RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SPG7Q9UQ90 795 aa21.63■■□□□ 1.05
PCDHB17P-201ENST00000539533 SLC4A2P04920 1241 aa21.62■■□□□ 1.05
PCDHB17P-201ENST00000539533 VIRMAQ69YN4 1812 aaKnown RBP21.62■■□□□ 1.05
PCDHB17P-201ENST00000539533 KCNQ3O43525 872 aa21.62■■□□□ 1.05
PCDHB17P-201ENST00000539533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.62■■□□□ 1.05
PCDHB17P-201ENST00000539533 BTBD11A6QL63 1104 aa21.61■■□□□ 1.05
PCDHB17P-201ENST00000539533 PIP4K2BP78356 416 aa21.61■■□□□ 1.05
PCDHB17P-201ENST00000539533 LARP1Q6PKG0 1096 aaKnown RBP21.61■■□□□ 1.05
PCDHB17P-201ENST00000539533 PHKG2P15735 406 aa21.61■■□□□ 1.05
PCDHB17P-201ENST00000539533 EVA1CP58658 441 aa21.61■■□□□ 1.05
PCDHB17P-201ENST00000539533 NECTIN2Q92692 538 aa21.6■■□□□ 1.05
PCDHB17P-201ENST00000539533 CYP27B1O15528 508 aa21.59■■□□□ 1.05
PCDHB17P-201ENST00000539533 EIF4A1P60842 406 aaKnown RBP21.59■■□□□ 1.05
PCDHB17P-201ENST00000539533 API5Q9BZZ5 524 aaKnown RBP21.59■■□□□ 1.05
PCDHB17P-201ENST00000539533 ABCC4O15439 1325 aa21.59■■□□□ 1.05
PCDHB17P-201ENST00000539533 IFNL2Q8IZJ0 200 aa21.59■■□□□ 1.05
PCDHB17P-201ENST00000539533 OVOS2A0A0G2JMS6 1433 aa21.58■■□□□ 1.05
PCDHB17P-201ENST00000539533 TOM1O60784 492 aa21.58■■□□□ 1.05
PCDHB17P-201ENST00000539533 G2E3Q7L622 706 aa21.58■■□□□ 1.05
PCDHB17P-201ENST00000539533 BTG4Q9NY30 223 aa21.58■■□□□ 1.05
PCDHB17P-201ENST00000539533 CARD10Q9BWT7 1032 aa21.58■■□□□ 1.04
PCDHB17P-201ENST00000539533 ZBTB40Q9NUA8 1239 aa21.58■■□□□ 1.04
PCDHB17P-201ENST00000539533 KDM3BQ7LBC6 1761 aa21.57■■□□□ 1.04
PCDHB17P-201ENST00000539533 KDM6AO15550 1401 aaPredicted RBP21.57■■□□□ 1.04
PCDHB17P-201ENST00000539533 ADAMTS7Q9UKP4 1686 aa21.56■■□□□ 1.04
PCDHB17P-201ENST00000539533 CCDC30Q5VVM6 783 aa21.56■■□□□ 1.04
PCDHB17P-201ENST00000539533 STK31Q9BXU1 1019 aa21.55■■□□□ 1.04
PCDHB17P-201ENST00000539533 RGS12O14924 1447 aa21.55■■□□□ 1.04
PCDHB17P-201ENST00000539533 PHLPP1O60346 1717 aa21.55■■□□□ 1.04
PCDHB17P-201ENST00000539533 PKD1L3Q7Z443 1732 aa21.55■■□□□ 1.04
PCDHB17P-201ENST00000539533 ZBTB7BO15156 539 aaPredicted RBP21.55■■□□□ 1.04
PCDHB17P-201ENST00000539533 COL22A1Q8NFW1 1626 aaPredicted RBP21.55■■□□□ 1.04
PCDHB17P-201ENST00000539533 PLEKHG2Q9H7P9 1386 aa21.54■■□□□ 1.04
PCDHB17P-201ENST00000539533 PTPRCP08575 1304 aa21.54■■□□□ 1.04
PCDHB17P-201ENST00000539533 SOS1Q07889 1333 aaPredicted RBP21.54■■□□□ 1.04
PCDHB17P-201ENST00000539533 NFATC2IPQ8NCF5 419 aa21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 COL16A1Q07092 1604 aaPredicted RBP21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 SIPA1L3O60292 1781 aaPredicted RBP21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 SCN11AQ9UI33 1791 aa21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 IL2RBP14784 551 aa21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 EIF2S2P20042 333 aaKnown RBP21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 FAM161AQ3B820 660 aa21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 HDGFL1Q5TGJ6 251 aa21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 ZCRB1Q8TBF4 217 aaKnown RBP21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.53■■□□□ 1.04
PCDHB17P-201ENST00000539533 UBAP1LF5GYI3 381 aa21.52■■□□□ 1.04
PCDHB17P-201ENST00000539533 DCAF5Q96JK2 942 aa21.52■■□□□ 1.04
PCDHB17P-201ENST00000539533 PARP4Q9UKK3 1724 aaKnown RBP21.51■■□□□ 1.03
PCDHB17P-201ENST00000539533 SLC39A6Q13433 755 aa21.51■■□□□ 1.03
PCDHB17P-201ENST00000539533 C8orf34Q49A92 452 aa21.51■■□□□ 1.03
PCDHB17P-201ENST00000539533 RWDD1Q9H446 243 aaPredicted RBP21.51■■□□□ 1.03
PCDHB17P-201ENST00000539533 ADAMTS2O95450 1211 aa21.5■■□□□ 1.03
PCDHB17P-201ENST00000539533 INTS3Q68E01 1043 aaKnown RBP21.5■■□□□ 1.03
PCDHB17P-201ENST00000539533 F6X3S4 739 aa21.5■■□□□ 1.03
PCDHB17P-201ENST00000539533 FLIIQ13045 1269 aa21.5■■□□□ 1.03
PCDHB17P-201ENST00000539533 COL14A1Q05707 1796 aaKnown RBP21.49■■□□□ 1.03
PCDHB17P-201ENST00000539533 HSP90AB1P08238 724 aaKnown RBP21.49■■□□□ 1.03
PCDHB17P-201ENST00000539533 HOXB7P09629 217 aa21.49■■□□□ 1.03
PCDHB17P-201ENST00000539533 PCDH11XQ9BZA7 1347 aa21.48■■□□□ 1.03
PCDHB17P-201ENST00000539533 PCDH11YQ9BZA8 1340 aa21.48■■□□□ 1.03
PCDHB17P-201ENST00000539533 C1orf115Q9H7X2 142 aa21.48■■□□□ 1.03
PCDHB17P-201ENST00000539533 PRAMEF22A3QJZ6 481 aa21.48■■□□□ 1.03
PCDHB17P-201ENST00000539533 GIGYF1O75420 1035 aaPredicted RBP21.48■■□□□ 1.03
PCDHB17P-201ENST00000539533 SLC4A3P48751 1232 aa21.48■■□□□ 1.03
PCDHB17P-201ENST00000539533 ZNF790Q6PG37 636 aa21.48■■□□□ 1.03
PCDHB17P-201ENST00000539533 HEG1Q9ULI3 1381 aa21.48■■□□□ 1.03
PCDHB17P-201ENST00000539533 DDX54Q8TDD1 881 aaKnown RBP21.47■■□□□ 1.03
PCDHB17P-201ENST00000539533 DAXXQ9UER7 740 aaPredicted RBP21.47■■□□□ 1.03
PCDHB17P-201ENST00000539533 FKBP5Q13451 457 aaPredicted RBP21.47■■□□□ 1.03
PCDHB17P-201ENST00000539533 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
PCDHB17P-201ENST00000539533 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
PCDHB17P-201ENST00000539533 NUTM2BA6NNL0 878 aaPredicted RBP21.46■■□□□ 1.03
PCDHB17P-201ENST00000539533 NUTM2EB1AL46 878 aaPredicted RBP21.46■■□□□ 1.03
PCDHB17P-201ENST00000539533 SLC4A10Q6U841 1118 aa21.46■■□□□ 1.03
PCDHB17P-201ENST00000539533 NUTM2AQ8IVF1 878 aaPredicted RBP21.46■■□□□ 1.03
PCDHB17P-201ENST00000539533 CHMP4BQ9H444 224 aaKnown RBP21.46■■□□□ 1.03
PCDHB17P-201ENST00000539533 CHPF2Q9P2E5 772 aa21.46■■□□□ 1.03
PCDHB17P-201ENST00000539533 RGS3P49796 1198 aa21.46■■□□□ 1.03
PCDHB17P-201ENST00000539533 NFKBIBQ15653 356 aa21.46■■□□□ 1.03
PCDHB17P-201ENST00000539533 HDAC1Q13547 482 aaPredicted RBP21.45■■□□□ 1.02
PCDHB17P-201ENST00000539533 CABP4P57796 275 aa21.45■■□□□ 1.02
PCDHB17P-201ENST00000539533 CACNA1FO60840 1977 aa21.45■■□□□ 1.02
PCDHB17P-201ENST00000539533 ANXA1P04083 346 aa21.44■■□□□ 1.02
PCDHB17P-201ENST00000539533 MRC1P22897 1456 aa21.43■■□□□ 1.02
PCDHB17P-201ENST00000539533 SHANK3Q9BYB0 1731 aa21.42■■□□□ 1.02
PCDHB17P-201ENST00000539533 NKX1-1Q15270 411 aaPredicted RBP21.42■■□□□ 1.02
PCDHB17P-201ENST00000539533 ZNF496Q96IT1 587 aaPredicted RBP21.41■■□□□ 1.02
PCDHB17P-201ENST00000539533 GSE1Q14687 1217 aa21.41■■□□□ 1.02
PCDHB17P-201ENST00000539533 CHMP4AQ9BY43 222 aa21.41■■□□□ 1.02
PCDHB17P-201ENST00000539533 PDZRN3Q9UPQ7 1066 aa21.41■■□□□ 1.02
PCDHB17P-201ENST00000539533 MEIS3Q99687 375 aa21.4■■□□□ 1.02
PCDHB17P-201ENST00000539533 CCT4P50991 539 aaKnown RBP21.4■■□□□ 1.02
PCDHB17P-201ENST00000539533 SIRT2Q8IXJ6 389 aa21.4■■□□□ 1.02
PCDHB17P-201ENST00000539533 DBF4Q9UBU7 674 aaPredicted RBP21.4■■□□□ 1.02
PCDHB17P-201ENST00000539533 BRPF3Q9ULD4 1205 aa21.4■■□□□ 1.02
PCDHB17P-201ENST00000539533 PROSER3Q2NL68 480 aa21.39■■□□□ 1.02
PCDHB17P-201ENST00000539533 TTC5Q8N0Z6 440 aa21.39■■□□□ 1.02
PCDHB17P-201ENST00000539533 PLCH1Q4KWH8 1693 aa21.38■■□□□ 1.01
PCDHB17P-201ENST00000539533 ERVV-2B6SEH9 535 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms