RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 GNAI1P63096 354 aa21.47■■□□□ 1.03
TRA2A-211ENST00000538367 OSBPL3Q9H4L5 887 aa21.47■■□□□ 1.03
TRA2A-211ENST00000538367 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
TRA2A-211ENST00000538367 ZNF771Q7L3S4 317 aaPredicted RBP21.46■■□□□ 1.03
TRA2A-211ENST00000538367 ZNF830Q96NB3 372 aaPredicted RBP21.46■■□□□ 1.03
TRA2A-211ENST00000538367 TUBGCP6Q96RT7 1819 aa21.46■■□□□ 1.03
TRA2A-211ENST00000538367 RPAP1Q9BWH6 1393 aaPredicted RBP21.45■■□□□ 1.02
TRA2A-211ENST00000538367 RIMS2Q9UQ26 1411 aa21.45■■□□□ 1.02
TRA2A-211ENST00000538367 SPDYE4A6NLX3 237 aa21.45■■□□□ 1.02
TRA2A-211ENST00000538367 PLPPR3Q6T4P5 718 aa21.45■■□□□ 1.02
TRA2A-211ENST00000538367 IPO4Q8TEX9 1081 aaKnown RBP21.45■■□□□ 1.02
TRA2A-211ENST00000538367 CTNNA3Q9UI47 895 aa21.44■■□□□ 1.02
TRA2A-211ENST00000538367 TRAK1Q9UPV9 953 aa21.44■■□□□ 1.02
TRA2A-211ENST00000538367 NEK4P51957 841 aa21.44■■□□□ 1.02
TRA2A-211ENST00000538367 UBE2HP62256 183 aa21.44■■□□□ 1.02
TRA2A-211ENST00000538367 USP48Q86UV5 1035 aa21.44■■□□□ 1.02
TRA2A-211ENST00000538367 DDX41Q9UJV9 622 aaKnown RBP21.44■■□□□ 1.02
TRA2A-211ENST00000538367 KIF20BQ96Q89 1820 aa21.43■■□□□ 1.02
TRA2A-211ENST00000538367 SMTNL1A8MU46 457 aa21.43■■□□□ 1.02
TRA2A-211ENST00000538367 MORC2Q9Y6X9 1032 aaPredicted RBP21.43■■□□□ 1.02
TRA2A-211ENST00000538367 A0A1W2PP64 1363 aa21.43■■□□□ 1.02
TRA2A-211ENST00000538367 NCBP1Q09161 790 aaKnown RBP21.43■■□□□ 1.02
TRA2A-211ENST00000538367 FUCA2Q9BTY2 467 aa21.43■■□□□ 1.02
TRA2A-211ENST00000538367 ZNF853P0CG23 659 aa21.42■■□□□ 1.02
TRA2A-211ENST00000538367 CHAMP1Q96JM3 812 aa21.41■■□□□ 1.02
TRA2A-211ENST00000538367 CPSF1Q10570 1443 aaKnown RBP21.41■■□□□ 1.02
TRA2A-211ENST00000538367 C17orf53Q8N3J3 647 aaPredicted RBP21.41■■□□□ 1.02
TRA2A-211ENST00000538367 KCNF1Q9H3M0 494 aa21.41■■□□□ 1.02
TRA2A-211ENST00000538367 GADD45BO75293 160 aaPredicted RBP21.4■■□□□ 1.02
TRA2A-211ENST00000538367 HCLS1P14317 486 aaPredicted RBP21.4■■□□□ 1.02
TRA2A-211ENST00000538367 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
TRA2A-211ENST00000538367 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.4■■□□□ 1.02
TRA2A-211ENST00000538367 PAXBP1Q9Y5B6 917 aa21.4■■□□□ 1.02
TRA2A-211ENST00000538367 HAP1P54257 671 aaPredicted RBP21.4■■□□□ 1.02
TRA2A-211ENST00000538367 NAP1L2Q9ULW6 460 aaPredicted RBP21.4■■□□□ 1.02
TRA2A-211ENST00000538367 SLFN14P0C7P3 912 aa21.38■■□□□ 1.01
TRA2A-211ENST00000538367 HDGFP51858 240 aaKnown RBP21.38■■□□□ 1.01
TRA2A-211ENST00000538367 PYCARDQ9ULZ3 195 aa21.38■■□□□ 1.01
TRA2A-211ENST00000538367 ATP6V1DQ9Y5K8 247 aa21.38■■□□□ 1.01
TRA2A-211ENST00000538367 TMEM2Q9UHN6 1383 aa21.38■■□□□ 1.01
TRA2A-211ENST00000538367 ALKQ9UM73 1620 aa21.37■■□□□ 1.01
TRA2A-211ENST00000538367 LMOD3Q0VAK6 560 aa21.37■■□□□ 1.01
TRA2A-211ENST00000538367 FOXD4L5Q5VV16 416 aaPredicted RBP21.37■■□□□ 1.01
TRA2A-211ENST00000538367 FOXD4L4Q8WXT5 416 aaPredicted RBP21.37■■□□□ 1.01
TRA2A-211ENST00000538367 FAM177BA6PVY3 158 aa21.37■■□□□ 1.01
TRA2A-211ENST00000538367 CEP85Q6P2H3 762 aa21.37■■□□□ 1.01
TRA2A-211ENST00000538367 CDK11BP21127 795 aaKnown RBP21.36■■□□□ 1.01
TRA2A-211ENST00000538367 TWISTNBQ3B726 338 aaPredicted RBP21.36■■□□□ 1.01
TRA2A-211ENST00000538367 C16orf71Q8IYS4 520 aaPredicted RBP21.36■■□□□ 1.01
TRA2A-211ENST00000538367 SETD1BQ9UPS6 1966 aaKnown RBP21.35■■□□□ 1.01
TRA2A-211ENST00000538367 TMEM132EQ6IEE7 984 aa21.35■■□□□ 1.01
TRA2A-211ENST00000538367 ESYT1Q9BSJ8 1104 aa21.35■■□□□ 1.01
TRA2A-211ENST00000538367 TSPYL1Q9H0U9 437 aa21.35■■□□□ 1.01
TRA2A-211ENST00000538367 TCHHQ07283 1943 aa21.34■■□□□ 1.01
TRA2A-211ENST00000538367 CEP170BQ9Y4F5 1589 aaPredicted RBP21.34■■□□□ 1.01
TRA2A-211ENST00000538367 TERF2Q15554 542 aa21.34■■□□□ 1.01
TRA2A-211ENST00000538367 KRT222Q8N1A0 295 aa21.34■■□□□ 1.01
TRA2A-211ENST00000538367 SETD1AO15047 1707 aaKnown RBP21.34■■□□□ 1.01
TRA2A-211ENST00000538367 HMMRO75330 724 aa21.34■■□□□ 1.01
TRA2A-211ENST00000538367 OTUD7AQ8TE49 926 aaPredicted RBP21.34■■□□□ 1.01
TRA2A-211ENST00000538367 TIGD1Q96MW7 591 aa21.34■■□□□ 1.01
TRA2A-211ENST00000538367 SRCIN1Q9C0H9 1055 aa21.34■■□□□ 1.01
TRA2A-211ENST00000538367 TERF2IPQ9NYB0 399 aa21.34■■□□□ 1.01
TRA2A-211ENST00000538367 CALCOCO1Q9P1Z2 691 aa21.34■■□□□ 1.01
TRA2A-211ENST00000538367 NRXN3Q9Y4C0 1643 aa21.33■■□□□ 1.01
TRA2A-211ENST00000538367 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.33■■□□□ 1.01
TRA2A-211ENST00000538367 TSPYL6Q8N831 410 aa21.33■■□□□ 1.01
TRA2A-211ENST00000538367 KIF18AQ8NI77 898 aa21.33■■□□□ 1.01
TRA2A-211ENST00000538367 DNAJC2Q99543 621 aaKnown RBP21.33■■□□□ 1.01
TRA2A-211ENST00000538367 SLIT1O75093 1534 aa21.32■■□□□ 1
TRA2A-211ENST00000538367 ZNF142P52746 1687 aaPredicted RBP21.32■■□□□ 1
TRA2A-211ENST00000538367 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
TRA2A-211ENST00000538367 MBIPQ9NS73 344 aa21.32■■□□□ 1
TRA2A-211ENST00000538367 FAM53CQ9NYF3 392 aa21.32■■□□□ 1
TRA2A-211ENST00000538367 CCDC192P0DO97 292 aa21.32■■□□□ 1
TRA2A-211ENST00000538367 ZSCAN22P10073 491 aaPredicted RBP21.32■■□□□ 1
TRA2A-211ENST00000538367 PRKAR2BP31323 418 aa21.32■■□□□ 1
TRA2A-211ENST00000538367 CD163L1Q9NR16 1453 aa21.32■■□□□ 1
TRA2A-211ENST00000538367 ZBTB7CA1YPR0 619 aa21.31■■□□□ 1
TRA2A-211ENST00000538367 FYB1O15117 783 aa21.31■■□□□ 1
TRA2A-211ENST00000538367 SLFNL1Q499Z3 407 aa21.31■■□□□ 1
TRA2A-211ENST00000538367 KIAA0232Q92628 1395 aa21.31■■□□□ 1
TRA2A-211ENST00000538367 SMARCA5O60264 1052 aaPredicted RBP21.31■■□□□ 1
TRA2A-211ENST00000538367 PDE1AP54750 535 aa21.31■■□□□ 1
TRA2A-211ENST00000538367 ZNF397Q8NF99 534 aaPredicted RBP21.31■■□□□ 1
TRA2A-211ENST00000538367 ARHGAP23Q9P227 1491 aa21.31■■□□□ 1
TRA2A-211ENST00000538367 PTPRMP28827 1452 aa21.3■■□□□ 1
TRA2A-211ENST00000538367 CDK12Q9NYV4 1490 aaPredicted RBP21.3■■□□□ 1
TRA2A-211ENST00000538367 THEMISQ8N1K5 641 aaPredicted RBP21.3■■□□□ 1
TRA2A-211ENST00000538367 GGNBP2Q9H3C7 697 aa21.3■■□□□ 1
TRA2A-211ENST00000538367 PTPRCP08575 1304 aa21.3■■□□□ 1
TRA2A-211ENST00000538367 MPNDQ8N594 471 aa21.29■■□□□ 1
TRA2A-211ENST00000538367 CCDC112Q8NEF3 446 aa21.29■■□□□ 1
TRA2A-211ENST00000538367 FAM200AQ8TCP9 573 aa21.29■■□□□ 1
TRA2A-211ENST00000538367 GDPD2Q9HCC8 539 aa21.29■■□□□ 1
TRA2A-211ENST00000538367 DLG5Q8TDM6 1919 aa21.29■■□□□ 1
TRA2A-211ENST00000538367 IRX5P78411 483 aaPredicted RBP21.28■■□□□ 1
TRA2A-211ENST00000538367 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.28■■□□□ 1
TRA2A-211ENST00000538367 PDIA4P13667 645 aaKnown RBP21.28■■□□□ 1
TRA2A-211ENST00000538367 SALL3Q9BXA9 1300 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms