RNA–Protein interactions for RNA: ENST00000546509.5

ERGIC2-202, Transcript of ERGIC and golgi 2, humanhuman

TSL 3

Gene ERGIC2, Length 308 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-202ENST00000546509 TRERF1Q96PN7 1200 aa12.94□□□□□ -0.34
ERGIC2-202ENST00000546509 A0A1B0GTH6 734 aa12.93□□□□□ -0.34
ERGIC2-202ENST00000546509 PIK3CDO00329 1044 aa12.93□□□□□ -0.34
ERGIC2-202ENST00000546509 INHAP05111 366 aa12.93□□□□□ -0.34
ERGIC2-202ENST00000546509 GDF10P55107 478 aa12.93□□□□□ -0.34
ERGIC2-202ENST00000546509 ZNF385CQ66K41 422 aaPredicted RBP12.93□□□□□ -0.34
ERGIC2-202ENST00000546509 GTPBP3Q969Y2 492 aaKnown RBP12.93□□□□□ -0.34
ERGIC2-202ENST00000546509 GPR25O00155 361 aa12.92□□□□□ -0.34
ERGIC2-202ENST00000546509 ADAMTS2O95450 1211 aa12.92□□□□□ -0.34
ERGIC2-202ENST00000546509 SCNN1DP51172 638 aa12.92□□□□□ -0.34
ERGIC2-202ENST00000546509 C4orf17Q53FE4 359 aa12.92□□□□□ -0.34
ERGIC2-202ENST00000546509 PPARGC1BQ86YN6 1023 aaKnown RBP12.92□□□□□ -0.34
ERGIC2-202ENST00000546509 NFATC2IPQ8NCF5 419 aa12.92□□□□□ -0.34
ERGIC2-202ENST00000546509 RHBDD1Q8TEB9 315 aa12.92□□□□□ -0.34
ERGIC2-202ENST00000546509 NUCKS1Q9H1E3 243 aaKnown RBP12.92□□□□□ -0.34
ERGIC2-202ENST00000546509 LZTS3O60299 673 aaPredicted RBP12.91□□□□□ -0.34
ERGIC2-202ENST00000546509 SKIP12755 728 aa12.91□□□□□ -0.34
ERGIC2-202ENST00000546509 EML3Q32P44 896 aa12.91□□□□□ -0.34
ERGIC2-202ENST00000546509 MBIPQ9NS73 344 aa12.91□□□□□ -0.34
ERGIC2-202ENST00000546509 WHAMMQ8TF30 809 aa12.89□□□□□ -0.35
ERGIC2-202ENST00000546509 GPAMQ9HCL2 828 aa12.89□□□□□ -0.35
ERGIC2-202ENST00000546509 CSB-PGBD3P0DP91 1061 aa12.88□□□□□ -0.35
ERGIC2-202ENST00000546509 PGBD3Q8N328 593 aa12.88□□□□□ -0.35
ERGIC2-202ENST00000546509 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
ERGIC2-202ENST00000546509 NOD1Q9Y239 953 aa12.88□□□□□ -0.35
ERGIC2-202ENST00000546509 SMTNP53814 917 aa12.87□□□□□ -0.35
ERGIC2-202ENST00000546509 MSX1P28360 303 aa12.86□□□□□ -0.35
ERGIC2-202ENST00000546509 LBRQ14739 615 aaKnown RBP12.86□□□□□ -0.35
ERGIC2-202ENST00000546509 PCDHGA11Q9Y5H2 935 aa12.86□□□□□ -0.35
ERGIC2-202ENST00000546509 IGF1RP08069 1367 aa12.85□□□□□ -0.35
ERGIC2-202ENST00000546509 MAP3K10Q02779 954 aa12.85□□□□□ -0.35
ERGIC2-202ENST00000546509 SERTAD1Q9UHV2 236 aa12.85□□□□□ -0.35
ERGIC2-202ENST00000546509 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
ERGIC2-202ENST00000546509 POM121CA8CG34 1229 aa12.84□□□□□ -0.35
ERGIC2-202ENST00000546509 ARHGEF15O94989 841 aa12.84□□□□□ -0.35
ERGIC2-202ENST00000546509 NCOA4Q13772 614 aa12.84□□□□□ -0.35
ERGIC2-202ENST00000546509 LYPD4Q6UWN0 246 aa12.84□□□□□ -0.35
ERGIC2-202ENST00000546509 SLC4A9Q96Q91 983 aa12.84□□□□□ -0.35
ERGIC2-202ENST00000546509 USP17L5A8MUK1 530 aa12.83□□□□□ -0.36
ERGIC2-202ENST00000546509 TMEM229AB2RXF0 380 aa12.83□□□□□ -0.36
ERGIC2-202ENST00000546509 MX2P20592 715 aa12.83□□□□□ -0.36
ERGIC2-202ENST00000546509 PLA2G4AP47712 749 aa12.83□□□□□ -0.36
ERGIC2-202ENST00000546509 GTF2IP78347 998 aa12.83□□□□□ -0.36
ERGIC2-202ENST00000546509 TBC1D9Q6ZT07 1266 aa12.83□□□□□ -0.36
ERGIC2-202ENST00000546509 CFHR5Q9BXR6 569 aa12.83□□□□□ -0.36
ERGIC2-202ENST00000546509 NIFKQ9BYG3 293 aaKnown RBP12.83□□□□□ -0.36
ERGIC2-202ENST00000546509 PHF24Q9UPV7 400 aa12.83□□□□□ -0.36
ERGIC2-202ENST00000546509 EFHC2Q5JST6 749 aa12.82□□□□□ -0.36
ERGIC2-202ENST00000546509 HDGFL1Q5TGJ6 251 aa12.82□□□□□ -0.36
ERGIC2-202ENST00000546509 RUBCNLQ9H714 662 aa12.82□□□□□ -0.36
ERGIC2-202ENST00000546509 RNF225M0QZC1 329 aaPredicted RBP12.81□□□□□ -0.36
ERGIC2-202ENST00000546509 BACH1O14867 736 aa12.81□□□□□ -0.36
ERGIC2-202ENST00000546509 THBS1P07996 1170 aa12.81□□□□□ -0.36
ERGIC2-202ENST00000546509 CELA2BP08218 269 aaPredicted RBP12.81□□□□□ -0.36
ERGIC2-202ENST00000546509 PSME1Q06323 249 aa12.81□□□□□ -0.36
ERGIC2-202ENST00000546509 KCNMA1Q12791 1236 aa12.81□□□□□ -0.36
ERGIC2-202ENST00000546509 ENAMQ9NRM1 1142 aa12.81□□□□□ -0.36
ERGIC2-202ENST00000546509 A6NJY4 79 aa12.8□□□□□ -0.36
ERGIC2-202ENST00000546509 CDK2AP1O14519 115 aa12.8□□□□□ -0.36
ERGIC2-202ENST00000546509 MTFR1Q15390 333 aa12.8□□□□□ -0.36
ERGIC2-202ENST00000546509 DEPDC4Q8N2C3 294 aa12.8□□□□□ -0.36
ERGIC2-202ENST00000546509 C1orf216Q8TAB5 229 aa12.8□□□□□ -0.36
ERGIC2-202ENST00000546509 ADAMTS19Q8TE59 1207 aa12.8□□□□□ -0.36
ERGIC2-202ENST00000546509 MARSP56192 900 aaKnown RBP12.79□□□□□ -0.36
ERGIC2-202ENST00000546509 TRIM50Q86XT4 487 aa12.79□□□□□ -0.36
ERGIC2-202ENST00000546509 CRISPLD1Q9H336 500 aa12.79□□□□□ -0.36
ERGIC2-202ENST00000546509 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
ERGIC2-202ENST00000546509 PLEKHM2Q8IWE5 1019 aa12.77□□□□□ -0.37
ERGIC2-202ENST00000546509 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
ERGIC2-202ENST00000546509 BCRP11274 1271 aa12.76□□□□□ -0.37
ERGIC2-202ENST00000546509 MAP2K3P46734 347 aa12.76□□□□□ -0.37
ERGIC2-202ENST00000546509 UBAP2LQ14157 1087 aaKnown RBP12.76□□□□□ -0.37
ERGIC2-202ENST00000546509 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
ERGIC2-202ENST00000546509 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
ERGIC2-202ENST00000546509 IQSEC3Q9UPP2 1182 aaPredicted RBP12.76□□□□□ -0.37
ERGIC2-202ENST00000546509 ACDQ96AP0 544 aa12.75□□□□□ -0.37
ERGIC2-202ENST00000546509 UCN2Q96RP3 112 aa12.75□□□□□ -0.37
ERGIC2-202ENST00000546509 ZNF358Q9NW07 568 aa12.75□□□□□ -0.37
ERGIC2-202ENST00000546509 CABP1Q9NZU7 370 aa12.75□□□□□ -0.37
ERGIC2-202ENST00000546509 ATXN7L1Q9ULK2 861 aaPredicted RBP12.75□□□□□ -0.37
ERGIC2-202ENST00000546509 USP17L3A6NCW0 530 aa12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 USP17L4A6NCW7 530 aa12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 ATP9BO43861 1147 aa12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 ATP1A2P50993 1020 aa12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 FIGNL1Q6PIW4 674 aa12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 USP17L1Q7RTZ2 530 aa12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 FNBP4Q8N3X1 1017 aaPredicted RBP12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 SCARF2Q96GP6 870 aaPredicted RBP12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
ERGIC2-202ENST00000546509 ATP4AP20648 1035 aa12.73□□□□□ -0.37
ERGIC2-202ENST00000546509 ZNF295-AS1Q8N0V1 137 aa12.73□□□□□ -0.37
ERGIC2-202ENST00000546509 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
ERGIC2-202ENST00000546509 GSK3AP49840 483 aa12.72□□□□□ -0.37
ERGIC2-202ENST00000546509 NLRP8Q86W28 1048 aa12.72□□□□□ -0.37
ERGIC2-202ENST00000546509 SCHIP1Q9P0W5 487 aaPredicted RBP12.72□□□□□ -0.37
ERGIC2-202ENST00000546509 RASSF7Q02833 373 aa12.71□□□□□ -0.37
ERGIC2-202ENST00000546509 ARSJQ5FYB0 599 aaPredicted RBP12.71□□□□□ -0.37
ERGIC2-202ENST00000546509 ABHD17AQ96GS6 310 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms