RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 MCM10Q7L590 875 aa22.57■■□□□ 1.2
RABGGTA-203ENST00000543002 FAM9BQ8IZU0 186 aa22.57■■□□□ 1.2
RABGGTA-203ENST00000543002 SMARCC1Q92922 1105 aaPredicted RBP22.57■■□□□ 1.2
RABGGTA-203ENST00000543002 TEFQ10587 303 aa22.56■■□□□ 1.2
RABGGTA-203ENST00000543002 RRP7AQ9Y3A4 280 aaKnown RBP22.56■■□□□ 1.2
RABGGTA-203ENST00000543002 APAF1O14727 1248 aa22.55■■□□□ 1.2
RABGGTA-203ENST00000543002 DCTN1Q14203 1278 aa22.55■■□□□ 1.2
RABGGTA-203ENST00000543002 TXNRD1Q16881 649 aa22.55■■□□□ 1.2
RABGGTA-203ENST00000543002 PROM2Q8N271 834 aa22.55■■□□□ 1.2
RABGGTA-203ENST00000543002 ATG3Q9NT62 314 aa22.55■■□□□ 1.2
RABGGTA-203ENST00000543002 ASAP1Q9ULH1 1129 aa22.55■■□□□ 1.2
RABGGTA-203ENST00000543002 PALLDQ8WX93 1383 aa22.54■■□□□ 1.2
RABGGTA-203ENST00000543002 LMOD3Q0VAK6 560 aa22.54■■□□□ 1.2
RABGGTA-203ENST00000543002 NEUROD2Q15784 382 aa22.53■■□□□ 1.2
RABGGTA-203ENST00000543002 LY75O60449 1722 aa22.51■■□□□ 1.19
RABGGTA-203ENST00000543002 RREB1Q92766 1687 aa22.51■■□□□ 1.19
RABGGTA-203ENST00000543002 SLC27A3Q5K4L6 730 aa22.51■■□□□ 1.19
RABGGTA-203ENST00000543002 TRIM35Q9UPQ4 493 aa22.5■■□□□ 1.19
RABGGTA-203ENST00000543002 SIPA1L3O60292 1781 aaPredicted RBP22.49■■□□□ 1.19
RABGGTA-203ENST00000543002 THUMPD2Q9BTF0 503 aaKnown RBP22.49■■□□□ 1.19
RABGGTA-203ENST00000543002 LRRC4BQ9NT99 713 aa22.48■■□□□ 1.19
RABGGTA-203ENST00000543002 CCNL1Q9UK58 526 aaPredicted RBP22.48■■□□□ 1.19
RABGGTA-203ENST00000543002 LOC102724428A0A0B4J2F2 783 aa22.47■■□□□ 1.19
RABGGTA-203ENST00000543002 SIK1P57059 783 aa22.47■■□□□ 1.19
RABGGTA-203ENST00000543002 SLC39A6Q13433 755 aa22.47■■□□□ 1.19
RABGGTA-203ENST00000543002 TAF7Q15545 349 aaPredicted RBP22.47■■□□□ 1.19
RABGGTA-203ENST00000543002 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
RABGGTA-203ENST00000543002 NUP188Q5SRE5 1749 aa22.46■■□□□ 1.19
RABGGTA-203ENST00000543002 BTBD11A6QL63 1104 aa22.46■■□□□ 1.19
RABGGTA-203ENST00000543002 KCNQ4P56696 695 aa22.45■■□□□ 1.18
RABGGTA-203ENST00000543002 NCBP3Q53F19 620 aaKnown RBP22.45■■□□□ 1.18
RABGGTA-203ENST00000543002 RBM42Q9BTD8 480 aaKnown RBP22.45■■□□□ 1.18
RABGGTA-203ENST00000543002 PTCD1O75127 700 aaKnown RBP22.44■■□□□ 1.18
RABGGTA-203ENST00000543002 ZNF790Q6PG37 636 aa22.44■■□□□ 1.18
RABGGTA-203ENST00000543002 TTC5Q8N0Z6 440 aa22.43■■□□□ 1.18
RABGGTA-203ENST00000543002 SLC4A9Q96Q91 983 aa22.43■■□□□ 1.18
RABGGTA-203ENST00000543002 HMGB2P26583 209 aaKnown RBP22.42■■□□□ 1.18
RABGGTA-203ENST00000543002 ATP6V1AP38606 617 aa22.42■■□□□ 1.18
RABGGTA-203ENST00000543002 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
RABGGTA-203ENST00000543002 KCPQ6ZWJ8 1503 aa22.41■■□□□ 1.18
RABGGTA-203ENST00000543002 SENP3-EIF4A1A0A087X0R7 540 aa22.41■■□□□ 1.18
RABGGTA-203ENST00000543002 NBPF14Q5TI25 921 aa22.41■■□□□ 1.18
RABGGTA-203ENST00000543002 ZNF831Q5JPB2 1677 aa22.41■■□□□ 1.18
RABGGTA-203ENST00000543002 KCNQ3O43525 872 aa22.4■■□□□ 1.18
RABGGTA-203ENST00000543002 ITPK1Q13572 414 aa22.4■■□□□ 1.18
RABGGTA-203ENST00000543002 NGEFQ8N5V2 710 aa22.4■■□□□ 1.18
RABGGTA-203ENST00000543002 MIS18AQ9NYP9 233 aa22.4■■□□□ 1.18
RABGGTA-203ENST00000543002 UBR2Q8IWV8 1755 aa22.4■■□□□ 1.18
RABGGTA-203ENST00000543002 ZNF496Q96IT1 587 aaPredicted RBP22.39■■□□□ 1.18
RABGGTA-203ENST00000543002 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.18
RABGGTA-203ENST00000543002 BABAM1Q9NWV8 329 aa22.39■■□□□ 1.18
RABGGTA-203ENST00000543002 CALD1Q05682 793 aaKnown RBP22.38■■□□□ 1.17
RABGGTA-203ENST00000543002 WWC1Q8IX03 1113 aa22.38■■□□□ 1.17
RABGGTA-203ENST00000543002 VSIG10Q8N0Z9 540 aa22.38■■□□□ 1.17
RABGGTA-203ENST00000543002 FMNL2Q96PY5 1086 aa22.38■■□□□ 1.17
RABGGTA-203ENST00000543002 STK32BQ9NY57 414 aa22.37■■□□□ 1.17
RABGGTA-203ENST00000543002 C5P01031 1676 aa22.37■■□□□ 1.17
RABGGTA-203ENST00000543002 TAF1LQ8IZX4 1826 aa22.37■■□□□ 1.17
RABGGTA-203ENST00000543002 CHL1O00533 1208 aa22.36■■□□□ 1.17
RABGGTA-203ENST00000543002 SLC15A2Q16348 729 aa22.36■■□□□ 1.17
RABGGTA-203ENST00000543002 LINC00116Q8NCU8 138 aa22.36■■□□□ 1.17
RABGGTA-203ENST00000543002 AKT1S1Q96B36 256 aa22.36■■□□□ 1.17
RABGGTA-203ENST00000543002 TSPYL4Q9UJ04 414 aa22.36■■□□□ 1.17
RABGGTA-203ENST00000543002 SALL2Q9Y467 1007 aaPredicted RBP22.36■■□□□ 1.17
RABGGTA-203ENST00000543002 HEG1Q9ULI3 1381 aa22.36■■□□□ 1.17
RABGGTA-203ENST00000543002 CICQ96RK0 1608 aaPredicted RBP22.36■■□□□ 1.17
RABGGTA-203ENST00000543002 KDM3BQ7LBC6 1761 aa22.35■■□□□ 1.17
RABGGTA-203ENST00000543002 ZNF827Q17R98 1081 aa22.35■■□□□ 1.17
RABGGTA-203ENST00000543002 DNAJC10Q8IXB1 793 aa22.34■■□□□ 1.17
RABGGTA-203ENST00000543002 CFAP44Q96MT7 982 aa22.34■■□□□ 1.17
RABGGTA-203ENST00000543002 ZNF853P0CG23 659 aa22.33■■□□□ 1.17
RABGGTA-203ENST00000543002 IFT57Q9NWB7 429 aa22.33■■□□□ 1.17
RABGGTA-203ENST00000543002 LAS1LQ9Y4W2 734 aaKnown RBP22.33■■□□□ 1.17
RABGGTA-203ENST00000543002 C4BP0C0L5 1744 aa22.33■■□□□ 1.17
RABGGTA-203ENST00000543002 TJP1Q07157 1748 aa22.33■■□□□ 1.17
RABGGTA-203ENST00000543002 EIF4A1P60842 406 aaKnown RBP22.32■■□□□ 1.16
RABGGTA-203ENST00000543002 R3HDM1Q15032 1099 aaKnown RBP22.32■■□□□ 1.16
RABGGTA-203ENST00000543002 TEX13AQ9BXU3 409 aaPredicted RBP22.32■■□□□ 1.16
RABGGTA-203ENST00000543002 CNTNAP4Q9C0A0 1308 aa22.32■■□□□ 1.16
RABGGTA-203ENST00000543002 GNAI1P63096 354 aa22.31■■□□□ 1.16
RABGGTA-203ENST00000543002 RC3H1Q5TC82 1133 aaKnown RBP22.31■■□□□ 1.16
RABGGTA-203ENST00000543002 WDR63Q8IWG1 891 aa22.31■■□□□ 1.16
RABGGTA-203ENST00000543002 COL5A3P25940 1745 aaPredicted RBP22.31■■□□□ 1.16
RABGGTA-203ENST00000543002 IL16Q14005 1332 aa22.31■■□□□ 1.16
RABGGTA-203ENST00000543002 SNRPA1P09661 255 aaKnown RBP22.31■■□□□ 1.16
RABGGTA-203ENST00000543002 CYP19A1P11511 503 aaPredicted RBP22.31■■□□□ 1.16
RABGGTA-203ENST00000543002 AK7Q96M32 723 aa22.31■■□□□ 1.16
RABGGTA-203ENST00000543002 PSDA5PKW4 1024 aaPredicted RBP22.3■■□□□ 1.16
RABGGTA-203ENST00000543002 MBIPQ9NS73 344 aa22.3■■□□□ 1.16
RABGGTA-203ENST00000543002 TFCP2L1Q9NZI6 479 aa22.3■■□□□ 1.16
RABGGTA-203ENST00000543002 STARD3NLO95772 234 aa22.29■■□□□ 1.16
RABGGTA-203ENST00000543002 CRKLP46109 303 aaKnown RBP22.29■■□□□ 1.16
RABGGTA-203ENST00000543002 ZNF521Q96K83 1311 aa22.28■■□□□ 1.16
RABGGTA-203ENST00000543002 GIGYF1O75420 1035 aaPredicted RBP22.28■■□□□ 1.16
RABGGTA-203ENST00000543002 PRAMEF22A3QJZ6 481 aa22.27■■□□□ 1.16
RABGGTA-203ENST00000543002 GNPATO15228 680 aa22.27■■□□□ 1.16
RABGGTA-203ENST00000543002 INTS5Q6P9B9 1019 aaKnown RBP22.27■■□□□ 1.16
RABGGTA-203ENST00000543002 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
RABGGTA-203ENST00000543002 USP16Q9Y5T5 823 aa22.27■■□□□ 1.16
RABGGTA-203ENST00000543002 PNPLA7Q6ZV29 1317 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms