RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 POLD1P28340 1107 aa27.14■■□□□ 1.94
ATN1-204ENST00000541029 LINC00116Q8NCU8 138 aa27.14■■□□□ 1.94
ATN1-204ENST00000541029 AK7Q96M32 723 aa27.14■■□□□ 1.94
ATN1-204ENST00000541029 HMOX1P09601 288 aa27.13■■□□□ 1.93
ATN1-204ENST00000541029 AMIGO3Q86WK7 504 aa27.13■■□□□ 1.93
ATN1-204ENST00000541029 DIAPH1O60610 1272 aaKnown RBP27.12■■□□□ 1.93
ATN1-204ENST00000541029 HMGB2P26583 209 aaKnown RBP27.12■■□□□ 1.93
ATN1-204ENST00000541029 ITPK1Q13572 414 aa27.12■■□□□ 1.93
ATN1-204ENST00000541029 MSL1Q68DK7 614 aa27.11■■□□□ 1.93
ATN1-204ENST00000541029 UTRNP46939 3433 aa27.11■■□□□ 1.93
ATN1-204ENST00000541029 ADAMTS7Q9UKP4 1686 aa27.11■■□□□ 1.93
ATN1-204ENST00000541029 TJP1Q07157 1748 aa27.1■■□□□ 1.93
ATN1-204ENST00000541029 DCAF8L1A6NGE4 600 aa27.1■■□□□ 1.93
ATN1-204ENST00000541029 ATP6V1AP38606 617 aa27.1■■□□□ 1.93
ATN1-204ENST00000541029 KLHL34Q8N239 644 aa27.1■■□□□ 1.93
ATN1-204ENST00000541029 CICQ96RK0 1608 aaPredicted RBP27.09■■□□□ 1.93
ATN1-204ENST00000541029 PHF14O94880 888 aa27.09■■□□□ 1.93
ATN1-204ENST00000541029 CABP4P57796 275 aa27.09■■□□□ 1.93
ATN1-204ENST00000541029 SMIM5Q71RC9 77 aa27.09■■□□□ 1.93
ATN1-204ENST00000541029 MRC1P22897 1456 aa27.08■■□□□ 1.93
ATN1-204ENST00000541029 MYH14Q7Z406 1995 aaKnown RBP27.08■■□□□ 1.93
ATN1-204ENST00000541029 FLAD1Q8NFF5 587 aa27.08■■□□□ 1.93
ATN1-204ENST00000541029 CHD4Q14839 1912 aa27.07■■□□□ 1.92
ATN1-204ENST00000541029 SLC4A9Q96Q91 983 aa27.06■■□□□ 1.92
ATN1-204ENST00000541029 RBM42Q9BTD8 480 aaKnown RBP27.06■■□□□ 1.92
ATN1-204ENST00000541029 C4AP0C0L4 1744 aa27.06■■□□□ 1.92
ATN1-204ENST00000541029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.05■■□□□ 1.92
ATN1-204ENST00000541029 AKAP4Q5JQC9 854 aa27.05■■□□□ 1.92
ATN1-204ENST00000541029 GNPATO15228 680 aa27.04■■□□□ 1.92
ATN1-204ENST00000541029 SSFA2P28290 1259 aa27.04■■□□□ 1.92
ATN1-204ENST00000541029 GOLGB1Q14789 3259 aaKnown RBP27.03■■□□□ 1.92
ATN1-204ENST00000541029 U2SURPO15042 1029 aaKnown RBP27.02■■□□□ 1.92
ATN1-204ENST00000541029 NFATC2IPQ8NCF5 419 aa27.02■■□□□ 1.92
ATN1-204ENST00000541029 MTHFSDQ2M296 383 aaKnown RBP27.01■■□□□ 1.91
ATN1-204ENST00000541029 SIPA1L3O60292 1781 aaPredicted RBP27■■□□□ 1.91
ATN1-204ENST00000541029 UBR2Q8IWV8 1755 aa27■■□□□ 1.91
ATN1-204ENST00000541029 YY1P25490 414 aa27■■□□□ 1.91
ATN1-204ENST00000541029 NLGN2Q8NFZ4 835 aa27■■□□□ 1.91
ATN1-204ENST00000541029 LGR6Q9HBX8 967 aa26.99■■□□□ 1.91
ATN1-204ENST00000541029 PTCD1O75127 700 aaKnown RBP26.98■■□□□ 1.91
ATN1-204ENST00000541029 CNTNAP4Q9C0A0 1308 aa26.97■■□□□ 1.91
ATN1-204ENST00000541029 RNMTO43148 476 aaKnown RBP26.97■■□□□ 1.91
ATN1-204ENST00000541029 SLC52A2Q9HAB3 445 aa26.97■■□□□ 1.91
ATN1-204ENST00000541029 KCPQ6ZWJ8 1503 aa26.96■■□□□ 1.91
ATN1-204ENST00000541029 PPP2R1AP30153 589 aa26.96■■□□□ 1.91
ATN1-204ENST00000541029 CFAP53Q96M91 514 aa26.96■■□□□ 1.91
ATN1-204ENST00000541029 RTCBQ9Y3I0 505 aaKnown RBP26.93■■□□□ 1.9
ATN1-204ENST00000541029 RC3H1Q5TC82 1133 aaKnown RBP26.92■■□□□ 1.9
ATN1-204ENST00000541029 KIF13BQ9NQT8 1826 aa26.91■■□□□ 1.9
ATN1-204ENST00000541029 GPR162Q16538 588 aa26.91■■□□□ 1.9
ATN1-204ENST00000541029 SLC39A6Q13433 755 aa26.9■■□□□ 1.9
ATN1-204ENST00000541029 PELP1Q8IZL8 1130 aaKnown RBP26.9■■□□□ 1.9
ATN1-204ENST00000541029 TRAPPC3LQ5T215 181 aa26.89■■□□□ 1.9
ATN1-204ENST00000541029 GAS2L2Q8NHY3 880 aa26.89■■□□□ 1.9
ATN1-204ENST00000541029 RSPH6AQ9H0K4 717 aa26.89■■□□□ 1.9
ATN1-204ENST00000541029 RPS6KA4O75676 772 aa26.88■■□□□ 1.89
ATN1-204ENST00000541029 PRKAR2BP31323 418 aa26.88■■□□□ 1.89
ATN1-204ENST00000541029 CRKLP46109 303 aaKnown RBP26.88■■□□□ 1.89
ATN1-204ENST00000541029 KIAA1551Q9HCM1 1747 aa26.87■■□□□ 1.89
ATN1-204ENST00000541029 ADRA2BP18089 450 aa26.87■■□□□ 1.89
ATN1-204ENST00000541029 CD2APQ9Y5K6 639 aa26.87■■□□□ 1.89
ATN1-204ENST00000541029 ARHGEF1Q92888 912 aaKnown RBP26.86■■□□□ 1.89
ATN1-204ENST00000541029 NUDCQ9Y266 331 aa26.86■■□□□ 1.89
ATN1-204ENST00000541029 GNAT3A8MTJ3 354 aa26.85■■□□□ 1.89
ATN1-204ENST00000541029 DNAJC10Q8IXB1 793 aa26.85■■□□□ 1.89
ATN1-204ENST00000541029 PHACTR3Q96KR7 559 aa26.85■■□□□ 1.89
ATN1-204ENST00000541029 DLG5Q8TDM6 1919 aa26.84■■□□□ 1.89
ATN1-204ENST00000541029 N4BP2Q86UW6 1770 aaPredicted RBP26.84■■□□□ 1.89
ATN1-204ENST00000541029 MMP10P09238 476 aa26.84■■□□□ 1.89
ATN1-204ENST00000541029 U2AF1L5P0DN76 240 aaPredicted RBP26.83■■□□□ 1.89
ATN1-204ENST00000541029 YBX3P16989 372 aaKnown RBP eCLIP26.83■■□□□ 1.89
ATN1-204ENST00000541029 RFC4P35249 363 aa26.83■■□□□ 1.89
ATN1-204ENST00000541029 U2AF1Q01081 240 aaKnown RBP eCLIP26.83■■□□□ 1.89
ATN1-204ENST00000541029 IL17REQ8NFR9 667 aa26.82■■□□□ 1.88
ATN1-204ENST00000541029 GYS1P13807 737 aa26.81■■□□□ 1.88
ATN1-204ENST00000541029 INTS5Q6P9B9 1019 aaKnown RBP26.81■■□□□ 1.88
ATN1-204ENST00000541029 TEFQ10587 303 aa26.8■■□□□ 1.88
ATN1-204ENST00000541029 CCDC87Q9NVE4 849 aa26.8■■□□□ 1.88
ATN1-204ENST00000541029 CEMIPQ8WUJ3 1361 aa26.8■■□□□ 1.88
ATN1-204ENST00000541029 SRP68Q9UHB9 627 aaKnown RBP26.79■■□□□ 1.88
ATN1-204ENST00000541029 NLGN1Q8N2Q7 840 aa26.78■■□□□ 1.88
ATN1-204ENST00000541029 USP42Q9H9J4 1324 aaKnown RBP26.78■■□□□ 1.88
ATN1-204ENST00000541029 C10orf71Q711Q0 1435 aa26.78■■□□□ 1.88
ATN1-204ENST00000541029 BRCA1P38398 1863 aaKnown RBP26.78■■□□□ 1.88
ATN1-204ENST00000541029 SOS1Q07889 1333 aaPredicted RBP26.77■■□□□ 1.88
ATN1-204ENST00000541029 CYP19A1P11511 503 aaPredicted RBP26.77■■□□□ 1.88
ATN1-204ENST00000541029 TTC5Q8N0Z6 440 aa26.77■■□□□ 1.88
ATN1-204ENST00000541029 PXDNLA1KZ92 1463 aa26.76■■□□□ 1.87
ATN1-204ENST00000541029 FCHSD2O94868 740 aa26.76■■□□□ 1.87
ATN1-204ENST00000541029 VSIG10Q8N0Z9 540 aa26.75■■□□□ 1.87
ATN1-204ENST00000541029 WWC3Q9ULE0 1092 aa26.75■■□□□ 1.87
ATN1-204ENST00000541029 ZBTB1Q9Y2K1 713 aa26.75■■□□□ 1.87
ATN1-204ENST00000541029 AFDNP55196 1824 aaKnown RBP26.74■■□□□ 1.87
ATN1-204ENST00000541029 COL15A1P39059 1388 aa26.74■■□□□ 1.87
ATN1-204ENST00000541029 SCN7AQ01118 1682 aa26.73■■□□□ 1.87
ATN1-204ENST00000541029 ZNF790Q6PG37 636 aa26.73■■□□□ 1.87
ATN1-204ENST00000541029 ZNF784Q8NCA9 323 aaPredicted RBP26.73■■□□□ 1.87
ATN1-204ENST00000541029 ZNF496Q96IT1 587 aaPredicted RBP26.73■■□□□ 1.87
ATN1-204ENST00000541029 HEG1Q9ULI3 1381 aa26.72■■□□□ 1.87
ATN1-204ENST00000541029 GRIN3BO60391 1043 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms