RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 KCNA3P22001 575 aa12.61□□□□□ -0.39
UBE2N-203ENST00000549490 ATP6V1AP38606 617 aa12.61□□□□□ -0.39
UBE2N-203ENST00000549490 TMF1P82094 1093 aa12.61□□□□□ -0.39
UBE2N-203ENST00000549490 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
UBE2N-203ENST00000549490 KDM2BQ8NHM5 1336 aa12.61□□□□□ -0.39
UBE2N-203ENST00000549490 INSRP06213 1382 aa12.6□□□□□ -0.39
UBE2N-203ENST00000549490 HSPA1AP0DMV8 641 aaKnown RBP12.6□□□□□ -0.39
UBE2N-203ENST00000549490 HSPA1BP0DMV9 641 aaKnown RBP12.6□□□□□ -0.39
UBE2N-203ENST00000549490 TRAPPC3LQ5T215 181 aa12.6□□□□□ -0.39
UBE2N-203ENST00000549490 CCDC87Q9NVE4 849 aa12.6□□□□□ -0.39
UBE2N-203ENST00000549490 KCPQ6ZWJ8 1503 aa12.6□□□□□ -0.39
UBE2N-203ENST00000549490 FYB1O15117 783 aa12.59□□□□□ -0.39
UBE2N-203ENST00000549490 SMC1BQ8NDV3 1235 aa12.59□□□□□ -0.39
UBE2N-203ENST00000549490 GGNBP2Q9H3C7 697 aa12.59□□□□□ -0.39
UBE2N-203ENST00000549490 TMOD3Q9NYL9 352 aa12.59□□□□□ -0.39
UBE2N-203ENST00000549490 RNF181Q9P0P0 153 aa12.59□□□□□ -0.39
UBE2N-203ENST00000549490 RTCBQ9Y3I0 505 aaKnown RBP12.59□□□□□ -0.39
UBE2N-203ENST00000549490 KIAA1551Q9HCM1 1747 aa12.59□□□□□ -0.39
UBE2N-203ENST00000549490 GYS1P13807 737 aa12.58□□□□□ -0.4
UBE2N-203ENST00000549490 ARHGEF1Q92888 912 aaKnown RBP12.58□□□□□ -0.4
UBE2N-203ENST00000549490 DCAF5Q96JK2 942 aa12.58□□□□□ -0.4
UBE2N-203ENST00000549490 ATG3Q9NT62 314 aa12.58□□□□□ -0.4
UBE2N-203ENST00000549490 PIM2Q9P1W9 311 aa12.57□□□□□ -0.4
UBE2N-203ENST00000549490 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
UBE2N-203ENST00000549490 PARP3Q9Y6F1 533 aa12.57□□□□□ -0.4
UBE2N-203ENST00000549490 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
UBE2N-203ENST00000549490 N4BP2Q86UW6 1770 aaPredicted RBP12.56□□□□□ -0.4
UBE2N-203ENST00000549490 KIF13BQ9NQT8 1826 aa12.56□□□□□ -0.4
UBE2N-203ENST00000549490 DALRD3Q5D0E6 543 aaKnown RBP12.56□□□□□ -0.4
UBE2N-203ENST00000549490 SLC4A9Q96Q91 983 aa12.56□□□□□ -0.4
UBE2N-203ENST00000549490 TESK2Q96S53 571 aa12.56□□□□□ -0.4
UBE2N-203ENST00000549490 FLT4P35916 1363 aa12.56□□□□□ -0.4
UBE2N-203ENST00000549490 ADRA2BP18089 450 aa12.55□□□□□ -0.4
UBE2N-203ENST00000549490 RC3H1Q5TC82 1133 aaKnown RBP12.55□□□□□ -0.4
UBE2N-203ENST00000549490 RPS6KA4O75676 772 aa12.54□□□□□ -0.4
UBE2N-203ENST00000549490 RFC4P35249 363 aa12.54□□□□□ -0.4
UBE2N-203ENST00000549490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBE2N-203ENST00000549490 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
UBE2N-203ENST00000549490 ITGB4P16144 1822 aa12.53□□□□□ -0.4
UBE2N-203ENST00000549490 PHKG2P15735 406 aa12.53□□□□□ -0.4
UBE2N-203ENST00000549490 CHRNA5P30532 468 aa12.53□□□□□ -0.4
UBE2N-203ENST00000549490 KDRP35968 1356 aa12.53□□□□□ -0.4
UBE2N-203ENST00000549490 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
UBE2N-203ENST00000549490 ST20-MTHFSA0A0A6YYL1 179 aa12.52□□□□□ -0.41
UBE2N-203ENST00000549490 SLC34A2O95436 690 aa12.52□□□□□ -0.41
UBE2N-203ENST00000549490 VEGFAP15692 232 aaPredicted RBP12.52□□□□□ -0.41
UBE2N-203ENST00000549490 IFNL2Q8IZJ0 200 aa12.52□□□□□ -0.41
UBE2N-203ENST00000549490 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
UBE2N-203ENST00000549490 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
UBE2N-203ENST00000549490 CNTNAP4Q9C0A0 1308 aa12.52□□□□□ -0.41
UBE2N-203ENST00000549490 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
UBE2N-203ENST00000549490 RASSF7Q02833 373 aa12.51□□□□□ -0.41
UBE2N-203ENST00000549490 DDR1Q08345 913 aa12.51□□□□□ -0.41
UBE2N-203ENST00000549490 TONSLQ96HA7 1378 aa12.51□□□□□ -0.41
UBE2N-203ENST00000549490 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
UBE2N-203ENST00000549490 GLTPD2A6NH11 291 aa12.5□□□□□ -0.41
UBE2N-203ENST00000549490 FKBP8Q14318 412 aa12.5□□□□□ -0.41
UBE2N-203ENST00000549490 EYA1Q99502 592 aa12.5□□□□□ -0.41
UBE2N-203ENST00000549490 SRP68Q9UHB9 627 aaKnown RBP12.5□□□□□ -0.41
UBE2N-203ENST00000549490 ZC3H4Q9UPT8 1303 aaKnown RBP12.5□□□□□ -0.41
UBE2N-203ENST00000549490 PPM1GO15355 546 aaPredicted RBP12.49□□□□□ -0.41
UBE2N-203ENST00000549490 SLC24A1O60721 1099 aa12.49□□□□□ -0.41
UBE2N-203ENST00000549490 BRCA1P38398 1863 aaKnown RBP12.48□□□□□ -0.41
UBE2N-203ENST00000549490 KDM6AO15550 1401 aaPredicted RBP12.48□□□□□ -0.41
UBE2N-203ENST00000549490 LMNB1P20700 586 aa12.48□□□□□ -0.41
UBE2N-203ENST00000549490 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
UBE2N-203ENST00000549490 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
UBE2N-203ENST00000549490 ARFGEF1Q9Y6D6 1849 aa12.47□□□□□ -0.41
UBE2N-203ENST00000549490 POTECB2RU33 542 aa12.47□□□□□ -0.41
UBE2N-203ENST00000549490 ERVV-2B6SEH9 535 aa12.47□□□□□ -0.41
UBE2N-203ENST00000549490 TNRC6CQ9HCJ0 1690 aaKnown RBP12.47□□□□□ -0.41
UBE2N-203ENST00000549490 POLRMTO00411 1230 aaKnown RBP12.46□□□□□ -0.41
UBE2N-203ENST00000549490 FOXN1O15353 648 aa12.46□□□□□ -0.41
UBE2N-203ENST00000549490 TM4SF1P30408 202 aa12.46□□□□□ -0.41
UBE2N-203ENST00000549490 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
UBE2N-203ENST00000549490 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.41
UBE2N-203ENST00000549490 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
UBE2N-203ENST00000549490 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
UBE2N-203ENST00000549490 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
UBE2N-203ENST00000549490 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
UBE2N-203ENST00000549490 NFKBIEO00221 500 aa12.43□□□□□ -0.42
UBE2N-203ENST00000549490 HSP90AB1P08238 724 aaKnown RBP12.43□□□□□ -0.42
UBE2N-203ENST00000549490 CABP4P57796 275 aa12.43□□□□□ -0.42
UBE2N-203ENST00000549490 INTS5Q6P9B9 1019 aaKnown RBP12.42□□□□□ -0.42
UBE2N-203ENST00000549490 TTLL6Q8N841 843 aa12.42□□□□□ -0.42
UBE2N-203ENST00000549490 POLKQ9UBT6 870 aa12.42□□□□□ -0.42
UBE2N-203ENST00000549490 ZNF831Q5JPB2 1677 aa12.42□□□□□ -0.42
UBE2N-203ENST00000549490 SBF1O95248 1867 aa12.41□□□□□ -0.42
UBE2N-203ENST00000549490 EIF4A2Q14240 407 aaKnown RBP12.41□□□□□ -0.42
UBE2N-203ENST00000549490 USPL1Q5W0Q7 1092 aa12.41□□□□□ -0.42
UBE2N-203ENST00000549490 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
UBE2N-203ENST00000549490 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
UBE2N-203ENST00000549490 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.42
UBE2N-203ENST00000549490 ZPR1O75312 459 aa12.4□□□□□ -0.42
UBE2N-203ENST00000549490 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
UBE2N-203ENST00000549490 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
UBE2N-203ENST00000549490 CTCFP49711 727 aaPredicted RBP12.4□□□□□ -0.42
UBE2N-203ENST00000549490 NFIXQ14938 502 aa12.4□□□□□ -0.42
UBE2N-203ENST00000549490 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
UBE2N-203ENST00000549490 MYH14Q7Z406 1995 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms