RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 TGFB2P61812 414 aa12.53□□□□□ -0.4
AC055716.3-201ENST00000547533 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
AC055716.3-201ENST00000547533 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
AC055716.3-201ENST00000547533 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
AC055716.3-201ENST00000547533 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
AC055716.3-201ENST00000547533 ADCY9O60503 1353 aa12.53□□□□□ -0.4
AC055716.3-201ENST00000547533 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
AC055716.3-201ENST00000547533 MMP10P09238 476 aa12.52□□□□□ -0.41
AC055716.3-201ENST00000547533 RFC4P35249 363 aa12.52□□□□□ -0.41
AC055716.3-201ENST00000547533 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
AC055716.3-201ENST00000547533 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
AC055716.3-201ENST00000547533 DCAF5Q96JK2 942 aa12.52□□□□□ -0.41
AC055716.3-201ENST00000547533 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
AC055716.3-201ENST00000547533 WWC3Q9ULE0 1092 aa12.52□□□□□ -0.41
AC055716.3-201ENST00000547533 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
AC055716.3-201ENST00000547533 TNNT2P45379 298 aaPredicted RBP12.51□□□□□ -0.41
AC055716.3-201ENST00000547533 C1orf141Q5JVX7 400 aa12.51□□□□□ -0.41
AC055716.3-201ENST00000547533 ATG3Q9NT62 314 aa12.51□□□□□ -0.41
AC055716.3-201ENST00000547533 POLKQ9UBT6 870 aa12.51□□□□□ -0.41
AC055716.3-201ENST00000547533 PARP3Q9Y6F1 533 aa12.51□□□□□ -0.41
AC055716.3-201ENST00000547533 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
AC055716.3-201ENST00000547533 CABP4P57796 275 aa12.5□□□□□ -0.41
AC055716.3-201ENST00000547533 ITPK1Q13572 414 aa12.5□□□□□ -0.41
AC055716.3-201ENST00000547533 RC3H1Q5TC82 1133 aaKnown RBP12.5□□□□□ -0.41
AC055716.3-201ENST00000547533 BCS1LQ9Y276 419 aa12.5□□□□□ -0.41
AC055716.3-201ENST00000547533 COL5A3P25940 1745 aaPredicted RBP12.5□□□□□ -0.41
AC055716.3-201ENST00000547533 C4AP0C0L4 1744 aa12.49□□□□□ -0.41
AC055716.3-201ENST00000547533 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
AC055716.3-201ENST00000547533 C16orf71Q8IYS4 520 aaPredicted RBP12.49□□□□□ -0.41
AC055716.3-201ENST00000547533 CNTNAP4Q9C0A0 1308 aa12.48□□□□□ -0.41
AC055716.3-201ENST00000547533 APLP1P51693 650 aa12.48□□□□□ -0.41
AC055716.3-201ENST00000547533 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
AC055716.3-201ENST00000547533 ARHGAP27Q6ZUM4 889 aa12.48□□□□□ -0.41
AC055716.3-201ENST00000547533 AMIGO3Q86WK7 504 aa12.48□□□□□ -0.41
AC055716.3-201ENST00000547533 ARFGEF1Q9Y6D6 1849 aa12.48□□□□□ -0.41
AC055716.3-201ENST00000547533 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
AC055716.3-201ENST00000547533 CLSPNQ9HAW4 1339 aa12.47□□□□□ -0.41
AC055716.3-201ENST00000547533 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
AC055716.3-201ENST00000547533 FCHSD2O94868 740 aa12.47□□□□□ -0.41
AC055716.3-201ENST00000547533 MTHFSP49914 203 aa12.47□□□□□ -0.41
AC055716.3-201ENST00000547533 SMIM5Q71RC9 77 aa12.47□□□□□ -0.41
AC055716.3-201ENST00000547533 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
AC055716.3-201ENST00000547533 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
AC055716.3-201ENST00000547533 KDRP35968 1356 aa12.46□□□□□ -0.41
AC055716.3-201ENST00000547533 TOMM70O94826 608 aa12.46□□□□□ -0.41
AC055716.3-201ENST00000547533 EIF4G2P78344 907 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC055716.3-201ENST00000547533 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
AC055716.3-201ENST00000547533 BRCA1P38398 1863 aaKnown RBP12.46□□□□□ -0.42
AC055716.3-201ENST00000547533 A0A0G2JLW4 131 aa12.45□□□□□ -0.42
AC055716.3-201ENST00000547533 MORC1Q86VD1 984 aa12.45□□□□□ -0.42
AC055716.3-201ENST00000547533 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
AC055716.3-201ENST00000547533 KIAA1551Q9HCM1 1747 aa12.45□□□□□ -0.42
AC055716.3-201ENST00000547533 KIF3CO14782 793 aa12.44□□□□□ -0.42
AC055716.3-201ENST00000547533 GYS1P13807 737 aa12.44□□□□□ -0.42
AC055716.3-201ENST00000547533 SCN11AQ9UI33 1791 aa12.43□□□□□ -0.42
AC055716.3-201ENST00000547533 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
AC055716.3-201ENST00000547533 KDM2BQ8NHM5 1336 aa12.43□□□□□ -0.42
AC055716.3-201ENST00000547533 PTCD1O75127 700 aaKnown RBP12.43□□□□□ -0.42
AC055716.3-201ENST00000547533 ZPR1O75312 459 aa12.43□□□□□ -0.42
AC055716.3-201ENST00000547533 DPEP1P16444 411 aa12.43□□□□□ -0.42
AC055716.3-201ENST00000547533 DALRD3Q5D0E6 543 aaKnown RBP12.43□□□□□ -0.42
AC055716.3-201ENST00000547533 PANK3Q9H999 370 aa12.43□□□□□ -0.42
AC055716.3-201ENST00000547533 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
AC055716.3-201ENST00000547533 VIRMAQ69YN4 1812 aaKnown RBP12.42□□□□□ -0.42
AC055716.3-201ENST00000547533 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
AC055716.3-201ENST00000547533 KDM6AO15550 1401 aaPredicted RBP12.41□□□□□ -0.42
AC055716.3-201ENST00000547533 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
AC055716.3-201ENST00000547533 TNRC6CQ9HCJ0 1690 aaKnown RBP12.41□□□□□ -0.42
AC055716.3-201ENST00000547533 USP42Q9H9J4 1324 aaKnown RBP12.4□□□□□ -0.42
AC055716.3-201ENST00000547533 C9orf131Q5VYM1 1079 aa12.4□□□□□ -0.42
AC055716.3-201ENST00000547533 SULT6B1Q6IMI4 303 aa12.4□□□□□ -0.42
AC055716.3-201ENST00000547533 RBM46Q8TBY0 533 aaKnown RBP12.4□□□□□ -0.42
AC055716.3-201ENST00000547533 SLC4A9Q96Q91 983 aa12.4□□□□□ -0.42
AC055716.3-201ENST00000547533 PCGF6Q9BYE7 350 aa12.4□□□□□ -0.42
AC055716.3-201ENST00000547533 WDR90Q96KV7 1748 aa12.4□□□□□ -0.43
AC055716.3-201ENST00000547533 FSTL1Q12841 308 aa12.39□□□□□ -0.43
AC055716.3-201ENST00000547533 AKAP4Q5JQC9 854 aa12.39□□□□□ -0.43
AC055716.3-201ENST00000547533 TJP1Q07157 1748 aa12.39□□□□□ -0.43
AC055716.3-201ENST00000547533 SBF1O95248 1867 aa12.38□□□□□ -0.43
AC055716.3-201ENST00000547533 RNF181Q9P0P0 153 aa12.38□□□□□ -0.43
AC055716.3-201ENST00000547533 HSPA5P11021 654 aaKnown RBP12.37□□□□□ -0.43
AC055716.3-201ENST00000547533 FKBP8Q14318 412 aa12.37□□□□□ -0.43
AC055716.3-201ENST00000547533 NPM2Q86SE8 214 aaKnown RBP12.37□□□□□ -0.43
AC055716.3-201ENST00000547533 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
AC055716.3-201ENST00000547533 NMRK2Q9NPI5 230 aa12.37□□□□□ -0.43
AC055716.3-201ENST00000547533 SRP68Q9UHB9 627 aaKnown RBP12.37□□□□□ -0.43
AC055716.3-201ENST00000547533 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
AC055716.3-201ENST00000547533 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
AC055716.3-201ENST00000547533 AFDNP55196 1824 aaKnown RBP12.36□□□□□ -0.43
AC055716.3-201ENST00000547533 KCNA3P22001 575 aa12.35□□□□□ -0.43
AC055716.3-201ENST00000547533 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
AC055716.3-201ENST00000547533 TTC5Q8N0Z6 440 aa12.35□□□□□ -0.43
AC055716.3-201ENST00000547533 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
AC055716.3-201ENST00000547533 DLEC1Q9Y238 1755 aa12.34□□□□□ -0.43
AC055716.3-201ENST00000547533 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
AC055716.3-201ENST00000547533 A0A087WZG4 1122 aa12.34□□□□□ -0.43
AC055716.3-201ENST00000547533 POLRMTO00411 1230 aaKnown RBP12.34□□□□□ -0.43
AC055716.3-201ENST00000547533 IL13P35225 146 aa12.34□□□□□ -0.43
AC055716.3-201ENST00000547533 DDR1Q08345 913 aa12.34□□□□□ -0.43
AC055716.3-201ENST00000547533 DNAJC10Q8IXB1 793 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms