RNA–Protein interactions for RNA: ENST00000539587.5

LRTOMT-217, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-217ENST00000539587 ASAP1Q9ULH1 1129 aa10.23□□□□□ -0.77
LRTOMT-217ENST00000539587 C10orf71Q711Q0 1435 aa10.23□□□□□ -0.77
LRTOMT-217ENST00000539587 ST20-MTHFSA0A0A6YYL1 179 aa10.22□□□□□ -0.77
LRTOMT-217ENST00000539587 MMP10P09238 476 aa10.22□□□□□ -0.77
LRTOMT-217ENST00000539587 GGNBP2Q9H3C7 697 aa10.22□□□□□ -0.77
LRTOMT-217ENST00000539587 ATG3Q9NT62 314 aa10.22□□□□□ -0.77
LRTOMT-217ENST00000539587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.22□□□□□ -0.77
LRTOMT-217ENST00000539587 DPEP1P16444 411 aa10.21□□□□□ -0.77
LRTOMT-217ENST00000539587 HTRA3P83110 453 aa10.21□□□□□ -0.77
LRTOMT-217ENST00000539587 FLT4P35916 1363 aa10.21□□□□□ -0.78
LRTOMT-217ENST00000539587 TONSLQ96HA7 1378 aa10.21□□□□□ -0.78
LRTOMT-217ENST00000539587 C4AP0C0L4 1744 aa10.2□□□□□ -0.78
LRTOMT-217ENST00000539587 COL5A3P25940 1745 aaPredicted RBP10.2□□□□□ -0.78
LRTOMT-217ENST00000539587 KDRP35968 1356 aa10.2□□□□□ -0.78
LRTOMT-217ENST00000539587 FSTL1Q12841 308 aa10.2□□□□□ -0.78
LRTOMT-217ENST00000539587 RC3H1Q5TC82 1133 aaKnown RBP10.2□□□□□ -0.78
LRTOMT-217ENST00000539587 ARHGAP27Q6ZUM4 889 aa10.2□□□□□ -0.78
LRTOMT-217ENST00000539587 NLGN1Q8N2Q7 840 aa10.2□□□□□ -0.78
LRTOMT-217ENST00000539587 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
LRTOMT-217ENST00000539587 ANKRD26Q9UPS8 1709 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 SMG6Q86US8 1419 aaKnown RBP10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 GNPATO15228 680 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 GYS1P13807 737 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 ATP6V1AP38606 617 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 PRELPP51888 382 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 TMF1P82094 1093 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 C9orf131Q5VYM1 1079 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 CARD14Q9BXL6 1004 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 BCS1LQ9Y276 419 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 KIF20BQ96Q89 1820 aa10.19□□□□□ -0.78
LRTOMT-217ENST00000539587 WASHC2AQ641Q2 1341 aa10.18□□□□□ -0.78
LRTOMT-217ENST00000539587 SLC24A1O60721 1099 aa10.18□□□□□ -0.78
LRTOMT-217ENST00000539587 PHKG2P15735 406 aa10.18□□□□□ -0.78
LRTOMT-217ENST00000539587 TRAPPC3LQ5T215 181 aa10.18□□□□□ -0.78
LRTOMT-217ENST00000539587 DCAF5Q96JK2 942 aa10.18□□□□□ -0.78
LRTOMT-217ENST00000539587 EYA1Q99502 592 aa10.18□□□□□ -0.78
LRTOMT-217ENST00000539587 EMILIN1Q9Y6C2 1016 aa10.18□□□□□ -0.78
LRTOMT-217ENST00000539587 ADRA2BP18089 450 aa10.17□□□□□ -0.78
LRTOMT-217ENST00000539587 TMOD3Q9NYL9 352 aa10.17□□□□□ -0.78
LRTOMT-217ENST00000539587 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
LRTOMT-217ENST00000539587 ADAMTS7Q9UKP4 1686 aa10.16□□□□□ -0.78
LRTOMT-217ENST00000539587 RPS6KA4O75676 772 aa10.16□□□□□ -0.78
LRTOMT-217ENST00000539587 FCHSD2O94868 740 aa10.16□□□□□ -0.78
LRTOMT-217ENST00000539587 IFNL2Q8IZJ0 200 aa10.16□□□□□ -0.78
LRTOMT-217ENST00000539587 RRAGCQ9HB90 399 aa10.16□□□□□ -0.78
LRTOMT-217ENST00000539587 KCPQ6ZWJ8 1503 aa10.16□□□□□ -0.78
LRTOMT-217ENST00000539587 KDM6AO15550 1401 aaPredicted RBP10.16□□□□□ -0.78
LRTOMT-217ENST00000539587 TNRC6CQ9HCJ0 1690 aaKnown RBP10.15□□□□□ -0.78
LRTOMT-217ENST00000539587 PLEKHG2Q9H7P9 1386 aa10.15□□□□□ -0.78
LRTOMT-217ENST00000539587 CCDC88AQ3V6T2 1871 aa10.15□□□□□ -0.78
LRTOMT-217ENST00000539587 CNTNAP4Q9C0A0 1308 aa10.15□□□□□ -0.78
LRTOMT-217ENST00000539587 CCDC87Q9NVE4 849 aa10.15□□□□□ -0.78
LRTOMT-217ENST00000539587 PIM2Q9P1W9 311 aa10.15□□□□□ -0.78
LRTOMT-217ENST00000539587 RTCBQ9Y3I0 505 aaKnown RBP10.15□□□□□ -0.78
LRTOMT-217ENST00000539587 ERVV-2B6SEH9 535 aa10.14□□□□□ -0.79
LRTOMT-217ENST00000539587 TM4SF1P30408 202 aa10.14□□□□□ -0.79
LRTOMT-217ENST00000539587 DDR1Q08345 913 aa10.14□□□□□ -0.79
LRTOMT-217ENST00000539587 POTECB2RU33 542 aa10.13□□□□□ -0.79
LRTOMT-217ENST00000539587 DALRD3Q5D0E6 543 aaKnown RBP10.13□□□□□ -0.79
LRTOMT-217ENST00000539587 TNS4Q8IZW8 715 aa10.13□□□□□ -0.79
LRTOMT-217ENST00000539587 POLKQ9UBT6 870 aa10.13□□□□□ -0.79
LRTOMT-217ENST00000539587 PARP3Q9Y6F1 533 aa10.13□□□□□ -0.79
LRTOMT-217ENST00000539587 AFDNP55196 1824 aaKnown RBP10.12□□□□□ -0.79
LRTOMT-217ENST00000539587 KDM2BQ8NHM5 1336 aa10.12□□□□□ -0.79
LRTOMT-217ENST00000539587 FKBP8Q14318 412 aa10.12□□□□□ -0.79
LRTOMT-217ENST00000539587 ZC3H4Q9UPT8 1303 aaKnown RBP10.11□□□□□ -0.79
LRTOMT-217ENST00000539587 NRXN2Q9P2S2 1712 aa10.11□□□□□ -0.79
LRTOMT-217ENST00000539587 CAPN15O75808 1086 aa10.11□□□□□ -0.79
LRTOMT-217ENST00000539587 RFC4P35249 363 aa10.11□□□□□ -0.79
LRTOMT-217ENST00000539587 C16orf71Q8IYS4 520 aaPredicted RBP10.11□□□□□ -0.79
LRTOMT-217ENST00000539587 SMC1BQ8NDV3 1235 aa10.11□□□□□ -0.79
LRTOMT-217ENST00000539587 RNF181Q9P0P0 153 aa10.11□□□□□ -0.79
LRTOMT-217ENST00000539587 SRP68Q9UHB9 627 aaKnown RBP10.11□□□□□ -0.79
LRTOMT-217ENST00000539587 USP42Q9H9J4 1324 aaKnown RBP10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 DICER1Q9UPY3 1922 aaKnown RBP10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 GLTPD2A6NH11 291 aa10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 POLRMTO00411 1230 aaKnown RBP10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 CHRNA5P30532 468 aa10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 EIF4A2Q14240 407 aaKnown RBP10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 INTS5Q6P9B9 1019 aaKnown RBP10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 DLEC1Q9Y238 1755 aa10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 TJP1Q07157 1748 aa10.1□□□□□ -0.79
LRTOMT-217ENST00000539587 HSPA1AP0DMV8 641 aaKnown RBP10.08□□□□□ -0.8
LRTOMT-217ENST00000539587 HSPA1BP0DMV9 641 aaKnown RBP10.08□□□□□ -0.8
LRTOMT-217ENST00000539587 VEGFAP15692 232 aaPredicted RBP10.08□□□□□ -0.8
LRTOMT-217ENST00000539587 CRKLP46109 303 aaKnown RBP10.08□□□□□ -0.8
LRTOMT-217ENST00000539587 LMNB1P20700 586 aa10.07□□□□□ -0.8
LRTOMT-217ENST00000539587 SCN11AQ9UI33 1791 aa10.06□□□□□ -0.8
LRTOMT-217ENST00000539587 NFKBIEO00221 500 aa10.06□□□□□ -0.8
LRTOMT-217ENST00000539587 PPM1GO15355 546 aaPredicted RBP10.06□□□□□ -0.8
LRTOMT-217ENST00000539587 HSP90AB1P08238 724 aaKnown RBP10.06□□□□□ -0.8
LRTOMT-217ENST00000539587 RASSF7Q02833 373 aa10.06□□□□□ -0.8
LRTOMT-217ENST00000539587 NFATC2IPQ8NCF5 419 aa10.06□□□□□ -0.8
LRTOMT-217ENST00000539587 BCL2L12Q9HB09 334 aa10.06□□□□□ -0.8
LRTOMT-217ENST00000539587 FER1L6Q2WGJ9 1857 aa10.06□□□□□ -0.8
LRTOMT-217ENST00000539587 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
LRTOMT-217ENST00000539587 CABP4P57796 275 aa10.05□□□□□ -0.8
LRTOMT-217ENST00000539587 PLEKHO1Q53GL0 409 aaPredicted RBP10.05□□□□□ -0.8
LRTOMT-217ENST00000539587 CDCA8Q53HL2 280 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms