RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 TOMM70O94826 608 aa21.56■■□□□ 1.04
CD4-210ENST00000541982 ITPK1Q13572 414 aa21.56■■□□□ 1.04
CD4-210ENST00000541982 NLGN1Q8N2Q7 840 aa21.56■■□□□ 1.04
CD4-210ENST00000541982 TRAPPC3LQ5T215 181 aa21.55■■□□□ 1.04
CD4-210ENST00000541982 RTCBQ9Y3I0 505 aaKnown RBP21.55■■□□□ 1.04
CD4-210ENST00000541982 ANKRD26Q9UPS8 1709 aa21.55■■□□□ 1.04
CD4-210ENST00000541982 PXDNLA1KZ92 1463 aa21.54■■□□□ 1.04
CD4-210ENST00000541982 PHKG2P15735 406 aa21.54■■□□□ 1.04
CD4-210ENST00000541982 EYA1Q99502 592 aa21.54■■□□□ 1.04
CD4-210ENST00000541982 TIMELESSQ9UNS1 1208 aa21.54■■□□□ 1.04
CD4-210ENST00000541982 BCS1LQ9Y276 419 aa21.54■■□□□ 1.04
CD4-210ENST00000541982 CARD14Q9BXL6 1004 aa21.53■■□□□ 1.04
CD4-210ENST00000541982 ATG3Q9NT62 314 aa21.53■■□□□ 1.04
CD4-210ENST00000541982 N4BP2Q86UW6 1770 aaPredicted RBP21.53■■□□□ 1.04
CD4-210ENST00000541982 PLEKHG2Q9H7P9 1386 aa21.52■■□□□ 1.04
CD4-210ENST00000541982 ADRA2BP18089 450 aa21.52■■□□□ 1.04
CD4-210ENST00000541982 CCDC87Q9NVE4 849 aa21.52■■□□□ 1.04
CD4-210ENST00000541982 ARHGAP27Q6ZUM4 889 aa21.51■■□□□ 1.03
CD4-210ENST00000541982 KIAA1551Q9HCM1 1747 aa21.51■■□□□ 1.03
CD4-210ENST00000541982 ZNF831Q5JPB2 1677 aa21.5■■□□□ 1.03
CD4-210ENST00000541982 C10orf71Q711Q0 1435 aa21.5■■□□□ 1.03
CD4-210ENST00000541982 A0A0G2JLW4 131 aa21.5■■□□□ 1.03
CD4-210ENST00000541982 RC3H1Q5TC82 1133 aaKnown RBP21.5■■□□□ 1.03
CD4-210ENST00000541982 CLSPNQ9HAW4 1339 aa21.5■■□□□ 1.03
CD4-210ENST00000541982 ERVV-2B6SEH9 535 aa21.48■■□□□ 1.03
CD4-210ENST00000541982 FCHSD2O94868 740 aa21.48■■□□□ 1.03
CD4-210ENST00000541982 HSP90AB1P08238 724 aaKnown RBP21.48■■□□□ 1.03
CD4-210ENST00000541982 RFC4P35249 363 aa21.48■■□□□ 1.03
CD4-210ENST00000541982 DNAJC5GQ8N7S2 189 aa21.48■■□□□ 1.03
CD4-210ENST00000541982 PARP3Q9Y6F1 533 aa21.48■■□□□ 1.03
CD4-210ENST00000541982 KDRP35968 1356 aa21.48■■□□□ 1.03
CD4-210ENST00000541982 C4AP0C0L4 1744 aa21.47■■□□□ 1.03
CD4-210ENST00000541982 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
CD4-210ENST00000541982 RBM42Q9BTD8 480 aaKnown RBP21.47■■□□□ 1.03
CD4-210ENST00000541982 BRCA1P38398 1863 aaKnown RBP21.46■■□□□ 1.03
CD4-210ENST00000541982 DPEP1P16444 411 aa21.46■■□□□ 1.03
CD4-210ENST00000541982 C16orf71Q8IYS4 520 aaPredicted RBP21.46■■□□□ 1.03
CD4-210ENST00000541982 POLKQ9UBT6 870 aa21.46■■□□□ 1.03
CD4-210ENST00000541982 CNTNAP4Q9C0A0 1308 aa21.46■■□□□ 1.03
CD4-210ENST00000541982 RPS6KA4O75676 772 aa21.45■■□□□ 1.02
CD4-210ENST00000541982 GYS1P13807 737 aa21.45■■□□□ 1.02
CD4-210ENST00000541982 RBM46Q8TBY0 533 aaKnown RBP21.45■■□□□ 1.02
CD4-210ENST00000541982 DCAF5Q96JK2 942 aa21.45■■□□□ 1.02
CD4-210ENST00000541982 NMRK2Q9NPI5 230 aa21.45■■□□□ 1.02
CD4-210ENST00000541982 ARFGEF1Q9Y6D6 1849 aa21.45■■□□□ 1.02
CD4-210ENST00000541982 COL5A3P25940 1745 aaPredicted RBP21.44■■□□□ 1.02
CD4-210ENST00000541982 EIF4A2Q14240 407 aaKnown RBP21.43■■□□□ 1.02
CD4-210ENST00000541982 SLC4A9Q96Q91 983 aa21.43■■□□□ 1.02
CD4-210ENST00000541982 C9orf131Q5VYM1 1079 aa21.42■■□□□ 1.02
CD4-210ENST00000541982 WDR90Q96KV7 1748 aa21.42■■□□□ 1.02
CD4-210ENST00000541982 PIM2Q9P1W9 311 aa21.42■■□□□ 1.02
CD4-210ENST00000541982 KDM2BQ8NHM5 1336 aa21.41■■□□□ 1.02
CD4-210ENST00000541982 FSTL1Q12841 308 aa21.41■■□□□ 1.02
CD4-210ENST00000541982 PLEKHO1Q53GL0 409 aaPredicted RBP21.41■■□□□ 1.02
CD4-210ENST00000541982 CABP4P57796 275 aa21.4■■□□□ 1.02
CD4-210ENST00000541982 MYH14Q7Z406 1995 aaKnown RBP21.39■■□□□ 1.02
CD4-210ENST00000541982 KCNA3P22001 575 aa21.39■■□□□ 1.01
CD4-210ENST00000541982 AMOTQ4VCS5 1084 aa21.39■■□□□ 1.01
CD4-210ENST00000541982 DALRD3Q5D0E6 543 aaKnown RBP21.39■■□□□ 1.01
CD4-210ENST00000541982 PCGF6Q9BYE7 350 aa21.38■■□□□ 1.01
CD4-210ENST00000541982 KLRG1Q96E93 195 aa21.37■■□□□ 1.01
CD4-210ENST00000541982 TNNT2P45379 298 aaPredicted RBP21.36■■□□□ 1.01
CD4-210ENST00000541982 ZNF530Q6P9A1 599 aaPredicted RBP21.36■■□□□ 1.01
CD4-210ENST00000541982 MTHFSP49914 203 aa21.35■■□□□ 1.01
CD4-210ENST00000541982 RNF181Q9P0P0 153 aa21.35■■□□□ 1.01
CD4-210ENST00000541982 PTCD1O75127 700 aaKnown RBP21.34■■□□□ 1.01
CD4-210ENST00000541982 CRKLP46109 303 aaKnown RBP21.34■■□□□ 1.01
CD4-210ENST00000541982 C1orf141Q5JVX7 400 aa21.34■■□□□ 1.01
CD4-210ENST00000541982 JMYQ8N9B5 988 aa21.34■■□□□ 1.01
CD4-210ENST00000541982 KDM6AO15550 1401 aaPredicted RBP21.34■■□□□ 1.01
CD4-210ENST00000541982 USP42Q9H9J4 1324 aaKnown RBP21.33■■□□□ 1.01
CD4-210ENST00000541982 TNRC6CQ9HCJ0 1690 aaKnown RBP21.33■■□□□ 1
CD4-210ENST00000541982 KCPQ6ZWJ8 1503 aa21.33■■□□□ 1
CD4-210ENST00000541982 SBF1O95248 1867 aa21.32■■□□□ 1
CD4-210ENST00000541982 FKBP8Q14318 412 aa21.32■■□□□ 1
CD4-210ENST00000541982 RRAGCQ9HB90 399 aa21.31■■□□□ 1
CD4-210ENST00000541982 SRP68Q9UHB9 627 aaKnown RBP21.31■■□□□ 1
CD4-210ENST00000541982 ZC3H4Q9UPT8 1303 aaKnown RBP21.3■■□□□ 1
CD4-210ENST00000541982 DDR1Q08345 913 aa21.3■■□□□ 1
CD4-210ENST00000541982 NFATC2IPQ8NCF5 419 aa21.3■■□□□ 1
CD4-210ENST00000541982 SMC1BQ8NDV3 1235 aa21.3■■□□□ 1
CD4-210ENST00000541982 POLR3GLQ9BT43 218 aa21.3■■□□□ 1
CD4-210ENST00000541982 ZPR1O75312 459 aa21.29■■□□□ 1
CD4-210ENST00000541982 HTRA3P83110 453 aa21.29■■□□□ 1
CD4-210ENST00000541982 CHRNA5P30532 468 aa21.28■■□□□ 1
CD4-210ENST00000541982 TJP1Q07157 1748 aa21.27■■□□□ 1
CD4-210ENST00000541982 POLRMTO00411 1230 aaKnown RBP21.27■■□□□ 1
CD4-210ENST00000541982 TM4SF1P30408 202 aa21.27■■□□□ 1
CD4-210ENST00000541982 COL13A1Q5TAT6 717 aaPredicted RBP21.26■□□□□ 0.99
CD4-210ENST00000541982 INTS5Q6P9B9 1019 aaKnown RBP21.25■□□□□ 0.99
CD4-210ENST00000541982 SCN11AQ9UI33 1791 aa21.25■□□□□ 0.99
CD4-210ENST00000541982 EIF4G2P78344 907 aaKnown RBP eCLIP21.24■□□□□ 0.99
CD4-210ENST00000541982 PCNTO95613 3336 aa21.24■□□□□ 0.99
CD4-210ENST00000541982 LMNB1P20700 586 aa21.23■□□□□ 0.99
CD4-210ENST00000541982 USPL1Q5W0Q7 1092 aa21.23■□□□□ 0.99
CD4-210ENST00000541982 SULT6B1Q6IMI4 303 aa21.23■□□□□ 0.99
CD4-210ENST00000541982 AEBP1Q8IUX7 1158 aa21.23■□□□□ 0.99
CD4-210ENST00000541982 ADAMTS7Q9UKP4 1686 aa21.22■□□□□ 0.99
CD4-210ENST00000541982 VEGFAP15692 232 aaPredicted RBP21.22■□□□□ 0.99
CD4-210ENST00000541982 AFDNP55196 1824 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms