RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 KLHL34Q8N239 644 aa25.35■■□□□ 1.65
TDG-208ENST00000544060 HMOX1P09601 288 aa25.34■■□□□ 1.65
TDG-208ENST00000544060 ATP6V1AP38606 617 aa25.34■■□□□ 1.65
TDG-208ENST00000544060 MAP3K5Q99683 1374 aa25.32■■□□□ 1.64
TDG-208ENST00000544060 LINC00116Q8NCU8 138 aa25.32■■□□□ 1.64
TDG-208ENST00000544060 PHF14O94880 888 aa25.31■■□□□ 1.64
TDG-208ENST00000544060 MSL1Q68DK7 614 aa25.31■■□□□ 1.64
TDG-208ENST00000544060 UBR3Q6ZT12 1888 aa25.31■■□□□ 1.64
TDG-208ENST00000544060 ITPK1Q13572 414 aa25.3■■□□□ 1.64
TDG-208ENST00000544060 RBM42Q9BTD8 480 aaKnown RBP25.3■■□□□ 1.64
TDG-208ENST00000544060 AKAP4Q5JQC9 854 aa25.29■■□□□ 1.64
TDG-208ENST00000544060 COL3A1P02461 1466 aaPredicted RBP25.28■■□□□ 1.64
TDG-208ENST00000544060 SCN11AQ9UI33 1791 aa25.28■■□□□ 1.64
TDG-208ENST00000544060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.27■■□□□ 1.64
TDG-208ENST00000544060 U2SURPO15042 1029 aaKnown RBP25.27■■□□□ 1.64
TDG-208ENST00000544060 GNPATO15228 680 aa25.27■■□□□ 1.64
TDG-208ENST00000544060 SSFA2P28290 1259 aa25.27■■□□□ 1.64
TDG-208ENST00000544060 NFATC2IPQ8NCF5 419 aa25.27■■□□□ 1.64
TDG-208ENST00000544060 ZNF831Q5JPB2 1677 aa25.26■■□□□ 1.63
TDG-208ENST00000544060 AMIGO3Q86WK7 504 aa25.26■■□□□ 1.63
TDG-208ENST00000544060 CFAP53Q96M91 514 aa25.26■■□□□ 1.63
TDG-208ENST00000544060 YY1P25490 414 aa25.25■■□□□ 1.63
TDG-208ENST00000544060 SMIM5Q71RC9 77 aa25.24■■□□□ 1.63
TDG-208ENST00000544060 SLC4A9Q96Q91 983 aa25.23■■□□□ 1.63
TDG-208ENST00000544060 PTCD1O75127 700 aaKnown RBP25.22■■□□□ 1.63
TDG-208ENST00000544060 MTHFSDQ2M296 383 aaKnown RBP25.22■■□□□ 1.63
TDG-208ENST00000544060 COL5A3P25940 1745 aaPredicted RBP25.22■■□□□ 1.63
TDG-208ENST00000544060 RTCBQ9Y3I0 505 aaKnown RBP25.21■■□□□ 1.63
TDG-208ENST00000544060 VIRMAQ69YN4 1812 aaKnown RBP25.21■■□□□ 1.63
TDG-208ENST00000544060 RNMTO43148 476 aaKnown RBP25.2■■□□□ 1.62
TDG-208ENST00000544060 SLC52A2Q9HAB3 445 aa25.2■■□□□ 1.62
TDG-208ENST00000544060 LGR6Q9HBX8 967 aa25.2■■□□□ 1.62
TDG-208ENST00000544060 GPR162Q16538 588 aa25.19■■□□□ 1.62
TDG-208ENST00000544060 CNTNAP4Q9C0A0 1308 aa25.18■■□□□ 1.62
TDG-208ENST00000544060 MRC1P22897 1456 aa25.18■■□□□ 1.62
TDG-208ENST00000544060 PPP2R1AP30153 589 aa25.18■■□□□ 1.62
TDG-208ENST00000544060 RC3H1Q5TC82 1133 aaKnown RBP25.18■■□□□ 1.62
TDG-208ENST00000544060 PELP1Q8IZL8 1130 aaKnown RBP25.18■■□□□ 1.62
TDG-208ENST00000544060 NLGN2Q8NFZ4 835 aa25.18■■□□□ 1.62
TDG-208ENST00000544060 TRAPPC3LQ5T215 181 aa25.17■■□□□ 1.62
TDG-208ENST00000544060 NUDCQ9Y266 331 aa25.17■■□□□ 1.62
TDG-208ENST00000544060 GAS2L2Q8NHY3 880 aa25.16■■□□□ 1.62
TDG-208ENST00000544060 ADAMTS7Q9UKP4 1686 aa25.15■■□□□ 1.62
TDG-208ENST00000544060 TJP1Q07157 1748 aa25.15■■□□□ 1.62
TDG-208ENST00000544060 ADRA2BP18089 450 aa25.14■■□□□ 1.62
TDG-208ENST00000544060 CICQ96RK0 1608 aaPredicted RBP25.13■■□□□ 1.61
TDG-208ENST00000544060 RPS6KA4O75676 772 aa25.13■■□□□ 1.61
TDG-208ENST00000544060 CD2APQ9Y5K6 639 aa25.13■■□□□ 1.61
TDG-208ENST00000544060 CRKLP46109 303 aaKnown RBP25.12■■□□□ 1.61
TDG-208ENST00000544060 GNAT3A8MTJ3 354 aa25.11■■□□□ 1.61
TDG-208ENST00000544060 PRKAR2BP31323 418 aa25.11■■□□□ 1.61
TDG-208ENST00000544060 RFC4P35249 363 aa25.11■■□□□ 1.61
TDG-208ENST00000544060 SLC39A6Q13433 755 aa25.11■■□□□ 1.61
TDG-208ENST00000544060 ARHGEF1Q92888 912 aaKnown RBP25.11■■□□□ 1.61
TDG-208ENST00000544060 U2AF1L5P0DN76 240 aaPredicted RBP25.1■■□□□ 1.61
TDG-208ENST00000544060 U2AF1Q01081 240 aaKnown RBP eCLIP25.1■■□□□ 1.61
TDG-208ENST00000544060 RSPH6AQ9H0K4 717 aa25.1■■□□□ 1.61
TDG-208ENST00000544060 MYH14Q7Z406 1995 aaKnown RBP25.1■■□□□ 1.61
TDG-208ENST00000544060 TEFQ10587 303 aa25.09■■□□□ 1.61
TDG-208ENST00000544060 CHD4Q14839 1912 aa25.09■■□□□ 1.61
TDG-208ENST00000544060 MMP10P09238 476 aa25.08■■□□□ 1.61
TDG-208ENST00000544060 NLGN1Q8N2Q7 840 aa25.08■■□□□ 1.61
TDG-208ENST00000544060 C4AP0C0L4 1744 aa25.08■■□□□ 1.61
TDG-208ENST00000544060 KCPQ6ZWJ8 1503 aa25.07■■□□□ 1.6
TDG-208ENST00000544060 DNAJC10Q8IXB1 793 aa25.07■■□□□ 1.6
TDG-208ENST00000544060 TTC5Q8N0Z6 440 aa25.07■■□□□ 1.6
TDG-208ENST00000544060 UTRNP46939 3433 aa25.06■■□□□ 1.6
TDG-208ENST00000544060 PHACTR3Q96KR7 559 aa25.06■■□□□ 1.6
TDG-208ENST00000544060 CCDC87Q9NVE4 849 aa25.05■■□□□ 1.6
TDG-208ENST00000544060 UBR2Q8IWV8 1755 aa25.04■■□□□ 1.6
TDG-208ENST00000544060 IL17REQ8NFR9 667 aa25.04■■□□□ 1.6
TDG-208ENST00000544060 GRIN3BO60391 1043 aa25.03■■□□□ 1.6
TDG-208ENST00000544060 FCHSD2O94868 740 aa25.03■■□□□ 1.6
TDG-208ENST00000544060 GYS1P13807 737 aa25.03■■□□□ 1.6
TDG-208ENST00000544060 INTS5Q6P9B9 1019 aaKnown RBP25.03■■□□□ 1.6
TDG-208ENST00000544060 GOLGB1Q14789 3259 aaKnown RBP25.03■■□□□ 1.6
TDG-208ENST00000544060 YBX3P16989 372 aaKnown RBP eCLIP25.02■■□□□ 1.6
TDG-208ENST00000544060 VSIG10Q8N0Z9 540 aa25.02■■□□□ 1.6
TDG-208ENST00000544060 SIPA1L3O60292 1781 aaPredicted RBP25.02■■□□□ 1.6
TDG-208ENST00000544060 CYP19A1P11511 503 aaPredicted RBP25.01■■□□□ 1.59
TDG-208ENST00000544060 SRP68Q9UHB9 627 aaKnown RBP25■■□□□ 1.59
TDG-208ENST00000544060 PARP3Q9Y6F1 533 aa25■■□□□ 1.59
TDG-208ENST00000544060 USP42Q9H9J4 1324 aaKnown RBP25■■□□□ 1.59
TDG-208ENST00000544060 ZNF790Q6PG37 636 aa24.99■■□□□ 1.59
TDG-208ENST00000544060 CEMIPQ8WUJ3 1361 aa24.99■■□□□ 1.59
TDG-208ENST00000544060 RTF1Q92541 710 aaKnown RBP24.99■■□□□ 1.59
TDG-208ENST00000544060 SOS1Q07889 1333 aaPredicted RBP24.98■■□□□ 1.59
TDG-208ENST00000544060 NEFMP07197 916 aa24.98■■□□□ 1.59
TDG-208ENST00000544060 ZPR1O75312 459 aa24.97■■□□□ 1.59
TDG-208ENST00000544060 STARD3NLO95772 234 aa24.97■■□□□ 1.59
TDG-208ENST00000544060 ZNF784Q8NCA9 323 aaPredicted RBP24.96■■□□□ 1.59
TDG-208ENST00000544060 ZNF496Q96IT1 587 aaPredicted RBP24.96■■□□□ 1.59
TDG-208ENST00000544060 WWC3Q9ULE0 1092 aa24.96■■□□□ 1.59
TDG-208ENST00000544060 ZBTB1Q9Y2K1 713 aa24.96■■□□□ 1.59
TDG-208ENST00000544060 KIF13BQ9NQT8 1826 aa24.96■■□□□ 1.59
TDG-208ENST00000544060 C10orf71Q711Q0 1435 aa24.95■■□□□ 1.59
TDG-208ENST00000544060 COL15A1P39059 1388 aa24.95■■□□□ 1.59
TDG-208ENST00000544060 HEG1Q9ULI3 1381 aa24.95■■□□□ 1.59
TDG-208ENST00000544060 BTBD11A6QL63 1104 aa24.95■■□□□ 1.58
TDG-208ENST00000544060 FKBP8Q14318 412 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms