RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 EXOC6BQ9Y2D4 811 aa16.31■□□□□ 0.2
PRICKLE3-205ENST00000540849 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
PRICKLE3-205ENST00000540849 GNAI2P04899 355 aa16.3■□□□□ 0.2
PRICKLE3-205ENST00000540849 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
PRICKLE3-205ENST00000540849 CWC22Q9HCG8 908 aaKnown RBP16.3■□□□□ 0.2
PRICKLE3-205ENST00000540849 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
PRICKLE3-205ENST00000540849 ZDHHC9Q9Y397 364 aa16.29■□□□□ 0.2
PRICKLE3-205ENST00000540849 MARF1Q9Y4F3 1742 aaKnown RBP16.29■□□□□ 0.2
PRICKLE3-205ENST00000540849 AMPHP49418 695 aa16.29■□□□□ 0.2
PRICKLE3-205ENST00000540849 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
PRICKLE3-205ENST00000540849 NWD1Q149M9 1564 aa16.28■□□□□ 0.2
PRICKLE3-205ENST00000540849 NASPP49321 788 aaPredicted RBP16.28■□□□□ 0.2
PRICKLE3-205ENST00000540849 FLIIQ13045 1269 aa16.28■□□□□ 0.2
PRICKLE3-205ENST00000540849 TRIM44Q96DX7 344 aaPredicted RBP16.28■□□□□ 0.2
PRICKLE3-205ENST00000540849 ZNF445P59923 1031 aa16.27■□□□□ 0.2
PRICKLE3-205ENST00000540849 NAP1L5Q96NT1 182 aaPredicted RBP16.27■□□□□ 0.2
PRICKLE3-205ENST00000540849 PNMA6EA0A0J9YXQ4 647 aa16.27■□□□□ 0.19
PRICKLE3-205ENST00000540849 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.19
PRICKLE3-205ENST00000540849 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
PRICKLE3-205ENST00000540849 CAVIN1Q6NZI2 390 aaKnown RBP16.26■□□□□ 0.19
PRICKLE3-205ENST00000540849 NECTIN2Q92692 538 aa16.26■□□□□ 0.19
PRICKLE3-205ENST00000540849 PPP1R9BQ96SB3 815 aa16.26■□□□□ 0.19
PRICKLE3-205ENST00000540849 ESYT1Q9BSJ8 1104 aa16.26■□□□□ 0.19
PRICKLE3-205ENST00000540849 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
PRICKLE3-205ENST00000540849 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
PRICKLE3-205ENST00000540849 FKBP5Q13451 457 aaPredicted RBP16.26■□□□□ 0.19
PRICKLE3-205ENST00000540849 NGDNQ8NEJ9 315 aaKnown RBP16.26■□□□□ 0.19
PRICKLE3-205ENST00000540849 GNAI3P08754 354 aa16.25■□□□□ 0.19
PRICKLE3-205ENST00000540849 NCLP19338 710 aaKnown RBP16.25■□□□□ 0.19
PRICKLE3-205ENST00000540849 MX1P20591 662 aa16.25■□□□□ 0.19
PRICKLE3-205ENST00000540849 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
PRICKLE3-205ENST00000540849 ZSCAN23Q3MJ62 389 aa16.25■□□□□ 0.19
PRICKLE3-205ENST00000540849 CCDC30Q5VVM6 783 aa16.25■□□□□ 0.19
PRICKLE3-205ENST00000540849 EID1Q9Y6B2 187 aa16.25■□□□□ 0.19
PRICKLE3-205ENST00000540849 PXDNLA1KZ92 1463 aa16.24■□□□□ 0.19
PRICKLE3-205ENST00000540849 SLIT1O75093 1534 aa16.24■□□□□ 0.19
PRICKLE3-205ENST00000540849 CHAMP1Q96JM3 812 aa16.24■□□□□ 0.19
PRICKLE3-205ENST00000540849 ARHGAP23Q9P227 1491 aa16.24■□□□□ 0.19
PRICKLE3-205ENST00000540849 USP54Q70EL1 1684 aa16.24■□□□□ 0.19
PRICKLE3-205ENST00000540849 GNAT3A8MTJ3 354 aa16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 NEK4P51957 841 aa16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 GPT2Q8TD30 523 aa16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 PALD1Q9ULE6 856 aa16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 LRRFIP2Q9Y608 721 aaKnown RBP16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 MAP3K5Q99683 1374 aa16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 PRPF40AO75400 957 aaKnown RBP16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 CHMLP26374 656 aa16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 CEBPAP49715 358 aaPredicted RBP16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 TMX3Q96JJ7 454 aa16.23■□□□□ 0.19
PRICKLE3-205ENST00000540849 HOXC9P31274 260 aa16.22■□□□□ 0.19
PRICKLE3-205ENST00000540849 RBM27Q9P2N5 1060 aaKnown RBP16.22■□□□□ 0.19
PRICKLE3-205ENST00000540849 CACNA1FO60840 1977 aa16.22■□□□□ 0.19
PRICKLE3-205ENST00000540849 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
PRICKLE3-205ENST00000540849 STAP2Q9UGK3 403 aa16.22■□□□□ 0.19
PRICKLE3-205ENST00000540849 UNC5CLQ8IV45 518 aa16.21■□□□□ 0.19
PRICKLE3-205ENST00000540849 RILPL2Q969X0 211 aa16.21■□□□□ 0.19
PRICKLE3-205ENST00000540849 SOS1Q07889 1333 aaPredicted RBP16.21■□□□□ 0.18
PRICKLE3-205ENST00000540849 TRIM6-TRIM34B2RNG4 842 aa16.21■□□□□ 0.18
PRICKLE3-205ENST00000540849 NLRP6P59044 892 aa16.21■□□□□ 0.18
PRICKLE3-205ENST00000540849 RBSNQ9H1K0 784 aa16.21■□□□□ 0.18
PRICKLE3-205ENST00000540849 TBX22Q9Y458 520 aa16.21■□□□□ 0.18
PRICKLE3-205ENST00000540849 MCCP23508 829 aa16.2■□□□□ 0.18
PRICKLE3-205ENST00000540849 CUL4AQ13619 759 aa16.2■□□□□ 0.18
PRICKLE3-205ENST00000540849 FOXD4L5Q5VV16 416 aaPredicted RBP16.2■□□□□ 0.18
PRICKLE3-205ENST00000540849 NUTM2GQ5VZR2 741 aa16.2■□□□□ 0.18
PRICKLE3-205ENST00000540849 FOXD4L4Q8WXT5 416 aaPredicted RBP16.2■□□□□ 0.18
PRICKLE3-205ENST00000540849 ANP32BQ92688 251 aaKnown RBP16.2■□□□□ 0.18
PRICKLE3-205ENST00000540849 ANO2Q9NQ90 1003 aa16.2■□□□□ 0.18
PRICKLE3-205ENST00000540849 MCM2P49736 904 aa16.19■□□□□ 0.18
PRICKLE3-205ENST00000540849 USP44Q9H0E7 712 aa16.19■□□□□ 0.18
PRICKLE3-205ENST00000540849 ANKARQ7Z5J8 1434 aa16.19■□□□□ 0.18
PRICKLE3-205ENST00000540849 AOX1Q06278 1338 aa16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 PRIM1P49642 420 aaKnown RBP16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 ANAPC15P60006 121 aa16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 TAF7Q15545 349 aaPredicted RBP16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 BABAM1Q9NWV8 329 aa16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 NSFL1CQ9UNZ2 370 aaKnown RBP16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 BRD1O95696 1058 aa16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 NOL8Q76FK4 1167 aaKnown RBP16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 IL17RAQ96F46 866 aa16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 LTV1Q96GA3 475 aaPredicted RBP16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 IL25Q9H293 177 aa16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 TMEM63CQ9P1W3 806 aa16.18■□□□□ 0.18
PRICKLE3-205ENST00000540849 UBTFL1P0CB47 393 aaPredicted RBP16.17■□□□□ 0.18
PRICKLE3-205ENST00000540849 IL1RAPL2Q9NP60 686 aa16.17■□□□□ 0.18
PRICKLE3-205ENST00000540849 HDGFL1Q5TGJ6 251 aa16.17■□□□□ 0.18
PRICKLE3-205ENST00000540849 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
PRICKLE3-205ENST00000540849 PHAXQ9H814 394 aaKnown RBP16.17■□□□□ 0.18
PRICKLE3-205ENST00000540849 MED1Q15648 1581 aaPredicted RBP16.16■□□□□ 0.18
PRICKLE3-205ENST00000540849 ZSCAN30Q86W11 494 aa16.16■□□□□ 0.18
PRICKLE3-205ENST00000540849 USHBP1Q8N6Y0 703 aa16.16■□□□□ 0.18
PRICKLE3-205ENST00000540849 LTN1O94822 1766 aa16.16■□□□□ 0.18
PRICKLE3-205ENST00000540849 NUTM1Q86Y26 1132 aa16.15■□□□□ 0.18
PRICKLE3-205ENST00000540849 POLA2Q14181 598 aa16.15■□□□□ 0.18
PRICKLE3-205ENST00000540849 INTS4Q96HW7 963 aaKnown RBP16.15■□□□□ 0.18
PRICKLE3-205ENST00000540849 LRSAM1Q6UWE0 723 aa16.14■□□□□ 0.17
PRICKLE3-205ENST00000540849 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
PRICKLE3-205ENST00000540849 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
PRICKLE3-205ENST00000540849 KDM3BQ7LBC6 1761 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms