RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 ARFGEF1Q9Y6D6 1849 aa16.05■□□□□ 0.16
TMEM258-208ENST00000545210 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
TMEM258-208ENST00000545210 ZNF831Q5JPB2 1677 aa16.05■□□□□ 0.16
TMEM258-208ENST00000545210 ATP6V1AP38606 617 aa16.05■□□□□ 0.16
TMEM258-208ENST00000545210 APLP1P51693 650 aa16.04■□□□□ 0.16
TMEM258-208ENST00000545210 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
TMEM258-208ENST00000545210 CARD14Q9BXL6 1004 aa16.03■□□□□ 0.16
TMEM258-208ENST00000545210 BCS1LQ9Y276 419 aa16.03■□□□□ 0.16
TMEM258-208ENST00000545210 MYH14Q7Z406 1995 aaKnown RBP16.02■□□□□ 0.16
TMEM258-208ENST00000545210 TOMM70O94826 608 aa16.02■□□□□ 0.16
TMEM258-208ENST00000545210 ATG3Q9NT62 314 aa16.02■□□□□ 0.16
TMEM258-208ENST00000545210 PHKG2P15735 406 aa16.01■□□□□ 0.15
TMEM258-208ENST00000545210 TGFB2P61812 414 aa16.01■□□□□ 0.15
TMEM258-208ENST00000545210 ARHGAP27Q6ZUM4 889 aa16.01■□□□□ 0.15
TMEM258-208ENST00000545210 DNAJC5GQ8N7S2 189 aa16.01■□□□□ 0.15
TMEM258-208ENST00000545210 EYA1Q99502 592 aa16.01■□□□□ 0.15
TMEM258-208ENST00000545210 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.15
TMEM258-208ENST00000545210 C10orf71Q711Q0 1435 aa16.01■□□□□ 0.15
TMEM258-208ENST00000545210 SBF1O95248 1867 aa16■□□□□ 0.15
TMEM258-208ENST00000545210 IFNL2Q8IZJ0 200 aa16■□□□□ 0.15
TMEM258-208ENST00000545210 NMRK2Q9NPI5 230 aa16■□□□□ 0.15
TMEM258-208ENST00000545210 KDRP35968 1356 aa16■□□□□ 0.15
TMEM258-208ENST00000545210 WASHC2AQ641Q2 1341 aa15.99■□□□□ 0.15
TMEM258-208ENST00000545210 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
TMEM258-208ENST00000545210 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
TMEM258-208ENST00000545210 NLGN1Q8N2Q7 840 aa15.99■□□□□ 0.15
TMEM258-208ENST00000545210 RTCBQ9Y3I0 505 aaKnown RBP15.99■□□□□ 0.15
TMEM258-208ENST00000545210 DPEP1P16444 411 aa15.98■□□□□ 0.15
TMEM258-208ENST00000545210 FCHSD2O94868 740 aa15.97■□□□□ 0.15
TMEM258-208ENST00000545210 ARHGEF1Q92888 912 aaKnown RBP15.97■□□□□ 0.15
TMEM258-208ENST00000545210 SLC4A9Q96Q91 983 aa15.97■□□□□ 0.15
TMEM258-208ENST00000545210 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
TMEM258-208ENST00000545210 GYS1P13807 737 aa15.96■□□□□ 0.15
TMEM258-208ENST00000545210 CCDC87Q9NVE4 849 aa15.96■□□□□ 0.15
TMEM258-208ENST00000545210 PCNTO95613 3336 aa15.96■□□□□ 0.14
TMEM258-208ENST00000545210 TNRC6CQ9HCJ0 1690 aaKnown RBP15.95■□□□□ 0.14
TMEM258-208ENST00000545210 RFC4P35249 363 aa15.95■□□□□ 0.14
TMEM258-208ENST00000545210 POLKQ9UBT6 870 aa15.95■□□□□ 0.14
TMEM258-208ENST00000545210 PARP3Q9Y6F1 533 aa15.95■□□□□ 0.14
TMEM258-208ENST00000545210 ADRA2BP18089 450 aa15.94■□□□□ 0.14
TMEM258-208ENST00000545210 KCNA3P22001 575 aa15.94■□□□□ 0.14
TMEM258-208ENST00000545210 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
TMEM258-208ENST00000545210 C9orf131Q5VYM1 1079 aa15.94■□□□□ 0.14
TMEM258-208ENST00000545210 TJP1Q07157 1748 aa15.94■□□□□ 0.14
TMEM258-208ENST00000545210 KCPQ6ZWJ8 1503 aa15.94■□□□□ 0.14
TMEM258-208ENST00000545210 CCDC88AQ3V6T2 1871 aa15.93■□□□□ 0.14
TMEM258-208ENST00000545210 ERVV-2B6SEH9 535 aa15.93■□□□□ 0.14
TMEM258-208ENST00000545210 HTRA3P83110 453 aa15.93■□□□□ 0.14
TMEM258-208ENST00000545210 EIF4A2Q14240 407 aaKnown RBP15.93■□□□□ 0.14
TMEM258-208ENST00000545210 C16orf71Q8IYS4 520 aaPredicted RBP15.93■□□□□ 0.14
TMEM258-208ENST00000545210 RBM46Q8TBY0 533 aaKnown RBP15.93■□□□□ 0.14
TMEM258-208ENST00000545210 VIRMAQ69YN4 1812 aaKnown RBP15.93■□□□□ 0.14
TMEM258-208ENST00000545210 CNTNAP4Q9C0A0 1308 aa15.93■□□□□ 0.14
TMEM258-208ENST00000545210 RPS6KA4O75676 772 aa15.92■□□□□ 0.14
TMEM258-208ENST00000545210 TNNT2P45379 298 aaPredicted RBP15.92■□□□□ 0.14
TMEM258-208ENST00000545210 PLEKHG2Q9H7P9 1386 aa15.91■□□□□ 0.14
TMEM258-208ENST00000545210 SCN11AQ9UI33 1791 aa15.91■□□□□ 0.14
TMEM258-208ENST00000545210 DCAF5Q96JK2 942 aa15.91■□□□□ 0.14
TMEM258-208ENST00000545210 PIM2Q9P1W9 311 aa15.91■□□□□ 0.14
TMEM258-208ENST00000545210 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
TMEM258-208ENST00000545210 KDM6AO15550 1401 aaPredicted RBP15.91■□□□□ 0.14
TMEM258-208ENST00000545210 AFDNP55196 1824 aaKnown RBP15.91■□□□□ 0.14
TMEM258-208ENST00000545210 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
TMEM258-208ENST00000545210 HSP90AB1P08238 724 aaKnown RBP15.89■□□□□ 0.13
TMEM258-208ENST00000545210 CABP4P57796 275 aa15.89■□□□□ 0.13
TMEM258-208ENST00000545210 KLRG1Q96E93 195 aa15.89■□□□□ 0.13
TMEM258-208ENST00000545210 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
TMEM258-208ENST00000545210 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
TMEM258-208ENST00000545210 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
TMEM258-208ENST00000545210 FSTL1Q12841 308 aa15.88■□□□□ 0.13
TMEM258-208ENST00000545210 DALRD3Q5D0E6 543 aaKnown RBP15.88■□□□□ 0.13
TMEM258-208ENST00000545210 COL13A1Q5TAT6 717 aaPredicted RBP15.88■□□□□ 0.13
TMEM258-208ENST00000545210 ZNF530Q6P9A1 599 aaPredicted RBP15.88■□□□□ 0.13
TMEM258-208ENST00000545210 RNF181Q9P0P0 153 aa15.88■□□□□ 0.13
TMEM258-208ENST00000545210 CHRNA5P30532 468 aa15.87■□□□□ 0.13
TMEM258-208ENST00000545210 CRKLP46109 303 aaKnown RBP15.87■□□□□ 0.13
TMEM258-208ENST00000545210 DDR1Q08345 913 aa15.87■□□□□ 0.13
TMEM258-208ENST00000545210 FKBP8Q14318 412 aa15.87■□□□□ 0.13
TMEM258-208ENST00000545210 PLEKHO1Q53GL0 409 aaPredicted RBP15.87■□□□□ 0.13
TMEM258-208ENST00000545210 JMYQ8N9B5 988 aa15.87■□□□□ 0.13
TMEM258-208ENST00000545210 RRAGCQ9HB90 399 aa15.87■□□□□ 0.13
TMEM258-208ENST00000545210 TIAM2Q8IVF5 1701 aa15.87■□□□□ 0.13
TMEM258-208ENST00000545210 USP42Q9H9J4 1324 aaKnown RBP15.87■□□□□ 0.13
TMEM258-208ENST00000545210 MTHFSP49914 203 aa15.85■□□□□ 0.13
TMEM258-208ENST00000545210 NFATC2IPQ8NCF5 419 aa15.85■□□□□ 0.13
TMEM258-208ENST00000545210 CAPN15O75808 1086 aa15.84■□□□□ 0.13
TMEM258-208ENST00000545210 AMOTQ4VCS5 1084 aa15.84■□□□□ 0.13
TMEM258-208ENST00000545210 POLR3GLQ9BT43 218 aa15.84■□□□□ 0.13
TMEM258-208ENST00000545210 NRXN2Q9P2S2 1712 aa15.84■□□□□ 0.13
TMEM258-208ENST00000545210 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
TMEM258-208ENST00000545210 POLRMTO00411 1230 aaKnown RBP15.82■□□□□ 0.12
TMEM258-208ENST00000545210 AEBP1Q8IUX7 1158 aa15.82■□□□□ 0.12
TMEM258-208ENST00000545210 TM4SF1P30408 202 aa15.81■□□□□ 0.12
TMEM258-208ENST00000545210 RASSF7Q02833 373 aa15.81■□□□□ 0.12
TMEM258-208ENST00000545210 INTS5Q6P9B9 1019 aaKnown RBP15.81■□□□□ 0.12
TMEM258-208ENST00000545210 SMC1BQ8NDV3 1235 aa15.81■□□□□ 0.12
TMEM258-208ENST00000545210 ZPR1O75312 459 aa15.8■□□□□ 0.12
TMEM258-208ENST00000545210 USPL1Q5W0Q7 1092 aa15.8■□□□□ 0.12
TMEM258-208ENST00000545210 TNS4Q8IZW8 715 aa15.8■□□□□ 0.12
TMEM258-208ENST00000545210 DICER1Q9UPY3 1922 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms