RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 CABP4P57796 275 aa14.51□□□□□ -0.09
SLC3A2-215ENST00000539891 MTHFSDQ2M296 383 aaKnown RBP14.51□□□□□ -0.09
SLC3A2-215ENST00000539891 MRC1P22897 1456 aa14.51□□□□□ -0.09
SLC3A2-215ENST00000539891 SGIP1Q9BQI5 828 aa14.5□□□□□ -0.09
SLC3A2-215ENST00000539891 COL5A3P25940 1745 aaPredicted RBP14.5□□□□□ -0.09
SLC3A2-215ENST00000539891 DDX10Q13206 875 aaKnown RBP14.49□□□□□ -0.09
SLC3A2-215ENST00000539891 NFATC2IPQ8NCF5 419 aa14.49□□□□□ -0.09
SLC3A2-215ENST00000539891 RSPH6AQ9H0K4 717 aa14.49□□□□□ -0.09
SLC3A2-215ENST00000539891 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
SLC3A2-215ENST00000539891 CICQ96RK0 1608 aaPredicted RBP14.49□□□□□ -0.09
SLC3A2-215ENST00000539891 RNMTO43148 476 aaKnown RBP14.48□□□□□ -0.09
SLC3A2-215ENST00000539891 RALBP1Q15311 655 aa14.48□□□□□ -0.09
SLC3A2-215ENST00000539891 FLAD1Q8NFF5 587 aa14.48□□□□□ -0.09
SLC3A2-215ENST00000539891 GAS2L2Q8NHY3 880 aa14.48□□□□□ -0.09
SLC3A2-215ENST00000539891 LGR6Q9HBX8 967 aa14.48□□□□□ -0.09
SLC3A2-215ENST00000539891 PPP1R1BQ9UD71 204 aaPredicted RBP14.48□□□□□ -0.09
SLC3A2-215ENST00000539891 SIPA1L3O60292 1781 aaPredicted RBP14.47□□□□□ -0.09
SLC3A2-215ENST00000539891 FCHSD2O94868 740 aa14.47□□□□□ -0.09
SLC3A2-215ENST00000539891 ATP6V1AP38606 617 aa14.47□□□□□ -0.09
SLC3A2-215ENST00000539891 ITPK1Q13572 414 aa14.47□□□□□ -0.09
SLC3A2-215ENST00000539891 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
SLC3A2-215ENST00000539891 SLC4A9Q96Q91 983 aa14.47□□□□□ -0.09
SLC3A2-215ENST00000539891 SLC52A2Q9HAB3 445 aa14.47□□□□□ -0.09
SLC3A2-215ENST00000539891 MYH14Q7Z406 1995 aaKnown RBP14.47□□□□□ -0.09
SLC3A2-215ENST00000539891 U2AF1L5P0DN76 240 aaPredicted RBP14.46□□□□□ -0.09
SLC3A2-215ENST00000539891 PRKAR2BP31323 418 aa14.46□□□□□ -0.09
SLC3A2-215ENST00000539891 U2AF1Q01081 240 aaKnown RBP eCLIP14.46□□□□□ -0.092e-23■□□□□ 11.2
SLC3A2-215ENST00000539891 COL23A1Q86Y22 540 aaPredicted RBP14.46□□□□□ -0.09
SLC3A2-215ENST00000539891 AK7Q96M32 723 aa14.46□□□□□ -0.09
SLC3A2-215ENST00000539891 MAP3K5Q99683 1374 aa14.46□□□□□ -0.1
SLC3A2-215ENST00000539891 PHACTR3Q96KR7 559 aa14.45□□□□□ -0.1
SLC3A2-215ENST00000539891 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
SLC3A2-215ENST00000539891 UBR2Q8IWV8 1755 aa14.45□□□□□ -0.1
SLC3A2-215ENST00000539891 TJP1Q07157 1748 aa14.45□□□□□ -0.1
SLC3A2-215ENST00000539891 GNAT3A8MTJ3 354 aa14.44□□□□□ -0.1
SLC3A2-215ENST00000539891 SSFA2P28290 1259 aa14.44□□□□□ -0.1
SLC3A2-215ENST00000539891 DLG5Q8TDM6 1919 aa14.44□□□□□ -0.1
SLC3A2-215ENST00000539891 RC3H1Q5TC82 1133 aaKnown RBP14.43□□□□□ -0.1
SLC3A2-215ENST00000539891 CNTNAP4Q9C0A0 1308 aa14.43□□□□□ -0.1
SLC3A2-215ENST00000539891 AMIGO3Q86WK7 504 aa14.42□□□□□ -0.1
SLC3A2-215ENST00000539891 IL17REQ8NFR9 667 aa14.42□□□□□ -0.1
SLC3A2-215ENST00000539891 ARXQ96QS3 562 aa14.42□□□□□ -0.1
SLC3A2-215ENST00000539891 CEMIPQ8WUJ3 1361 aa14.42□□□□□ -0.1
SLC3A2-215ENST00000539891 KCPQ6ZWJ8 1503 aa14.42□□□□□ -0.1
SLC3A2-215ENST00000539891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.41□□□□□ -0.1
SLC3A2-215ENST00000539891 MSH5O43196 834 aa14.41□□□□□ -0.1
SLC3A2-215ENST00000539891 PTCD1O75127 700 aaKnown RBP14.41□□□□□ -0.1
SLC3A2-215ENST00000539891 POLD1P28340 1107 aa14.41□□□□□ -0.1
SLC3A2-215ENST00000539891 MYBBP1AQ9BQG0 1328 aaKnown RBP14.41□□□□□ -0.1
SLC3A2-215ENST00000539891 GNPATO15228 680 aa14.41□□□□□ -0.1
SLC3A2-215ENST00000539891 FHDC1Q9C0D6 1143 aaPredicted RBP14.41□□□□□ -0.1
SLC3A2-215ENST00000539891 TEFQ10587 303 aa14.4□□□□□ -0.1
SLC3A2-215ENST00000539891 SLC39A6Q13433 755 aa14.4□□□□□ -0.1
SLC3A2-215ENST00000539891 SYT17Q9BSW7 474 aa14.4□□□□□ -0.1
SLC3A2-215ENST00000539891 C4AP0C0L4 1744 aa14.39□□□□□ -0.11
SLC3A2-215ENST00000539891 HTATSF1O43719 755 aaKnown RBP14.39□□□□□ -0.11
SLC3A2-215ENST00000539891 RPS6KA4O75676 772 aa14.39□□□□□ -0.11
SLC3A2-215ENST00000539891 PHF14O94880 888 aa14.39□□□□□ -0.11
SLC3A2-215ENST00000539891 ADRA2BP18089 450 aa14.39□□□□□ -0.11
SLC3A2-215ENST00000539891 VSIG10Q8N0Z9 540 aa14.39□□□□□ -0.11
SLC3A2-215ENST00000539891 PLEKHF1Q96S99 279 aa14.39□□□□□ -0.11
SLC3A2-215ENST00000539891 RTCBQ9Y3I0 505 aaKnown RBP14.39□□□□□ -0.11
SLC3A2-215ENST00000539891 TRAPPC3LQ5T215 181 aa14.38□□□□□ -0.11
SLC3A2-215ENST00000539891 SMIM5Q71RC9 77 aa14.38□□□□□ -0.11
SLC3A2-215ENST00000539891 PNNQ9H307 717 aaKnown RBP14.38□□□□□ -0.11
SLC3A2-215ENST00000539891 NEFMP07197 916 aa14.37□□□□□ -0.11
SLC3A2-215ENST00000539891 CRKLP46109 303 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-215ENST00000539891 RTF1Q92541 710 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-215ENST00000539891 PRKRIP1Q9H875 184 aaPredicted RBP14.37□□□□□ -0.11
SLC3A2-215ENST00000539891 MSL1Q68DK7 614 aa14.36□□□□□ -0.11
SLC3A2-215ENST00000539891 INTS5Q6P9B9 1019 aaKnown RBP14.36□□□□□ -0.11
SLC3A2-215ENST00000539891 ZNF790Q6PG37 636 aa14.36□□□□□ -0.11
SLC3A2-215ENST00000539891 DNAJC10Q8IXB1 793 aa14.36□□□□□ -0.11
SLC3A2-215ENST00000539891 TTC5Q8N0Z6 440 aa14.36□□□□□ -0.11
SLC3A2-215ENST00000539891 CYP19A1P11511 503 aaPredicted RBP14.35□□□□□ -0.11
SLC3A2-215ENST00000539891 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
SLC3A2-215ENST00000539891 ZNF316A6NFI3 1004 aaPredicted RBP14.34□□□□□ -0.11
SLC3A2-215ENST00000539891 NFE2L2Q16236 605 aa14.34□□□□□ -0.11
SLC3A2-215ENST00000539891 MCM10Q7L590 875 aa14.34□□□□□ -0.11
SLC3A2-215ENST00000539891 CCDC87Q9NVE4 849 aa14.34□□□□□ -0.11
SLC3A2-215ENST00000539891 GOLGB1Q14789 3259 aaKnown RBP14.34□□□□□ -0.11
SLC3A2-215ENST00000539891 UTRNP46939 3433 aa14.33□□□□□ -0.12
SLC3A2-215ENST00000539891 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.12
SLC3A2-215ENST00000539891 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
SLC3A2-215ENST00000539891 BTBD11A6QL63 1104 aa14.33□□□□□ -0.12
SLC3A2-215ENST00000539891 RFC4P35249 363 aa14.33□□□□□ -0.12
SLC3A2-215ENST00000539891 NLGN1Q8N2Q7 840 aa14.33□□□□□ -0.12
SLC3A2-215ENST00000539891 ZNF496Q96IT1 587 aaPredicted RBP14.33□□□□□ -0.12
SLC3A2-215ENST00000539891 MAPK8IP3Q9UPT6 1336 aa14.32□□□□□ -0.12
SLC3A2-215ENST00000539891 KIF13BQ9NQT8 1826 aa14.32□□□□□ -0.12
SLC3A2-215ENST00000539891 DCTN1Q14203 1278 aa14.32□□□□□ -0.12
SLC3A2-215ENST00000539891 FMNL2Q96PY5 1086 aa14.32□□□□□ -0.12
SLC3A2-215ENST00000539891 TEX13AQ9BXU3 409 aaPredicted RBP14.32□□□□□ -0.12
SLC3A2-215ENST00000539891 SOS1Q07889 1333 aaPredicted RBP14.32□□□□□ -0.12
SLC3A2-215ENST00000539891 GYS1P13807 737 aa14.31□□□□□ -0.12
SLC3A2-215ENST00000539891 TAF7Q15545 349 aaPredicted RBP14.31□□□□□ -0.12
SLC3A2-215ENST00000539891 CD2APQ9Y5K6 639 aa14.31□□□□□ -0.12
SLC3A2-215ENST00000539891 CHD4Q14839 1912 aa14.31□□□□□ -0.12
SLC3A2-215ENST00000539891 KDM3BQ7LBC6 1761 aa14.31□□□□□ -0.12
SLC3A2-215ENST00000539891 USP42Q9H9J4 1324 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms