RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 ARXQ96QS3 562 aa19.09■□□□□ 0.65
LTBR-209ENST00000541102 MTHFSDQ2M296 383 aaKnown RBP19.08■□□□□ 0.64
LTBR-209ENST00000541102 LINC00116Q8NCU8 138 aa19.08■□□□□ 0.64
LTBR-209ENST00000541102 POLD1P28340 1107 aa19.07■□□□□ 0.64
LTBR-209ENST00000541102 SMIM5Q71RC9 77 aa19.07■□□□□ 0.64
LTBR-209ENST00000541102 FHDC1Q9C0D6 1143 aaPredicted RBP19.07■□□□□ 0.64
LTBR-209ENST00000541102 LGR6Q9HBX8 967 aa19.07■□□□□ 0.64
LTBR-209ENST00000541102 COL3A1P02461 1466 aaPredicted RBP19.07■□□□□ 0.64
LTBR-209ENST00000541102 C5P01031 1676 aa19.07■□□□□ 0.64
LTBR-209ENST00000541102 TUBGCP6Q96RT7 1819 aa19.07■□□□□ 0.64
LTBR-209ENST00000541102 PHF14O94880 888 aa19.06■□□□□ 0.64
LTBR-209ENST00000541102 MSL1Q68DK7 614 aa19.06■□□□□ 0.64
LTBR-209ENST00000541102 KLHL34Q8N239 644 aa19.06■□□□□ 0.64
LTBR-209ENST00000541102 FLAD1Q8NFF5 587 aa19.06■□□□□ 0.64
LTBR-209ENST00000541102 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
LTBR-209ENST00000541102 SYT17Q9BSW7 474 aa19.05■□□□□ 0.64
LTBR-209ENST00000541102 PRKRIP1Q9H875 184 aaPredicted RBP19.05■□□□□ 0.64
LTBR-209ENST00000541102 NUDCQ9Y266 331 aa19.05■□□□□ 0.64
LTBR-209ENST00000541102 QSER1Q2KHR3 1735 aa19.05■□□□□ 0.64
LTBR-209ENST00000541102 TAF1LQ8IZX4 1826 aa19.04■□□□□ 0.64
LTBR-209ENST00000541102 RNMTO43148 476 aaKnown RBP19.04■□□□□ 0.64
LTBR-209ENST00000541102 PTCD1O75127 700 aaKnown RBP19.04■□□□□ 0.64
LTBR-209ENST00000541102 AMIGO3Q86WK7 504 aa19.04■□□□□ 0.64
LTBR-209ENST00000541102 SLC4A9Q96Q91 983 aa19.04■□□□□ 0.64
LTBR-209ENST00000541102 C4BP0C0L5 1744 aa19.03■□□□□ 0.64
LTBR-209ENST00000541102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.03■□□□□ 0.64
LTBR-209ENST00000541102 GNPATO15228 680 aa19.03■□□□□ 0.64
LTBR-209ENST00000541102 RALBP1Q15311 655 aa19.03■□□□□ 0.64
LTBR-209ENST00000541102 U2AF1L5P0DN76 240 aaPredicted RBP19.02■□□□□ 0.64
LTBR-209ENST00000541102 U2AF1Q01081 240 aaKnown RBP eCLIP19.02■□□□□ 0.64
LTBR-209ENST00000541102 SLC52A2Q9HAB3 445 aa19.02■□□□□ 0.64
LTBR-209ENST00000541102 PRKAR2BP31323 418 aa19.01■□□□□ 0.63
LTBR-209ENST00000541102 PHACTR3Q96KR7 559 aa19■□□□□ 0.63
LTBR-209ENST00000541102 SSFA2P28290 1259 aa18.99■□□□□ 0.63
LTBR-209ENST00000541102 GAS2L2Q8NHY3 880 aa18.99■□□□□ 0.63
LTBR-209ENST00000541102 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
LTBR-209ENST00000541102 GNAT3A8MTJ3 354 aa18.98■□□□□ 0.63
LTBR-209ENST00000541102 SLC39A6Q13433 755 aa18.98■□□□□ 0.63
LTBR-209ENST00000541102 RSPH6AQ9H0K4 717 aa18.98■□□□□ 0.63
LTBR-209ENST00000541102 SCN11AQ9UI33 1791 aa18.98■□□□□ 0.63
LTBR-209ENST00000541102 RTCBQ9Y3I0 505 aaKnown RBP18.97■□□□□ 0.63
LTBR-209ENST00000541102 CCDC184Q52MB2 194 aa18.96■□□□□ 0.63
LTBR-209ENST00000541102 TRAPPC3LQ5T215 181 aa18.96■□□□□ 0.63
LTBR-209ENST00000541102 RC3H1Q5TC82 1133 aaKnown RBP18.96■□□□□ 0.63
LTBR-209ENST00000541102 MAP3K5Q99683 1374 aa18.95■□□□□ 0.62
LTBR-209ENST00000541102 UBR3Q6ZT12 1888 aa18.95■□□□□ 0.62
LTBR-209ENST00000541102 IL17REQ8NFR9 667 aa18.95■□□□□ 0.62
LTBR-209ENST00000541102 FCHSD2O94868 740 aa18.94■□□□□ 0.62
LTBR-209ENST00000541102 TEFQ10587 303 aa18.94■□□□□ 0.62
LTBR-209ENST00000541102 CNTNAP4Q9C0A0 1308 aa18.94■□□□□ 0.62
LTBR-209ENST00000541102 RPS6KA4O75676 772 aa18.93■□□□□ 0.62
LTBR-209ENST00000541102 CRKLP46109 303 aaKnown RBP18.93■□□□□ 0.62
LTBR-209ENST00000541102 DNAJC10Q8IXB1 793 aa18.93■□□□□ 0.62
LTBR-209ENST00000541102 ARHGEF1Q92888 912 aaKnown RBP18.93■□□□□ 0.62
LTBR-209ENST00000541102 COL24A1Q17RW2 1714 aa18.92■□□□□ 0.62
LTBR-209ENST00000541102 ANP32CO43423 234 aa18.92■□□□□ 0.62
LTBR-209ENST00000541102 PELP1Q8IZL8 1130 aaKnown RBP18.92■□□□□ 0.62
LTBR-209ENST00000541102 NLGN2Q8NFZ4 835 aa18.92■□□□□ 0.62
LTBR-209ENST00000541102 RFC4P35249 363 aa18.91■□□□□ 0.62
LTBR-209ENST00000541102 TTC5Q8N0Z6 440 aa18.91■□□□□ 0.62
LTBR-209ENST00000541102 MRC1P22897 1456 aa18.9■□□□□ 0.62
LTBR-209ENST00000541102 ZNF831Q5JPB2 1677 aa18.9■□□□□ 0.62
LTBR-209ENST00000541102 GPR162Q16538 588 aa18.9■□□□□ 0.62
LTBR-209ENST00000541102 VIRMAQ69YN4 1812 aaKnown RBP18.89■□□□□ 0.61
LTBR-209ENST00000541102 ADRA2BP18089 450 aa18.89■□□□□ 0.61
LTBR-209ENST00000541102 INTS5Q6P9B9 1019 aaKnown RBP18.89■□□□□ 0.61
LTBR-209ENST00000541102 RTF1Q92541 710 aaKnown RBP18.89■□□□□ 0.61
LTBR-209ENST00000541102 MYH14Q7Z406 1995 aaKnown RBP18.88■□□□□ 0.61
LTBR-209ENST00000541102 NEFMP07197 916 aa18.88■□□□□ 0.61
LTBR-209ENST00000541102 YY1P25490 414 aa18.88■□□□□ 0.61
LTBR-209ENST00000541102 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
LTBR-209ENST00000541102 MCM10Q7L590 875 aa18.88■□□□□ 0.61
LTBR-209ENST00000541102 CCDC87Q9NVE4 849 aa18.88■□□□□ 0.61
LTBR-209ENST00000541102 ADAMTS7Q9UKP4 1686 aa18.88■□□□□ 0.61
LTBR-209ENST00000541102 COL5A3P25940 1745 aaPredicted RBP18.88■□□□□ 0.61
LTBR-209ENST00000541102 MMP10P09238 476 aa18.87■□□□□ 0.61
LTBR-209ENST00000541102 CYP19A1P11511 503 aaPredicted RBP18.87■□□□□ 0.61
LTBR-209ENST00000541102 NLGN1Q8N2Q7 840 aa18.87■□□□□ 0.61
LTBR-209ENST00000541102 CD2APQ9Y5K6 639 aa18.87■□□□□ 0.61
LTBR-209ENST00000541102 BTBD11A6QL63 1104 aa18.86■□□□□ 0.61
LTBR-209ENST00000541102 DCTN1Q14203 1278 aa18.86■□□□□ 0.61
LTBR-209ENST00000541102 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
LTBR-209ENST00000541102 ZNF496Q96IT1 587 aaPredicted RBP18.86■□□□□ 0.61
LTBR-209ENST00000541102 SRP68Q9UHB9 627 aaKnown RBP18.86■□□□□ 0.61
LTBR-209ENST00000541102 TJP1Q07157 1748 aa18.86■□□□□ 0.61
LTBR-209ENST00000541102 KCPQ6ZWJ8 1503 aa18.85■□□□□ 0.61
LTBR-209ENST00000541102 KCNQ3O43525 872 aa18.85■□□□□ 0.61
LTBR-209ENST00000541102 GYS1P13807 737 aa18.85■□□□□ 0.61
LTBR-209ENST00000541102 VSIG10Q8N0Z9 540 aa18.85■□□□□ 0.61
LTBR-209ENST00000541102 CEMIPQ8WUJ3 1361 aa18.84■□□□□ 0.61
LTBR-209ENST00000541102 STARD3NLO95772 234 aa18.83■□□□□ 0.6
LTBR-209ENST00000541102 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.6
LTBR-209ENST00000541102 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
LTBR-209ENST00000541102 ZPR1O75312 459 aa18.82■□□□□ 0.6
LTBR-209ENST00000541102 FMNL2Q96PY5 1086 aa18.82■□□□□ 0.6
LTBR-209ENST00000541102 PLEKHF1Q96S99 279 aa18.82■□□□□ 0.6
LTBR-209ENST00000541102 PNNQ9H307 717 aaKnown RBP18.82■□□□□ 0.6
LTBR-209ENST00000541102 ZBTB1Q9Y2K1 713 aa18.82■□□□□ 0.6
LTBR-209ENST00000541102 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
LTBR-209ENST00000541102 SOS1Q07889 1333 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms