RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 BRINP3Q76B58 766 aa23.38■■□□□ 1.33
LYSMD4-210ENST00000545021 SYAP1Q96A49 352 aaPredicted RBP23.38■■□□□ 1.33
LYSMD4-210ENST00000545021 TMEM57Q8N5G2 664 aa23.38■■□□□ 1.33
LYSMD4-210ENST00000545021 CFAP44Q96MT7 982 aa23.37■■□□□ 1.33
LYSMD4-210ENST00000545021 ANKARQ7Z5J8 1434 aa23.37■■□□□ 1.33
LYSMD4-210ENST00000545021 GCC1Q96CN9 775 aa23.37■■□□□ 1.33
LYSMD4-210ENST00000545021 CARD14Q9BXL6 1004 aa23.37■■□□□ 1.33
LYSMD4-210ENST00000545021 CCDC66A2RUB6 948 aa23.36■■□□□ 1.33
LYSMD4-210ENST00000545021 RIOK3O14730 519 aaKnown RBP23.36■■□□□ 1.33
LYSMD4-210ENST00000545021 PHF14O94880 888 aa23.35■■□□□ 1.33
LYSMD4-210ENST00000545021 TTC12Q9H892 705 aaPredicted RBP23.35■■□□□ 1.33
LYSMD4-210ENST00000545021 SSH1Q8WYL5 1049 aa23.35■■□□□ 1.33
LYSMD4-210ENST00000545021 COL22A1Q8NFW1 1626 aaPredicted RBP23.35■■□□□ 1.33
LYSMD4-210ENST00000545021 SYCP1Q15431 976 aa23.34■■□□□ 1.33
LYSMD4-210ENST00000545021 C17orf53Q8N3J3 647 aaPredicted RBP23.34■■□□□ 1.33
LYSMD4-210ENST00000545021 SLFN14P0C7P3 912 aa23.34■■□□□ 1.33
LYSMD4-210ENST00000545021 ZGPATQ8N5A5 531 aaKnown RBP23.33■■□□□ 1.33
LYSMD4-210ENST00000545021 DNAJC2Q99543 621 aaKnown RBP23.33■■□□□ 1.33
LYSMD4-210ENST00000545021 KCNJ4P48050 445 aa23.32■■□□□ 1.32
LYSMD4-210ENST00000545021 ANKRD45Q5TZF3 282 aa23.32■■□□□ 1.32
LYSMD4-210ENST00000545021 TMEM132EQ6IEE7 984 aa23.32■■□□□ 1.32
LYSMD4-210ENST00000545021 NOB1Q9ULX3 412 aaKnown RBP23.32■■□□□ 1.32
LYSMD4-210ENST00000545021 SPATA31A6Q5VVP1 1343 aa23.32■■□□□ 1.32
LYSMD4-210ENST00000545021 PLCD3Q8N3E9 789 aa23.32■■□□□ 1.32
LYSMD4-210ENST00000545021 ST18O60284 1047 aa23.31■■□□□ 1.32
LYSMD4-210ENST00000545021 ANKRD36BQ8N2N9 1353 aa23.31■■□□□ 1.32
LYSMD4-210ENST00000545021 CTNNA3Q9UI47 895 aa23.31■■□□□ 1.32
LYSMD4-210ENST00000545021 KIAA1524Q8TCG1 905 aa23.3■■□□□ 1.32
LYSMD4-210ENST00000545021 ADCY5O95622 1261 aa23.3■■□□□ 1.32
LYSMD4-210ENST00000545021 USP25Q9UHP3 1055 aa23.3■■□□□ 1.32
LYSMD4-210ENST00000545021 IPO8O15397 1037 aaKnown RBP23.29■■□□□ 1.32
LYSMD4-210ENST00000545021 EXOSC9Q06265 439 aaKnown RBP23.29■■□□□ 1.32
LYSMD4-210ENST00000545021 USP32Q8NFA0 1604 aa23.29■■□□□ 1.32
LYSMD4-210ENST00000545021 TIGD1Q96MW7 591 aa23.29■■□□□ 1.32
LYSMD4-210ENST00000545021 USP26Q9BXU7 913 aa23.29■■□□□ 1.32
LYSMD4-210ENST00000545021 DDX41Q9UJV9 622 aaKnown RBP23.29■■□□□ 1.32
LYSMD4-210ENST00000545021 PPIP5K1Q6PFW1 1433 aa23.28■■□□□ 1.32
LYSMD4-210ENST00000545021 ITSN1Q15811 1721 aa23.28■■□□□ 1.32
LYSMD4-210ENST00000545021 NCBP1Q09161 790 aaKnown RBP23.28■■□□□ 1.32
LYSMD4-210ENST00000545021 MPNDQ8N594 471 aa23.28■■□□□ 1.32
LYSMD4-210ENST00000545021 TSR2Q969E8 191 aaKnown RBP23.28■■□□□ 1.32
LYSMD4-210ENST00000545021 STK26Q9P289 416 aa23.28■■□□□ 1.32
LYSMD4-210ENST00000545021 TULP4Q9NRJ4 1543 aa23.28■■□□□ 1.32
LYSMD4-210ENST00000545021 CHAMP1Q96JM3 812 aa23.27■■□□□ 1.32
LYSMD4-210ENST00000545021 PXDNQ92626 1479 aa23.27■■□□□ 1.32
LYSMD4-210ENST00000545021 SOS2Q07890 1332 aaPredicted RBP23.27■■□□□ 1.32
LYSMD4-210ENST00000545021 TPM3P06753 285 aa23.27■■□□□ 1.31
LYSMD4-210ENST00000545021 MORC2Q9Y6X9 1032 aaPredicted RBP23.27■■□□□ 1.31
LYSMD4-210ENST00000545021 WAPLQ7Z5K2 1190 aa23.26■■□□□ 1.31
LYSMD4-210ENST00000545021 TERF2Q15554 542 aa23.25■■□□□ 1.31
LYSMD4-210ENST00000545021 MORC1Q86VD1 984 aa23.24■■□□□ 1.31
LYSMD4-210ENST00000545021 BRD1O95696 1058 aa23.24■■□□□ 1.31
LYSMD4-210ENST00000545021 TULP2O00295 520 aa23.23■■□□□ 1.31
LYSMD4-210ENST00000545021 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
LYSMD4-210ENST00000545021 TOPAZ1Q8N9V7 1692 aa23.23■■□□□ 1.31
LYSMD4-210ENST00000545021 GSPT1P15170 499 aaKnown RBP23.23■■□□□ 1.31
LYSMD4-210ENST00000545021 FAM193AP78312 1265 aa23.22■■□□□ 1.31
LYSMD4-210ENST00000545021 CALCOCO1Q9P1Z2 691 aa23.22■■□□□ 1.31
LYSMD4-210ENST00000545021 PNPLA6Q8IY17 1366 aa23.22■■□□□ 1.31
LYSMD4-210ENST00000545021 LRRC59Q96AG4 307 aaKnown RBP23.21■■□□□ 1.31
LYSMD4-210ENST00000545021 CFAP53Q96M91 514 aa23.21■■□□□ 1.31
LYSMD4-210ENST00000545021 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
LYSMD4-210ENST00000545021 KDM4AO75164 1064 aa23.2■■□□□ 1.3
LYSMD4-210ENST00000545021 RGPD8O14715 1765 aaPredicted RBP23.2■■□□□ 1.3
LYSMD4-210ENST00000545021 PYCARDQ9ULZ3 195 aa23.2■■□□□ 1.3
LYSMD4-210ENST00000545021 IL16Q14005 1332 aa23.19■■□□□ 1.3
LYSMD4-210ENST00000545021 INTS3Q68E01 1043 aaKnown RBP23.19■■□□□ 1.3
LYSMD4-210ENST00000545021 TSPYL1Q9H0U9 437 aa23.19■■□□□ 1.3
LYSMD4-210ENST00000545021 KCNF1Q9H3M0 494 aa23.19■■□□□ 1.3
LYSMD4-210ENST00000545021 LRP6O75581 1613 aa23.19■■□□□ 1.3
LYSMD4-210ENST00000545021 KLHL34Q8N239 644 aa23.19■■□□□ 1.3
LYSMD4-210ENST00000545021 QRICH2Q9H0J4 1663 aa23.18■■□□□ 1.3
LYSMD4-210ENST00000545021 ALDH1L2Q3SY69 923 aa23.18■■□□□ 1.3
LYSMD4-210ENST00000545021 PAXIP1Q6ZW49 1069 aaPredicted RBP23.18■■□□□ 1.3
LYSMD4-210ENST00000545021 CREBRFQ8IUR6 639 aa23.18■■□□□ 1.3
LYSMD4-210ENST00000545021 KIF18AQ8NI77 898 aa23.18■■□□□ 1.3
LYSMD4-210ENST00000545021 NSD3Q9BZ95 1437 aa23.17■■□□□ 1.3
LYSMD4-210ENST00000545021 KRT222Q8N1A0 295 aa23.17■■□□□ 1.3
LYSMD4-210ENST00000545021 ZBTB7BO15156 539 aaPredicted RBP23.17■■□□□ 1.3
LYSMD4-210ENST00000545021 TRPM3Q9HCF6 1732 aaPredicted RBP23.16■■□□□ 1.3
LYSMD4-210ENST00000545021 SMTNL1A8MU46 457 aa23.16■■□□□ 1.3
LYSMD4-210ENST00000545021 CCDC183Q5T5S1 534 aa23.16■■□□□ 1.3
LYSMD4-210ENST00000545021 FOXD4L5Q5VV16 416 aaPredicted RBP23.16■■□□□ 1.3
LYSMD4-210ENST00000545021 FOXD4L4Q8WXT5 416 aaPredicted RBP23.16■■□□□ 1.3
LYSMD4-210ENST00000545021 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
LYSMD4-210ENST00000545021 MARF1Q9Y4F3 1742 aaKnown RBP23.15■■□□□ 1.3
LYSMD4-210ENST00000545021 SBNO1A3KN83 1393 aa23.15■■□□□ 1.3
LYSMD4-210ENST00000545021 MTHFSP49914 203 aa23.15■■□□□ 1.3
LYSMD4-210ENST00000545021 TTC22Q5TAA0 569 aa23.15■■□□□ 1.3
LYSMD4-210ENST00000545021 PLEKHM2Q8IWE5 1019 aa23.15■■□□□ 1.3
LYSMD4-210ENST00000545021 TRAK1Q9UPV9 953 aa23.15■■□□□ 1.3
LYSMD4-210ENST00000545021 CAPN2P17655 700 aa23.14■■□□□ 1.3
LYSMD4-210ENST00000545021 BRPF1P55201 1214 aaPredicted RBP23.14■■□□□ 1.29
LYSMD4-210ENST00000545021 GOLGA6L6A8MZA4 724 aa23.13■■□□□ 1.29
LYSMD4-210ENST00000545021 HCLS1P14317 486 aaPredicted RBP23.13■■□□□ 1.29
LYSMD4-210ENST00000545021 ATP7BP35670 1465 aa23.13■■□□□ 1.29
LYSMD4-210ENST00000545021 IRX3P78415 501 aaPredicted RBP23.13■■□□□ 1.29
LYSMD4-210ENST00000545021 WASLO00401 505 aaPredicted RBP23.12■■□□□ 1.29
LYSMD4-210ENST00000545021 SIRT2Q8IXJ6 389 aa23.12■■□□□ 1.29
LYSMD4-210ENST00000545021 GADD45BO75293 160 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms