RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 CASQ1P31415 396 aa10.59□□□□□ -0.71
TSC1-208ENST00000545250 FAM177A1Q8N128 213 aaPredicted RBP10.59□□□□□ -0.71
TSC1-208ENST00000545250 CRACR2BQ8N4Y2 399 aaPredicted RBP10.59□□□□□ -0.71
TSC1-208ENST00000545250 MAP7Q14244 749 aa10.59□□□□□ -0.71
TSC1-208ENST00000545250 TDO2P48775 406 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 NUP155O75694 1391 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 PPFIA2O75334 1257 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 TACC1O75410 805 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 USH1CQ9Y6N9 552 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 BAG4O95429 457 aaKnown RBP10.58□□□□□ -0.72
TSC1-208ENST00000545250 GNAI3P08754 354 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 CCDC30Q5VVM6 783 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 MIPOL1Q8TD10 442 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.58□□□□□ -0.727e-6■■■■□ 21
TSC1-208ENST00000545250 ZFYP08048 801 aaPredicted RBP10.58□□□□□ -0.72
TSC1-208ENST00000545250 GABPB2Q8TAK5 448 aaPredicted RBP10.58□□□□□ -0.72
TSC1-208ENST00000545250 C16orf71Q8IYS4 520 aaPredicted RBP10.58□□□□□ -0.72
TSC1-208ENST00000545250 UBXN4Q92575 508 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 KRT85P78386 507 aa10.58□□□□□ -0.72
TSC1-208ENST00000545250 CKAP4Q07065 602 aaKnown RBP10.58□□□□□ -0.72
TSC1-208ENST00000545250 CEP120Q8N960 986 aa10.57□□□□□ -0.72
TSC1-208ENST00000545250 ERCC6LQ2NKX8 1250 aa10.57□□□□□ -0.72
TSC1-208ENST00000545250 CWC25Q9NXE8 425 aaPredicted RBP10.57□□□□□ -0.72
TSC1-208ENST00000545250 GPRASP1Q5JY77 1395 aa10.57□□□□□ -0.72
TSC1-208ENST00000545250 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
TSC1-208ENST00000545250 ALDH3A1P30838 453 aa10.57□□□□□ -0.72
TSC1-208ENST00000545250 SARNPP82979 210 aaKnown RBP10.57□□□□□ -0.72
TSC1-208ENST00000545250 SPC24Q8NBT2 197 aa10.57□□□□□ -0.72
TSC1-208ENST00000545250 PSPC1Q8WXF1 523 aaKnown RBP10.57□□□□□ -0.72
TSC1-208ENST00000545250 TTC14Q96N46 770 aa10.57□□□□□ -0.72
TSC1-208ENST00000545250 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.57□□□□□ -0.72
TSC1-208ENST00000545250 NLRP2Q9NX02 1062 aa10.57□□□□□ -0.72
TSC1-208ENST00000545250 CYP46A1Q9Y6A2 500 aa10.57□□□□□ -0.72
TSC1-208ENST00000545250 ATP2A1O14983 1001 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 TXNDC16Q9P2K2 825 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 ANKS4BQ8N8V4 417 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 PFDN4Q9NQP4 134 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 XPCQ01831 940 aaPredicted RBP10.56□□□□□ -0.72
TSC1-208ENST00000545250 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 CEP83Q9Y592 693 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 MGEA5O60502 916 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 CCDC144CPQ8IYA2 1237 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 PRPHP41219 470 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 RASAL2Q9UJF2 1139 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 MYBBP1AQ9BQG0 1328 aaKnown RBP10.56□□□□□ -0.72
TSC1-208ENST00000545250 CRCPO75575 148 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 ATF7IPQ6VMQ6 1270 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 UBA5Q9GZZ9 404 aa10.56□□□□□ -0.72
TSC1-208ENST00000545250 HSPA4P34932 840 aa10.55□□□□□ -0.72
TSC1-208ENST00000545250 TBC1D5Q92609 795 aa10.55□□□□□ -0.72
TSC1-208ENST00000545250 UPF3BQ9BZI7 483 aaKnown RBP10.55□□□□□ -0.72
TSC1-208ENST00000545250 B4DLN1 442 aa10.55□□□□□ -0.72
TSC1-208ENST00000545250 MRPL12P52815 198 aaKnown RBP10.55□□□□□ -0.72
TSC1-208ENST00000545250 VTI1AQ96AJ9 217 aa10.55□□□□□ -0.72
TSC1-208ENST00000545250 ZNF652Q9Y2D9 606 aa10.55□□□□□ -0.72
TSC1-208ENST00000545250 CEBPZQ03701 1054 aaKnown RBP10.55□□□□□ -0.72
TSC1-208ENST00000545250 TTC16Q8NEE8 873 aa10.55□□□□□ -0.72
TSC1-208ENST00000545250 RBM42Q9BTD8 480 aaKnown RBP10.55□□□□□ -0.72
TSC1-208ENST00000545250 ERCC5P28715 1186 aaPredicted RBP10.55□□□□□ -0.72
TSC1-208ENST00000545250 MSANTD4Q8NCY6 345 aa10.55□□□□□ -0.72
TSC1-208ENST00000545250 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
TSC1-208ENST00000545250 HLTFQ14527 1009 aaKnown RBP eCLIP10.55□□□□□ -0.721e-6■■■■□ 24.4
TSC1-208ENST00000545250 HAUS7Q99871 368 aa10.55□□□□□ -0.72
TSC1-208ENST00000545250 SPC25Q9HBM1 224 aa10.55□□□□□ -0.72
TSC1-208ENST00000545250 FAM177BA6PVY3 158 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 SIN3AQ96ST3 1273 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 PYM1Q9BRP8 204 aaKnown RBP10.54□□□□□ -0.72
TSC1-208ENST00000545250 CCDC196A0A1B0GTZ2 297 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 AMPD3Q01432 767 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 C22orf23Q9BZE7 217 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 PUF60Q9UHX1 559 aaKnown RBP10.54□□□□□ -0.72
TSC1-208ENST00000545250 STX6O43752 255 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 KRT32Q14532 448 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 KMT5BQ4FZB7 885 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 AFAP1L2Q8N4X5 818 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 WDR33Q9C0J8 1336 aaKnown RBP10.54□□□□□ -0.72
TSC1-208ENST00000545250 CCDC77Q9BR77 488 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 LRRC27Q9C0I9 530 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 ATP2A2P16615 1042 aaKnown RBP10.54□□□□□ -0.72
TSC1-208ENST00000545250 CALCOCO1Q9P1Z2 691 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 ARID4AP29374 1257 aaPredicted RBP10.54□□□□□ -0.72
TSC1-208ENST00000545250 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
TSC1-208ENST00000545250 PLEKHO1Q53GL0 409 aaPredicted RBP10.54□□□□□ -0.72
TSC1-208ENST00000545250 A0A087WZG4 1122 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 RIPK4P57078 832 aa10.54□□□□□ -0.72
TSC1-208ENST00000545250 KIAA0753Q2KHM9 967 aa10.53□□□□□ -0.72
TSC1-208ENST00000545250 SYCP3Q8IZU3 236 aa10.53□□□□□ -0.72
TSC1-208ENST00000545250 CCDC63Q8NA47 563 aa10.53□□□□□ -0.72
TSC1-208ENST00000545250 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
TSC1-208ENST00000545250 CFAP157Q5JU67 520 aa10.53□□□□□ -0.72
TSC1-208ENST00000545250 TACC3Q9Y6A5 838 aa10.53□□□□□ -0.72
TSC1-208ENST00000545250 RNF214Q8ND24 703 aa10.53□□□□□ -0.72
TSC1-208ENST00000545250 CCDC12Q8WUD4 166 aaPredicted RBP10.53□□□□□ -0.72
TSC1-208ENST00000545250 CASQ2O14958 399 aaPredicted RBP10.53□□□□□ -0.72
TSC1-208ENST00000545250 CTR9Q6PD62 1173 aa10.53□□□□□ -0.72
TSC1-208ENST00000545250 GAS2L2Q8NHY3 880 aa10.52□□□□□ -0.72
TSC1-208ENST00000545250 PDE4AP27815 886 aa10.52□□□□□ -0.72
TSC1-208ENST00000545250 SH2D4BQ5SQS7 431 aa10.52□□□□□ -0.72
TSC1-208ENST00000545250 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms