RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 PPM1GO15355 546 aaPredicted RBP25.5■■□□□ 1.67
RAP1B-229ENST00000543393 TGFB2P61812 414 aa25.5■■□□□ 1.67
RAP1B-229ENST00000543393 A0A0G2JLW4 131 aa25.49■■□□□ 1.67
RAP1B-229ENST00000543393 ATG3Q9NT62 314 aa25.49■■□□□ 1.67
RAP1B-229ENST00000543393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.49■■□□□ 1.67
RAP1B-229ENST00000543393 ANKRD26Q9UPS8 1709 aa25.47■■□□□ 1.67
RAP1B-229ENST00000543393 PHKG2P15735 406 aa25.47■■□□□ 1.67
RAP1B-229ENST00000543393 ARHGAP27Q6ZUM4 889 aa25.47■■□□□ 1.67
RAP1B-229ENST00000543393 IFNL2Q8IZJ0 200 aa25.47■■□□□ 1.67
RAP1B-229ENST00000543393 EYA1Q99502 592 aa25.47■■□□□ 1.67
RAP1B-229ENST00000543393 CARD14Q9BXL6 1004 aa25.47■■□□□ 1.67
RAP1B-229ENST00000543393 NMRK2Q9NPI5 230 aa25.47■■□□□ 1.67
RAP1B-229ENST00000543393 C10orf71Q711Q0 1435 aa25.46■■□□□ 1.67
RAP1B-229ENST00000543393 TRAPPC3LQ5T215 181 aa25.46■■□□□ 1.67
RAP1B-229ENST00000543393 NLGN1Q8N2Q7 840 aa25.46■■□□□ 1.67
RAP1B-229ENST00000543393 RTCBQ9Y3I0 505 aaKnown RBP25.46■■□□□ 1.67
RAP1B-229ENST00000543393 WASHC2AQ641Q2 1341 aa25.44■■□□□ 1.66
RAP1B-229ENST00000543393 BRCA1P38398 1863 aaKnown RBP25.44■■□□□ 1.66
RAP1B-229ENST00000543393 KDRP35968 1356 aa25.44■■□□□ 1.66
RAP1B-229ENST00000543393 DPEP1P16444 411 aa25.43■■□□□ 1.66
RAP1B-229ENST00000543393 CDCA8Q53HL2 280 aa25.43■■□□□ 1.66
RAP1B-229ENST00000543393 WDR90Q96KV7 1748 aa25.43■■□□□ 1.66
RAP1B-229ENST00000543393 FCHSD2O94868 740 aa25.42■■□□□ 1.66
RAP1B-229ENST00000543393 ARHGEF1Q92888 912 aaKnown RBP25.42■■□□□ 1.66
RAP1B-229ENST00000543393 SLC4A9Q96Q91 983 aa25.42■■□□□ 1.66
RAP1B-229ENST00000543393 CCDC87Q9NVE4 849 aa25.42■■□□□ 1.66
RAP1B-229ENST00000543393 C4AP0C0L4 1744 aa25.42■■□□□ 1.66
RAP1B-229ENST00000543393 ZNF831Q5JPB2 1677 aa25.4■■□□□ 1.66
RAP1B-229ENST00000543393 GYS1P13807 737 aa25.39■■□□□ 1.66
RAP1B-229ENST00000543393 ADRA2BP18089 450 aa25.39■■□□□ 1.66
RAP1B-229ENST00000543393 RBM46Q8TBY0 533 aaKnown RBP25.39■■□□□ 1.66
RAP1B-229ENST00000543393 RBM42Q9BTD8 480 aaKnown RBP25.39■■□□□ 1.66
RAP1B-229ENST00000543393 COL5A3P25940 1745 aaPredicted RBP25.39■■□□□ 1.65
RAP1B-229ENST00000543393 RC3H1Q5TC82 1133 aaKnown RBP25.38■■□□□ 1.65
RAP1B-229ENST00000543393 C9orf131Q5VYM1 1079 aa25.38■■□□□ 1.65
RAP1B-229ENST00000543393 PARP3Q9Y6F1 533 aa25.38■■□□□ 1.65
RAP1B-229ENST00000543393 ARFGEF1Q9Y6D6 1849 aa25.37■■□□□ 1.65
RAP1B-229ENST00000543393 KCNA3P22001 575 aa25.37■■□□□ 1.65
RAP1B-229ENST00000543393 RFC4P35249 363 aa25.37■■□□□ 1.65
RAP1B-229ENST00000543393 C16orf71Q8IYS4 520 aaPredicted RBP25.37■■□□□ 1.65
RAP1B-229ENST00000543393 CNTNAP4Q9C0A0 1308 aa25.37■■□□□ 1.65
RAP1B-229ENST00000543393 HTRA3P83110 453 aa25.36■■□□□ 1.65
RAP1B-229ENST00000543393 POLKQ9UBT6 870 aa25.36■■□□□ 1.65
RAP1B-229ENST00000543393 PLEKHG2Q9H7P9 1386 aa25.35■■□□□ 1.65
RAP1B-229ENST00000543393 MYH14Q7Z406 1995 aaKnown RBP25.35■■□□□ 1.65
RAP1B-229ENST00000543393 RPS6KA4O75676 772 aa25.35■■□□□ 1.65
RAP1B-229ENST00000543393 ERVV-2B6SEH9 535 aa25.34■■□□□ 1.65
RAP1B-229ENST00000543393 KLRG1Q96E93 195 aa25.34■■□□□ 1.65
RAP1B-229ENST00000543393 EIF4A2Q14240 407 aaKnown RBP25.33■■□□□ 1.65
RAP1B-229ENST00000543393 PIM2Q9P1W9 311 aa25.32■■□□□ 1.64
RAP1B-229ENST00000543393 KCPQ6ZWJ8 1503 aa25.32■■□□□ 1.64
RAP1B-229ENST00000543393 FSTL1Q12841 308 aa25.31■■□□□ 1.64
RAP1B-229ENST00000543393 COL13A1Q5TAT6 717 aaPredicted RBP25.31■■□□□ 1.64
RAP1B-229ENST00000543393 JMYQ8N9B5 988 aa25.31■■□□□ 1.64
RAP1B-229ENST00000543393 DCAF5Q96JK2 942 aa25.31■■□□□ 1.64
RAP1B-229ENST00000543393 KDM2BQ8NHM5 1336 aa25.3■■□□□ 1.64
RAP1B-229ENST00000543393 HSP90AB1P08238 724 aaKnown RBP25.29■■□□□ 1.64
RAP1B-229ENST00000543393 DALRD3Q5D0E6 543 aaKnown RBP25.29■■□□□ 1.64
RAP1B-229ENST00000543393 RNF181Q9P0P0 153 aa25.28■■□□□ 1.64
RAP1B-229ENST00000543393 KDM6AO15550 1401 aaPredicted RBP25.28■■□□□ 1.64
RAP1B-229ENST00000543393 CABP4P57796 275 aa25.27■■□□□ 1.64
RAP1B-229ENST00000543393 RRAGCQ9HB90 399 aa25.27■■□□□ 1.64
RAP1B-229ENST00000543393 SBF1O95248 1867 aa25.26■■□□□ 1.63
RAP1B-229ENST00000543393 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
RAP1B-229ENST00000543393 FKBP8Q14318 412 aa25.26■■□□□ 1.63
RAP1B-229ENST00000543393 SRP68Q9UHB9 627 aaKnown RBP25.26■■□□□ 1.63
RAP1B-229ENST00000543393 PTCD1O75127 700 aaKnown RBP25.25■■□□□ 1.63
RAP1B-229ENST00000543393 CRKLP46109 303 aaKnown RBP25.25■■□□□ 1.63
RAP1B-229ENST00000543393 DDR1Q08345 913 aa25.25■■□□□ 1.63
RAP1B-229ENST00000543393 PLEKHO1Q53GL0 409 aaPredicted RBP25.25■■□□□ 1.63
RAP1B-229ENST00000543393 TNRC6CQ9HCJ0 1690 aaKnown RBP25.25■■□□□ 1.63
RAP1B-229ENST00000543393 PCNTO95613 3336 aa25.24■■□□□ 1.63
RAP1B-229ENST00000543393 USP42Q9H9J4 1324 aaKnown RBP25.24■■□□□ 1.63
RAP1B-229ENST00000543393 CHRNA5P30532 468 aa25.24■■□□□ 1.63
RAP1B-229ENST00000543393 ZNF530Q6P9A1 599 aaPredicted RBP25.24■■□□□ 1.63
RAP1B-229ENST00000543393 CAPN15O75808 1086 aa25.21■■□□□ 1.63
RAP1B-229ENST00000543393 MTHFSP49914 203 aa25.21■■□□□ 1.63
RAP1B-229ENST00000543393 AMOTQ4VCS5 1084 aa25.2■■□□□ 1.62
RAP1B-229ENST00000543393 SMC1BQ8NDV3 1235 aa25.2■■□□□ 1.62
RAP1B-229ENST00000543393 TJP1Q07157 1748 aa25.2■■□□□ 1.62
RAP1B-229ENST00000543393 POLRMTO00411 1230 aaKnown RBP25.19■■□□□ 1.62
RAP1B-229ENST00000543393 NFATC2IPQ8NCF5 419 aa25.19■■□□□ 1.62
RAP1B-229ENST00000543393 TNS4Q8IZW8 715 aa25.18■■□□□ 1.62
RAP1B-229ENST00000543393 ADAMTS7Q9UKP4 1686 aa25.17■■□□□ 1.62
RAP1B-229ENST00000543393 TM4SF1P30408 202 aa25.17■■□□□ 1.62
RAP1B-229ENST00000543393 C1orf141Q5JVX7 400 aa25.16■■□□□ 1.62
RAP1B-229ENST00000543393 INTS5Q6P9B9 1019 aaKnown RBP25.16■■□□□ 1.62
RAP1B-229ENST00000543393 RASSF7Q02833 373 aa25.15■■□□□ 1.62
RAP1B-229ENST00000543393 AEBP1Q8IUX7 1158 aa25.15■■□□□ 1.62
RAP1B-229ENST00000543393 POLR3GLQ9BT43 218 aa25.14■■□□□ 1.62
RAP1B-229ENST00000543393 ZC3H4Q9UPT8 1303 aaKnown RBP25.13■■□□□ 1.61
RAP1B-229ENST00000543393 ZPR1O75312 459 aa25.13■■□□□ 1.61
RAP1B-229ENST00000543393 USPL1Q5W0Q7 1092 aa25.13■■□□□ 1.61
RAP1B-229ENST00000543393 AFDNP55196 1824 aaKnown RBP25.12■■□□□ 1.61
RAP1B-229ENST00000543393 SCN11AQ9UI33 1791 aa25.11■■□□□ 1.61
RAP1B-229ENST00000543393 PRELPP51888 382 aa25.11■■□□□ 1.61
RAP1B-229ENST00000543393 GLTPD2A6NH11 291 aa25.1■■□□□ 1.61
RAP1B-229ENST00000543393 VEGFAP15692 232 aaPredicted RBP25.1■■□□□ 1.61
RAP1B-229ENST00000543393 LMNB1P20700 586 aa25.1■■□□□ 1.61
RAP1B-229ENST00000543393 DNAJC10Q8IXB1 793 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms