RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 RBM27Q9P2N5 1060 aaKnown RBP13.29□□□□□ -0.28
CALU-206ENST00000542996 GNAI1P63096 354 aa13.29□□□□□ -0.28
CALU-206ENST00000542996 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
CALU-206ENST00000542996 JARID2Q92833 1246 aaPredicted RBP13.28□□□□□ -0.28
CALU-206ENST00000542996 SIRT1Q96EB6 747 aa13.28□□□□□ -0.28
CALU-206ENST00000542996 CACNA1FO60840 1977 aa13.28□□□□□ -0.28
CALU-206ENST00000542996 SOS1Q07889 1333 aaPredicted RBP13.28□□□□□ -0.28
CALU-206ENST00000542996 COL15A1P39059 1388 aa13.27□□□□□ -0.28
CALU-206ENST00000542996 CPA1P15085 419 aa13.27□□□□□ -0.28
CALU-206ENST00000542996 HOXC9P31274 260 aa13.27□□□□□ -0.28
CALU-206ENST00000542996 AAMPQ13685 434 aa13.27□□□□□ -0.29
CALU-206ENST00000542996 LMBRD1Q9NUN5 540 aa13.27□□□□□ -0.29
CALU-206ENST00000542996 DDX17Q92841 729 aaKnown RBP13.26□□□□□ -0.29
CALU-206ENST00000542996 MAP4K4O95819 1239 aaPredicted RBP13.26□□□□□ -0.29
CALU-206ENST00000542996 ADCY9O60503 1353 aa13.26□□□□□ -0.29
CALU-206ENST00000542996 TRPM3Q9HCF6 1732 aaPredicted RBP13.26□□□□□ -0.29
CALU-206ENST00000542996 CLEC17AQ6ZS10 378 aa13.26□□□□□ -0.29
CALU-206ENST00000542996 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
CALU-206ENST00000542996 LMO7Q8WWI1 1683 aa13.26□□□□□ -0.29
CALU-206ENST00000542996 CEMIPQ8WUJ3 1361 aa13.26□□□□□ -0.29
CALU-206ENST00000542996 LARGE1O95461 756 aa13.25□□□□□ -0.29
CALU-206ENST00000542996 PDE1AP54750 535 aa13.25□□□□□ -0.29
CALU-206ENST00000542996 ADAMTS7Q9UKP4 1686 aa13.25□□□□□ -0.29
CALU-206ENST00000542996 XPCQ01831 940 aaPredicted RBP13.25□□□□□ -0.29
CALU-206ENST00000542996 PI4K2BQ8TCG2 481 aa13.24□□□□□ -0.29
CALU-206ENST00000542996 BAG4O95429 457 aaKnown RBP13.24□□□□□ -0.29
CALU-206ENST00000542996 GCC1Q96CN9 775 aa13.24□□□□□ -0.29
CALU-206ENST00000542996 TMEM63CQ9P1W3 806 aa13.24□□□□□ -0.29
CALU-206ENST00000542996 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
CALU-206ENST00000542996 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
CALU-206ENST00000542996 ARHGEF10O15013 1369 aa13.22□□□□□ -0.29
CALU-206ENST00000542996 PHRF1Q9P1Y6 1649 aaKnown RBP13.22□□□□□ -0.29
CALU-206ENST00000542996 K7ELQ4 463 aaPredicted RBP13.22□□□□□ -0.29
CALU-206ENST00000542996 IL1RAPL2Q9NP60 686 aa13.22□□□□□ -0.29
CALU-206ENST00000542996 AP5Z1O43299 807 aa13.22□□□□□ -0.29
CALU-206ENST00000542996 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
CALU-206ENST00000542996 RBSNQ9H1K0 784 aa13.22□□□□□ -0.29
CALU-206ENST00000542996 SBNO1A3KN83 1393 aa13.22□□□□□ -0.29
CALU-206ENST00000542996 CAMTA1Q9Y6Y1 1673 aa13.22□□□□□ -0.29
CALU-206ENST00000542996 SLC4A10Q6U841 1118 aa13.21□□□□□ -0.29
CALU-206ENST00000542996 LRP10Q7Z4F1 713 aa13.21□□□□□ -0.29
CALU-206ENST00000542996 LRRFIP2Q9Y608 721 aaKnown RBP13.21□□□□□ -0.29
CALU-206ENST00000542996 COL18A1P39060 1754 aa13.21□□□□□ -0.29
CALU-206ENST00000542996 GADD45BO75293 160 aaPredicted RBP13.21□□□□□ -0.29
CALU-206ENST00000542996 PDIA6Q15084 440 aa13.21□□□□□ -0.29
CALU-206ENST00000542996 NKX2-3Q8TAU0 364 aa13.21□□□□□ -0.29
CALU-206ENST00000542996 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
CALU-206ENST00000542996 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.29
CALU-206ENST00000542996 RPAP1Q9BWH6 1393 aaPredicted RBP13.21□□□□□ -0.3
CALU-206ENST00000542996 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.3
CALU-206ENST00000542996 FLIIQ13045 1269 aa13.21□□□□□ -0.3
CALU-206ENST00000542996 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
CALU-206ENST00000542996 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
CALU-206ENST00000542996 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
CALU-206ENST00000542996 GDPD2Q9HCC8 539 aa13.2□□□□□ -0.3
CALU-206ENST00000542996 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
CALU-206ENST00000542996 A0A0G2JLW4 131 aa13.2□□□□□ -0.3
CALU-206ENST00000542996 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
CALU-206ENST00000542996 GRPEL1Q9HAV7 217 aa13.19□□□□□ -0.3
CALU-206ENST00000542996 LAMA4Q16363 1823 aa13.19□□□□□ -0.3
CALU-206ENST00000542996 ADCK5Q3MIX3 580 aa13.19□□□□□ -0.3
CALU-206ENST00000542996 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
CALU-206ENST00000542996 TLR7Q9NYK1 1049 aaKnown RBP13.19□□□□□ -0.3
CALU-206ENST00000542996 FLT4P35916 1363 aa13.19□□□□□ -0.3
CALU-206ENST00000542996 IPO8O15397 1037 aaKnown RBP13.19□□□□□ -0.3
CALU-206ENST00000542996 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
CALU-206ENST00000542996 NCAPD2Q15021 1401 aa13.19□□□□□ -0.3
CALU-206ENST00000542996 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
CALU-206ENST00000542996 UPF3BQ9BZI7 483 aaKnown RBP13.18□□□□□ -0.3
CALU-206ENST00000542996 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
CALU-206ENST00000542996 NDUFB9Q9Y6M9 179 aa13.18□□□□□ -0.3
CALU-206ENST00000542996 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
CALU-206ENST00000542996 KIF24Q5T7B8 1368 aa13.18□□□□□ -0.3
CALU-206ENST00000542996 MYO5AQ9Y4I1 1855 aaKnown RBP13.18□□□□□ -0.3
CALU-206ENST00000542996 CHMLP26374 656 aa13.18□□□□□ -0.3
CALU-206ENST00000542996 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
CALU-206ENST00000542996 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
CALU-206ENST00000542996 TSPYL4Q9UJ04 414 aa13.17□□□□□ -0.3
CALU-206ENST00000542996 PA2G4Q9UQ80 394 aaKnown RBP13.17□□□□□ -0.3
CALU-206ENST00000542996 PRKCSHP14314 528 aaPredicted RBP13.17□□□□□ -0.3
CALU-206ENST00000542996 CHPF2Q9P2E5 772 aa13.17□□□□□ -0.3
CALU-206ENST00000542996 EIF4A1P60842 406 aaKnown RBP13.16□□□□□ -0.3
CALU-206ENST00000542996 PTH1RQ03431 593 aa13.16□□□□□ -0.3
CALU-206ENST00000542996 BEND3Q5T5X7 828 aa13.16□□□□□ -0.3
CALU-206ENST00000542996 POLA2Q14181 598 aa13.16□□□□□ -0.3
CALU-206ENST00000542996 LAMA3Q16787 3333 aa13.16□□□□□ -0.3
CALU-206ENST00000542996 CDC45O75419 566 aa13.15□□□□□ -0.3
CALU-206ENST00000542996 EDC3Q96F86 508 aaKnown RBP13.15□□□□□ -0.3
CALU-206ENST00000542996 XIRP1Q702N8 1843 aaKnown RBP13.15□□□□□ -0.3
CALU-206ENST00000542996 NLRP6P59044 892 aa13.15□□□□□ -0.3
CALU-206ENST00000542996 CWF19L2Q2TBE0 894 aaKnown RBP13.15□□□□□ -0.3
CALU-206ENST00000542996 FOXD4L6Q3SYB3 417 aaPredicted RBP13.15□□□□□ -0.3
CALU-206ENST00000542996 FOXD4L3Q6VB84 417 aaPredicted RBP13.15□□□□□ -0.3
CALU-206ENST00000542996 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.15□□□□□ -0.3
CALU-206ENST00000542996 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
CALU-206ENST00000542996 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.15□□□□□ -0.3
CALU-206ENST00000542996 TMX3Q96JJ7 454 aa13.15□□□□□ -0.31
CALU-206ENST00000542996 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
CALU-206ENST00000542996 ESYT1Q9BSJ8 1104 aa13.14□□□□□ -0.31
CALU-206ENST00000542996 SCN11AQ9UI33 1791 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms