RNA–Protein interactions for RNA: ENST00000549055.1

AC023511.1-201, humanhuman

TSL 3 BASIC

Gene AC023511.1, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023511.1-201ENST00000549055 SSFA2P28290 1259 aa13.06□□□□□ -0.32
AC023511.1-201ENST00000549055 C9orf131Q5VYM1 1079 aa13.06□□□□□ -0.32
AC023511.1-201ENST00000549055 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
AC023511.1-201ENST00000549055 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
AC023511.1-201ENST00000549055 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
AC023511.1-201ENST00000549055 FYB1O15117 783 aa13.05□□□□□ -0.32
AC023511.1-201ENST00000549055 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
AC023511.1-201ENST00000549055 FLT4P35916 1363 aa13.05□□□□□ -0.32
AC023511.1-201ENST00000549055 TONSLQ96HA7 1378 aa13.05□□□□□ -0.32
AC023511.1-201ENST00000549055 C10orf71Q711Q0 1435 aa13.05□□□□□ -0.32
AC023511.1-201ENST00000549055 CCDC88AQ3V6T2 1871 aa13.04□□□□□ -0.32
AC023511.1-201ENST00000549055 TNS4Q8IZW8 715 aa13.04□□□□□ -0.32
AC023511.1-201ENST00000549055 INSRP06213 1382 aa13.04□□□□□ -0.32
AC023511.1-201ENST00000549055 SBF1O95248 1867 aa13.04□□□□□ -0.32
AC023511.1-201ENST00000549055 TNRC6CQ9HCJ0 1690 aaKnown RBP13.03□□□□□ -0.32
AC023511.1-201ENST00000549055 KLRG1Q96E93 195 aa13.03□□□□□ -0.32
AC023511.1-201ENST00000549055 TESK2Q96S53 571 aa13.03□□□□□ -0.32
AC023511.1-201ENST00000549055 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
AC023511.1-201ENST00000549055 MYH14Q7Z406 1995 aaKnown RBP13.03□□□□□ -0.32
AC023511.1-201ENST00000549055 RNF181Q9P0P0 153 aa13.02□□□□□ -0.33
AC023511.1-201ENST00000549055 TIAM2Q8IVF5 1701 aa13.02□□□□□ -0.33
AC023511.1-201ENST00000549055 CHRNA5P30532 468 aa13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 TRAPPC3LQ5T215 181 aa13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 SRP68Q9UHB9 627 aaKnown RBP13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 RTCBQ9Y3I0 505 aaKnown RBP13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 PARP3Q9Y6F1 533 aa13.01□□□□□ -0.33
AC023511.1-201ENST00000549055 ANKRD26Q9UPS8 1709 aa13□□□□□ -0.33
AC023511.1-201ENST00000549055 TMF1P82094 1093 aa13□□□□□ -0.33
AC023511.1-201ENST00000549055 RASSF7Q02833 373 aa13□□□□□ -0.33
AC023511.1-201ENST00000549055 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
AC023511.1-201ENST00000549055 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
AC023511.1-201ENST00000549055 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
AC023511.1-201ENST00000549055 RFC4P35249 363 aa12.99□□□□□ -0.33
AC023511.1-201ENST00000549055 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
AC023511.1-201ENST00000549055 CACNA1SQ13698 1873 aa12.98□□□□□ -0.33
AC023511.1-201ENST00000549055 PCNTO95613 3336 aa12.98□□□□□ -0.33
AC023511.1-201ENST00000549055 GYS1P13807 737 aa12.98□□□□□ -0.33
AC023511.1-201ENST00000549055 PHKG2P15735 406 aa12.98□□□□□ -0.33
AC023511.1-201ENST00000549055 TGFB2P61812 414 aa12.98□□□□□ -0.33
AC023511.1-201ENST00000549055 EYA1Q99502 592 aa12.98□□□□□ -0.33
AC023511.1-201ENST00000549055 TJP1Q07157 1748 aa12.98□□□□□ -0.33
AC023511.1-201ENST00000549055 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
AC023511.1-201ENST00000549055 KDRP35968 1356 aa12.97□□□□□ -0.33
AC023511.1-201ENST00000549055 PTCD1O75127 700 aaKnown RBP12.97□□□□□ -0.33
AC023511.1-201ENST00000549055 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
AC023511.1-201ENST00000549055 HSPA1AP0DMV8 641 aaKnown RBP12.96□□□□□ -0.33
AC023511.1-201ENST00000549055 HSPA1BP0DMV9 641 aaKnown RBP12.96□□□□□ -0.33
AC023511.1-201ENST00000549055 KCNA3P22001 575 aa12.96□□□□□ -0.33
AC023511.1-201ENST00000549055 IFNL2Q8IZJ0 200 aa12.96□□□□□ -0.33
AC023511.1-201ENST00000549055 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.33
AC023511.1-201ENST00000549055 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
AC023511.1-201ENST00000549055 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
AC023511.1-201ENST00000549055 KDM2BQ8NHM5 1336 aa12.95□□□□□ -0.34
AC023511.1-201ENST00000549055 DDR1Q08345 913 aa12.95□□□□□ -0.34
AC023511.1-201ENST00000549055 FKBP8Q14318 412 aa12.95□□□□□ -0.34
AC023511.1-201ENST00000549055 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
AC023511.1-201ENST00000549055 DALRD3Q5D0E6 543 aaKnown RBP12.95□□□□□ -0.34
AC023511.1-201ENST00000549055 PIM2Q9P1W9 311 aa12.95□□□□□ -0.34
AC023511.1-201ENST00000549055 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
AC023511.1-201ENST00000549055 JMYQ8N9B5 988 aa12.94□□□□□ -0.34
AC023511.1-201ENST00000549055 CARD14Q9BXL6 1004 aa12.94□□□□□ -0.34
AC023511.1-201ENST00000549055 PRELPP51888 382 aa12.93□□□□□ -0.34
AC023511.1-201ENST00000549055 PUS7Q96PZ0 661 aaKnown RBP12.93□□□□□ -0.34
AC023511.1-201ENST00000549055 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
AC023511.1-201ENST00000549055 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
AC023511.1-201ENST00000549055 HMGB2P26583 209 aaKnown RBP12.92□□□□□ -0.34
AC023511.1-201ENST00000549055 FSTL1Q12841 308 aa12.92□□□□□ -0.34
AC023511.1-201ENST00000549055 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
AC023511.1-201ENST00000549055 ZNF530Q6P9A1 599 aaPredicted RBP12.92□□□□□ -0.34
AC023511.1-201ENST00000549055 SMC1BQ8NDV3 1235 aa12.92□□□□□ -0.34
AC023511.1-201ENST00000549055 DCAF5Q96JK2 942 aa12.92□□□□□ -0.34
AC023511.1-201ENST00000549055 DLEC1Q9Y238 1755 aa12.92□□□□□ -0.34
AC023511.1-201ENST00000549055 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
AC023511.1-201ENST00000549055 CRKLP46109 303 aaKnown RBP12.91□□□□□ -0.34
AC023511.1-201ENST00000549055 CABP4P57796 275 aa12.91□□□□□ -0.34
AC023511.1-201ENST00000549055 ZNF831Q5JPB2 1677 aa12.91□□□□□ -0.34
AC023511.1-201ENST00000549055 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
AC023511.1-201ENST00000549055 ADAMTS7Q9UKP4 1686 aa12.9□□□□□ -0.34
AC023511.1-201ENST00000549055 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
AC023511.1-201ENST00000549055 USPL1Q5W0Q7 1092 aa12.89□□□□□ -0.35
AC023511.1-201ENST00000549055 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
AC023511.1-201ENST00000549055 KIF24Q5T7B8 1368 aa12.89□□□□□ -0.35
AC023511.1-201ENST00000549055 SCN11AQ9UI33 1791 aa12.89□□□□□ -0.35
AC023511.1-201ENST00000549055 WASHC2AQ641Q2 1341 aa12.88□□□□□ -0.35
AC023511.1-201ENST00000549055 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
AC023511.1-201ENST00000549055 BICDL1Q6ZP65 573 aa12.88□□□□□ -0.35
AC023511.1-201ENST00000549055 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
AC023511.1-201ENST00000549055 POLKQ9UBT6 870 aa12.88□□□□□ -0.35
AC023511.1-201ENST00000549055 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
AC023511.1-201ENST00000549055 CARMIL3Q8ND23 1372 aa12.87□□□□□ -0.35
AC023511.1-201ENST00000549055 POLRMTO00411 1230 aaKnown RBP12.87□□□□□ -0.35
AC023511.1-201ENST00000549055 ADRA2BP18089 450 aa12.87□□□□□ -0.35
AC023511.1-201ENST00000549055 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
AC023511.1-201ENST00000549055 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
AC023511.1-201ENST00000549055 DNAJC10Q8IXB1 793 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms