RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 USP35Q9P2H5 1018 aa17.52■□□□□ 0.4
CALCOCO1-214ENST00000549613 RXRBP28702 533 aa17.51■□□□□ 0.39
CALCOCO1-214ENST00000549613 NKX1-1Q15270 411 aaPredicted RBP17.51■□□□□ 0.39
CALCOCO1-214ENST00000549613 C20orf194Q5TEA3 1177 aa17.51■□□□□ 0.39
CALCOCO1-214ENST00000549613 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
CALCOCO1-214ENST00000549613 SLC52A2Q9HAB3 445 aa17.51■□□□□ 0.39
CALCOCO1-214ENST00000549613 PLCH1Q4KWH8 1693 aa17.51■□□□□ 0.39
CALCOCO1-214ENST00000549613 ADAMTS7Q9UKP4 1686 aa17.51■□□□□ 0.39
CALCOCO1-214ENST00000549613 NWD2Q9ULI1 1742 aa17.5■□□□□ 0.39
CALCOCO1-214ENST00000549613 HOXB7P09629 217 aa17.5■□□□□ 0.39
CALCOCO1-214ENST00000549613 ATF7IPQ6VMQ6 1270 aa17.5■□□□□ 0.39
CALCOCO1-214ENST00000549613 NOB1Q9ULX3 412 aaKnown RBP17.5■□□□□ 0.39
CALCOCO1-214ENST00000549613 SLIT2O94813 1529 aa17.5■□□□□ 0.39
CALCOCO1-214ENST00000549613 SCN11AQ9UI33 1791 aa17.49■□□□□ 0.39
CALCOCO1-214ENST00000549613 ERVV-2B6SEH9 535 aa17.49■□□□□ 0.39
CALCOCO1-214ENST00000549613 CABP4P57796 275 aa17.49■□□□□ 0.39
CALCOCO1-214ENST00000549613 EIF4A1P60842 406 aaKnown RBP17.49■□□□□ 0.39
CALCOCO1-214ENST00000549613 AAMPQ13685 434 aa17.49■□□□□ 0.39
CALCOCO1-214ENST00000549613 MEX3CQ5U5Q3 659 aaKnown RBP17.49■□□□□ 0.39
CALCOCO1-214ENST00000549613 UNC5CLQ8IV45 518 aa17.49■□□□□ 0.39
CALCOCO1-214ENST00000549613 DZIP1LQ8IYY4 767 aaKnown RBP17.49■□□□□ 0.39
CALCOCO1-214ENST00000549613 SPATA31A1Q5TZJ5 1347 aa17.48■□□□□ 0.39
CALCOCO1-214ENST00000549613 EXOC5O00471 708 aa17.48■□□□□ 0.39
CALCOCO1-214ENST00000549613 KRT24Q2M2I5 525 aa17.48■□□□□ 0.39
CALCOCO1-214ENST00000549613 CCDC30Q5VVM6 783 aa17.48■□□□□ 0.39
CALCOCO1-214ENST00000549613 FTSJ3Q8IY81 847 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-214ENST00000549613 DDX54Q8TDD1 881 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-214ENST00000549613 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
CALCOCO1-214ENST00000549613 API5Q9BZZ5 524 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-214ENST00000549613 VIRMAQ69YN4 1812 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-214ENST00000549613 KDM6AO15550 1401 aaPredicted RBP17.47■□□□□ 0.39
CALCOCO1-214ENST00000549613 STK31Q9BXU1 1019 aa17.47■□□□□ 0.39
CALCOCO1-214ENST00000549613 NRAPQ86VF7 1730 aa17.47■□□□□ 0.39
CALCOCO1-214ENST00000549613 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
CALCOCO1-214ENST00000549613 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
CALCOCO1-214ENST00000549613 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
CALCOCO1-214ENST00000549613 PELP1Q8IZL8 1130 aaKnown RBP17.46■□□□□ 0.39
CALCOCO1-214ENST00000549613 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.39
CALCOCO1-214ENST00000549613 NFATC2IPQ8NCF5 419 aa17.46■□□□□ 0.39
CALCOCO1-214ENST00000549613 PANK1Q8TE04 598 aa17.46■□□□□ 0.39
CALCOCO1-214ENST00000549613 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
CALCOCO1-214ENST00000549613 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.39
CALCOCO1-214ENST00000549613 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
CALCOCO1-214ENST00000549613 TRIM27P14373 513 aa17.45■□□□□ 0.38
CALCOCO1-214ENST00000549613 BARGINQ6ZT62 677 aa17.45■□□□□ 0.38
CALCOCO1-214ENST00000549613 SIPA1L3O60292 1781 aaPredicted RBP17.44■□□□□ 0.38
CALCOCO1-214ENST00000549613 TCERG1O14776 1098 aaKnown RBP17.44■□□□□ 0.38
CALCOCO1-214ENST00000549613 VPS72Q15906 364 aa17.44■□□□□ 0.38
CALCOCO1-214ENST00000549613 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
CALCOCO1-214ENST00000549613 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
CALCOCO1-214ENST00000549613 CHMP4BQ9H444 224 aaKnown RBP17.44■□□□□ 0.38
CALCOCO1-214ENST00000549613 MRC1P22897 1456 aa17.44■□□□□ 0.38
CALCOCO1-214ENST00000549613 KCNQ3O43525 872 aa17.43■□□□□ 0.38
CALCOCO1-214ENST00000549613 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
CALCOCO1-214ENST00000549613 ZNF790Q6PG37 636 aa17.43■□□□□ 0.38
CALCOCO1-214ENST00000549613 CLUAP1Q96AJ1 413 aa17.43■□□□□ 0.38
CALCOCO1-214ENST00000549613 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
CALCOCO1-214ENST00000549613 PTPRCP08575 1304 aa17.43■□□□□ 0.38
CALCOCO1-214ENST00000549613 MVPQ14764 893 aaKnown RBP17.42■□□□□ 0.38
CALCOCO1-214ENST00000549613 HDGFL1Q5TGJ6 251 aa17.42■□□□□ 0.38
CALCOCO1-214ENST00000549613 DDX19BQ9UMR2 479 aa17.42■□□□□ 0.38
CALCOCO1-214ENST00000549613 HEG1Q9ULI3 1381 aa17.41■□□□□ 0.38
CALCOCO1-214ENST00000549613 LRP6O75581 1613 aa17.41■□□□□ 0.38
CALCOCO1-214ENST00000549613 GIGYF1O75420 1035 aaPredicted RBP17.41■□□□□ 0.38
CALCOCO1-214ENST00000549613 RLBP1P12271 317 aa17.41■□□□□ 0.38
CALCOCO1-214ENST00000549613 DDB1Q16531 1140 aa17.41■□□□□ 0.38
CALCOCO1-214ENST00000549613 USP21Q9UK80 565 aa17.41■□□□□ 0.38
CALCOCO1-214ENST00000549613 BCL9LQ86UU0 1499 aa17.4■□□□□ 0.38
CALCOCO1-214ENST00000549613 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
CALCOCO1-214ENST00000549613 CACNA1FO60840 1977 aa17.4■□□□□ 0.38
CALCOCO1-214ENST00000549613 SHANK3Q9BYB0 1731 aa17.39■□□□□ 0.37
CALCOCO1-214ENST00000549613 FMNL2Q96PY5 1086 aa17.39■□□□□ 0.37
CALCOCO1-214ENST00000549613 TNS2Q63HR2 1409 aa17.38■□□□□ 0.37
CALCOCO1-214ENST00000549613 WNK3Q9BYP7 1800 aa17.38■□□□□ 0.37
CALCOCO1-214ENST00000549613 EIF2S2P20042 333 aaKnown RBP17.38■□□□□ 0.37
CALCOCO1-214ENST00000549613 SLC39A6Q13433 755 aa17.38■□□□□ 0.37
CALCOCO1-214ENST00000549613 ITPRIPQ8IWB1 547 aa17.38■□□□□ 0.37
CALCOCO1-214ENST00000549613 TMEM57Q8N5G2 664 aa17.38■□□□□ 0.37
CALCOCO1-214ENST00000549613 TMOD3Q9NYL9 352 aa17.38■□□□□ 0.37
CALCOCO1-214ENST00000549613 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
CALCOCO1-214ENST00000549613 DBF4Q9UBU7 674 aaPredicted RBP17.37■□□□□ 0.37
CALCOCO1-214ENST00000549613 ABCC4O15439 1325 aa17.37■□□□□ 0.37
CALCOCO1-214ENST00000549613 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
CALCOCO1-214ENST00000549613 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.35■□□□□ 0.37
CALCOCO1-214ENST00000549613 FLIIQ13045 1269 aa17.35■□□□□ 0.37
CALCOCO1-214ENST00000549613 ZNF496Q96IT1 587 aaPredicted RBP17.35■□□□□ 0.37
CALCOCO1-214ENST00000549613 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
CALCOCO1-214ENST00000549613 G2E3Q7L622 706 aa17.34■□□□□ 0.37
CALCOCO1-214ENST00000549613 AFF2P51816 1311 aa17.33■□□□□ 0.36
CALCOCO1-214ENST00000549613 HYPKQ9NX55 129 aa17.33■□□□□ 0.36
CALCOCO1-214ENST00000549613 TRPC5Q9UL62 973 aaPredicted RBP17.33■□□□□ 0.36
CALCOCO1-214ENST00000549613 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
CALCOCO1-214ENST00000549613 FKBP5Q13451 457 aaPredicted RBP17.32■□□□□ 0.36
CALCOCO1-214ENST00000549613 FAM98CQ17RN3 349 aaKnown RBP17.32■□□□□ 0.36
CALCOCO1-214ENST00000549613 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
CALCOCO1-214ENST00000549613 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
CALCOCO1-214ENST00000549613 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
CALCOCO1-214ENST00000549613 PIGBQ92521 554 aa17.31■□□□□ 0.36
CALCOCO1-214ENST00000549613 GJD4Q96KN9 370 aaPredicted RBP17.31■□□□□ 0.36
CALCOCO1-214ENST00000549613 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 239.1 ms