RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GTF2E1P29083 439 aaPredicted RBP8.64□□□□□ -1.03
SCAF11-210ENST00000547654 DCAF5Q96JK2 942 aa8.64□□□□□ -1.03
SCAF11-210ENST00000547654 GPAMQ9HCL2 828 aa8.64□□□□□ -1.03
SCAF11-210ENST00000547654 MSTNO14793 375 aa8.63□□□□□ -1.03
SCAF11-210ENST00000547654 GNRH1P01148 92 aa8.63□□□□□ -1.03
SCAF11-210ENST00000547654 PLA2G4EQ3MJ16 856 aa8.63□□□□□ -1.03
SCAF11-210ENST00000547654 MAP2K3P46734 347 aa8.62□□□□□ -1.03
SCAF11-210ENST00000547654 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
SCAF11-210ENST00000547654 CNKSR1Q969H4 720 aa8.62□□□□□ -1.03
SCAF11-210ENST00000547654 LRRC4BQ9NT99 713 aa8.62□□□□□ -1.03
SCAF11-210ENST00000547654 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
SCAF11-210ENST00000547654 PHKA2P46019 1235 aa8.61□□□□□ -1.03
SCAF11-210ENST00000547654 LCE3BQ5TA77 95 aa8.61□□□□□ -1.03
SCAF11-210ENST00000547654 Q8N3U1 123 aa8.61□□□□□ -1.03
SCAF11-210ENST00000547654 GALNT6Q8NCL4 622 aa8.61□□□□□ -1.03
SCAF11-210ENST00000547654 ZSCAN10Q96SZ4 725 aaPredicted RBP8.61□□□□□ -1.03
SCAF11-210ENST00000547654 ESYT1Q9BSJ8 1104 aa8.61□□□□□ -1.03
SCAF11-210ENST00000547654 OXCT2Q9BYC2 517 aaPredicted RBP8.61□□□□□ -1.03
SCAF11-210ENST00000547654 A0A1B0GTH6 734 aa8.6□□□□□ -1.03
SCAF11-210ENST00000547654 OIP5O43482 229 aa8.6□□□□□ -1.03
SCAF11-210ENST00000547654 IL2RAP01589 272 aa8.6□□□□□ -1.03
SCAF11-210ENST00000547654 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
SCAF11-210ENST00000547654 PGBD3Q8N328 593 aa8.6□□□□□ -1.03
SCAF11-210ENST00000547654 CENPCQ03188 943 aa8.59□□□□□ -1.03
SCAF11-210ENST00000547654 TMEM214Q6NUQ4 689 aaKnown RBP8.59□□□□□ -1.03
SCAF11-210ENST00000547654 SPOCK3Q9BQ16 436 aa8.59□□□□□ -1.03
SCAF11-210ENST00000547654 CFHR5Q9BXR6 569 aa8.59□□□□□ -1.03
SCAF11-210ENST00000547654 ESCO1Q5FWF5 840 aa8.58□□□□□ -1.04
SCAF11-210ENST00000547654 IRF5Q13568 498 aa8.56□□□□□ -1.04
SCAF11-210ENST00000547654 LBRQ14739 615 aaKnown RBP8.56□□□□□ -1.04
SCAF11-210ENST00000547654 EFHC2Q5JST6 749 aa8.56□□□□□ -1.04
SCAF11-210ENST00000547654 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
SCAF11-210ENST00000547654 CDCA7Q9BWT1 371 aaPredicted RBP8.56□□□□□ -1.04
SCAF11-210ENST00000547654 RUBCNLQ9H714 662 aa8.56□□□□□ -1.04
SCAF11-210ENST00000547654 RRAGCQ9HB90 399 aa8.56□□□□□ -1.04
SCAF11-210ENST00000547654 CEP126Q9P2H0 1117 aa8.56□□□□□ -1.04
SCAF11-210ENST00000547654 GDF2Q9UK05 429 aaPredicted RBP8.56□□□□□ -1.04
SCAF11-210ENST00000547654 THBS1P07996 1170 aa8.55□□□□□ -1.04
SCAF11-210ENST00000547654 MKL2Q9ULH7 1088 aa8.55□□□□□ -1.04
SCAF11-210ENST00000547654 DOLKQ9UPQ8 538 aa8.55□□□□□ -1.04
SCAF11-210ENST00000547654 SHISA8B8ZZ34 492 aa8.54□□□□□ -1.04
SCAF11-210ENST00000547654 BMP4P12644 408 aa8.54□□□□□ -1.04
SCAF11-210ENST00000547654 SNRPNP63162 240 aaKnown RBP8.54□□□□□ -1.04
SCAF11-210ENST00000547654 C4orf17Q53FE4 359 aa8.54□□□□□ -1.04
SCAF11-210ENST00000547654 GOLGA6L1Q8N7Z2 621 aa8.54□□□□□ -1.04
SCAF11-210ENST00000547654 KLRG1Q96E93 195 aa8.54□□□□□ -1.04
SCAF11-210ENST00000547654 XAGE2Q96GT9 111 aa8.54□□□□□ -1.04
SCAF11-210ENST00000547654 FHDC1Q9C0D6 1143 aaPredicted RBP8.54□□□□□ -1.04
SCAF11-210ENST00000547654 ATXN7L1Q9ULK2 861 aaPredicted RBP8.54□□□□□ -1.04
SCAF11-210ENST00000547654 PROCP04070 461 aa8.53□□□□□ -1.04
SCAF11-210ENST00000547654 ITGB2P05107 769 aa8.53□□□□□ -1.04
SCAF11-210ENST00000547654 AMPD1P23109 780 aa8.53□□□□□ -1.04
SCAF11-210ENST00000547654 MSX1P28360 303 aa8.53□□□□□ -1.04
SCAF11-210ENST00000547654 EIF4G2P78344 907 aaKnown RBP eCLIP8.53□□□□□ -1.04
SCAF11-210ENST00000547654 MCM6Q14566 821 aa8.53□□□□□ -1.04
SCAF11-210ENST00000547654 TLR1Q15399 786 aa8.53□□□□□ -1.04
SCAF11-210ENST00000547654 PRM3Q9NNZ6 103 aa8.53□□□□□ -1.04
SCAF11-210ENST00000547654 HRH3Q9Y5N1 445 aa8.53□□□□□ -1.04
SCAF11-210ENST00000547654 USP4Q13107 963 aa8.52□□□□□ -1.05
SCAF11-210ENST00000547654 SLFNL1Q499Z3 407 aa8.52□□□□□ -1.05
SCAF11-210ENST00000547654 RHBDD1Q8TEB9 315 aa8.52□□□□□ -1.05
SCAF11-210ENST00000547654 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
SCAF11-210ENST00000547654 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
SCAF11-210ENST00000547654 ALYREFQ86V81 257 aaKnown RBP8.51□□□□□ -1.05
SCAF11-210ENST00000547654 RNF135Q8IUD6 432 aa8.51□□□□□ -1.05
SCAF11-210ENST00000547654 EDARADDQ8WWZ3 215 aa8.51□□□□□ -1.05
SCAF11-210ENST00000547654 KRTAP9-9Q9BYP9 154 aa8.51□□□□□ -1.05
SCAF11-210ENST00000547654 KRTAP9-4Q9BYQ2 154 aa8.51□□□□□ -1.05
SCAF11-210ENST00000547654 ETNK1Q9HBU6 452 aa8.51□□□□□ -1.05
SCAF11-210ENST00000547654 TBC1D2BQ9UPU7 963 aa8.51□□□□□ -1.05
SCAF11-210ENST00000547654 FGFR3P22607 806 aa8.5□□□□□ -1.05
SCAF11-210ENST00000547654 SLCO4C1Q6ZQN7 724 aa8.5□□□□□ -1.05
SCAF11-210ENST00000547654 TBC1D9Q6ZT07 1266 aa8.5□□□□□ -1.05
SCAF11-210ENST00000547654 KRTAP4-12Q9BQ66 201 aa8.5□□□□□ -1.05
SCAF11-210ENST00000547654 PIK3R2O00459 728 aa8.49□□□□□ -1.05
SCAF11-210ENST00000547654 PLA2G4AP47712 749 aa8.49□□□□□ -1.05
SCAF11-210ENST00000547654 UBAP2LQ14157 1087 aaKnown RBP8.49□□□□□ -1.05
SCAF11-210ENST00000547654 C1orf229Q6ZS94 237 aaPredicted RBP8.49□□□□□ -1.05
SCAF11-210ENST00000547654 PPARGC1BQ86YN6 1023 aaKnown RBP8.49□□□□□ -1.05
SCAF11-210ENST00000547654 SIRT1Q96EB6 747 aa8.49□□□□□ -1.05
SCAF11-210ENST00000547654 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
SCAF11-210ENST00000547654 GRIN2CQ14957 1233 aa8.48□□□□□ -1.05
SCAF11-210ENST00000547654 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
SCAF11-210ENST00000547654 FIGNL1Q6PIW4 674 aa8.48□□□□□ -1.05
SCAF11-210ENST00000547654 GGA1Q9UJY5 639 aa8.48□□□□□ -1.05
SCAF11-210ENST00000547654 KRBA1A5PL33 1030 aa8.47□□□□□ -1.05
SCAF11-210ENST00000547654 K7ELQ4 463 aaPredicted RBP8.47□□□□□ -1.05
SCAF11-210ENST00000547654 CRISPLD1Q9H336 500 aa8.47□□□□□ -1.05
SCAF11-210ENST00000547654 BNIP3LO60238 219 aa8.46□□□□□ -1.06
SCAF11-210ENST00000547654 TSGA10IPQ3SY00 556 aa8.46□□□□□ -1.06
SCAF11-210ENST00000547654 C2CD2LO14523 706 aa8.45□□□□□ -1.06
SCAF11-210ENST00000547654 COL8A1P27658 744 aa8.45□□□□□ -1.06
SCAF11-210ENST00000547654 BAG6P46379 1132 aa8.45□□□□□ -1.06
SCAF11-210ENST00000547654 CTBSQ01459 385 aa8.45□□□□□ -1.06
SCAF11-210ENST00000547654 PHTF2Q8N3S3 785 aa8.45□□□□□ -1.06
SCAF11-210ENST00000547654 NDFIP2Q9NV92 336 aa8.45□□□□□ -1.06
SCAF11-210ENST00000547654 CHIC2Q9UKJ5 165 aa8.45□□□□□ -1.06
SCAF11-210ENST00000547654 GNB5O14775 395 aa8.44□□□□□ -1.06
SCAF11-210ENST00000547654 ARAFP10398 606 aa8.44□□□□□ -1.06
SCAF11-210ENST00000547654 GDF10P55107 478 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms