954.1-201ENST00000549976 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
AC016954.1-201ENST00000549976 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.19
AC016954.1-201ENST00000549976 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.19
AC016954.1-201ENST00000549976 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.19
AC016954.1-201ENST00000549976 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
AC016954.1-201ENST00000549976 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
AC016954.1-201ENST00000549976 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
AC016954.1-201ENST00000549976 IFT140Q96RY7 1462 aa16.17■□□□□ 0.18
AC016954.1-201ENST00000549976 ARHGEF11O15085 1522 aa16.17■□□□□ 0.18
AC016954.1-201ENST00000549976 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
AC016954.1-201ENST00000549976 TOPBP1Q92547 1522 aa16.14■□□□□ 0.17
AC016954.1-201ENST00000549976 EIF4G3O43432 1585 aaKnown RBP16.1■□□□□ 0.17
AC016954.1-201ENST00000549976 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
AC016954.1-201ENST00000549976 CHD1O14646 1710 aa16.04■□□□□ 0.16
AC016954.1-201ENST00000549976 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
AC016954.1-201ENST00000549976 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
AC016954.1-201ENST00000549976 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
AC016954.1-201ENST00000549976 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
AC016954.1-201ENST00000549976 ARAP1Q96P48 1450 aa16■□□□□ 0.15
AC016954.1-201ENST00000549976 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
AC016954.1-201ENST00000549976 FBLN2P98095 1184 aa15.95■□□□□ 0.14
AC016954.1-201ENST00000549976 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
AC016954.1-201ENST00000549976 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
AC016954.1-201ENST00000549976 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
AC016954.1-201ENST00000549976 SOGA1O94964 1423 aa15.86■□□□□ 0.13
AC016954.1-201ENST00000549976 SNAPC4Q5SXM2 1469 aa15.85■□□□□ 0.13
AC016954.1-201ENST00000549976 CLASP1Q7Z460 1538 aa15.85■□□□□ 0.13
AC016954.1-201ENST00000549976 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
AC016954.1-201ENST00000549976 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
AC016954.1-201ENST00000549976 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
AC016954.1-201ENST00000549976 CHMP7Q8WUX9 453 aaPredicted RBP15.78■□□□□ 0.12
AC016954.1-201ENST00000549976 CUX1P39880 1505 aa15.77■□□□□ 0.11
AC016954.1-201ENST00000549976 MAGI1Q96QZ7 1491 aaPredicted RBP15.77■□□□□ 0.11
AC016954.1-201ENST00000549976 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
AC016954.1-201ENST00000549976 SYNJ2O15056 1496 aa15.73■□□□□ 0.11
AC016954.1-201ENST00000549976 PBRM1Q86U86 1689 aa15.69■□□□□ 0.1
AC016954.1-201ENST00000549976 GAPVD1Q14C86 1478 aa15.68■□□□□ 0.1
AC016954.1-201ENST00000549976 ABCA5Q8WWZ7 1642 aa15.62■□□□□ 0.09
AC016954.1-201ENST00000549976 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
AC016954.1-201ENST00000549976 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
AC016954.1-201ENST00000549976 GRIN2AQ12879 1464 aa15.55■□□□□ 0.08
AC016954.1-201ENST00000549976 CEP170Q5SW79 1584 aa15.53■□□□□ 0.08
AC016954.1-201ENST00000549976 ADAMTS12P58397 1594 aa15.52■□□□□ 0.07
AC016954.1-201ENST00000549976 NUP160Q12769 1436 aa15.51■□□□□ 0.07
AC016954.1-201ENST00000549976 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
AC016954.1-201ENST00000549976 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
AC016954.1-201ENST00000549976 FHAD1B1AJZ9 1412 aa15.44■□□□□ 0.06
AC016954.1-201ENST00000549976 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
AC016954.1-201ENST00000549976 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
AC016954.1-201ENST00000549976 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
AC016954.1-201ENST00000549976 PRG4Q92954 1404 aaPredicted RBP15.39■□□□□ 0.05
AC016954.1-201ENST00000549976 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
AC016954.1-201ENST00000549976 SUPT5HO00267 1087 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms