RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
PRKDC-207ENST00000536483 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
PRKDC-207ENST00000536483 SSFA2P28290 1259 aa16.99■□□□□ 0.31
PRKDC-207ENST00000536483 ATP6V1AP38606 617 aa16.99■□□□□ 0.31
PRKDC-207ENST00000536483 ITPK1Q13572 414 aa16.99■□□□□ 0.31
PRKDC-207ENST00000536483 GNPATO15228 680 aa16.98■□□□□ 0.31
PRKDC-207ENST00000536483 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
PRKDC-207ENST00000536483 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
PRKDC-207ENST00000536483 WWC3Q9ULE0 1092 aa16.98■□□□□ 0.31
PRKDC-207ENST00000536483 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
PRKDC-207ENST00000536483 ATP10DQ9P241 1426 aa16.96■□□□□ 0.31
PRKDC-207ENST00000536483 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.3
PRKDC-207ENST00000536483 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
PRKDC-207ENST00000536483 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
PRKDC-207ENST00000536483 CEP350Q5VT06 3117 aa16.93■□□□□ 0.3
PRKDC-207ENST00000536483 MMP10P09238 476 aa16.92■□□□□ 0.3
PRKDC-207ENST00000536483 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
PRKDC-207ENST00000536483 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
PRKDC-207ENST00000536483 GPBP1L1Q9HC44 474 aaPredicted RBP16.92■□□□□ 0.3
PRKDC-207ENST00000536483 KDRP35968 1356 aa16.91■□□□□ 0.3
PRKDC-207ENST00000536483 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
PRKDC-207ENST00000536483 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
PRKDC-207ENST00000536483 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
PRKDC-207ENST00000536483 DCAF5Q96JK2 942 aa16.91■□□□□ 0.3
PRKDC-207ENST00000536483 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
PRKDC-207ENST00000536483 ADCY9O60503 1353 aa16.9■□□□□ 0.3
PRKDC-207ENST00000536483 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
PRKDC-207ENST00000536483 IL13P35225 146 aa16.89■□□□□ 0.29
PRKDC-207ENST00000536483 CABP4P57796 275 aa16.89■□□□□ 0.29
PRKDC-207ENST00000536483 AMOTQ4VCS5 1084 aa16.89■□□□□ 0.29
PRKDC-207ENST00000536483 ARHGEF1Q92888 912 aaKnown RBP16.89■□□□□ 0.29
PRKDC-207ENST00000536483 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
PRKDC-207ENST00000536483 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
PRKDC-207ENST00000536483 MTHFSP49914 203 aa16.87■□□□□ 0.29
PRKDC-207ENST00000536483 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
PRKDC-207ENST00000536483 NLGN1Q8N2Q7 840 aa16.87■□□□□ 0.29
PRKDC-207ENST00000536483 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
PRKDC-207ENST00000536483 ADRA2BP18089 450 aa16.86■□□□□ 0.29
PRKDC-207ENST00000536483 CNTNAP4Q9C0A0 1308 aa16.86■□□□□ 0.29
PRKDC-207ENST00000536483 A0A0G2JLW4 131 aa16.85■□□□□ 0.29
PRKDC-207ENST00000536483 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
PRKDC-207ENST00000536483 GYS1P13807 737 aa16.85■□□□□ 0.29
PRKDC-207ENST00000536483 RFC4P35249 363 aa16.85■□□□□ 0.29
PRKDC-207ENST00000536483 TGFB2P61812 414 aa16.85■□□□□ 0.29
PRKDC-207ENST00000536483 C1orf141Q5JVX7 400 aa16.85■□□□□ 0.29
PRKDC-207ENST00000536483 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
PRKDC-207ENST00000536483 PXDNLA1KZ92 1463 aa16.85■□□□□ 0.29
PRKDC-207ENST00000536483 CC2D1BQ5T0F9 858 aaKnown RBP16.84■□□□□ 0.29
PRKDC-207ENST00000536483 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
PRKDC-207ENST00000536483 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
PRKDC-207ENST00000536483 CICQ96RK0 1608 aaPredicted RBP16.84■□□□□ 0.29
PRKDC-207ENST00000536483 ZNF831Q5JPB2 1677 aa16.83■□□□□ 0.28
PRKDC-207ENST00000536483 CCDC87Q9NVE4 849 aa16.83■□□□□ 0.28
PRKDC-207ENST00000536483 PARP3Q9Y6F1 533 aa16.82■□□□□ 0.28
PRKDC-207ENST00000536483 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
PRKDC-207ENST00000536483 C10orf71Q711Q0 1435 aa16.81■□□□□ 0.28
PRKDC-207ENST00000536483 MYH14Q7Z406 1995 aaKnown RBP16.81■□□□□ 0.28
PRKDC-207ENST00000536483 DPEP1P16444 411 aa16.81■□□□□ 0.28
PRKDC-207ENST00000536483 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
PRKDC-207ENST00000536483 KIF13BQ9NQT8 1826 aa16.81■□□□□ 0.28
PRKDC-207ENST00000536483 N4BP2Q86UW6 1770 aaPredicted RBP16.8■□□□□ 0.28
PRKDC-207ENST00000536483 KIAA1551Q9HCM1 1747 aa16.8■□□□□ 0.28
PRKDC-207ENST00000536483 KIF3CO14782 793 aa16.8■□□□□ 0.28
PRKDC-207ENST00000536483 HSPA6P17066 643 aa16.8■□□□□ 0.28
PRKDC-207ENST00000536483 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
PRKDC-207ENST00000536483 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
PRKDC-207ENST00000536483 FCHSD2O94868 740 aa16.79■□□□□ 0.28
PRKDC-207ENST00000536483 ARHGAP27Q6ZUM4 889 aa16.79■□□□□ 0.28
PRKDC-207ENST00000536483 COL3A1P02461 1466 aaPredicted RBP16.79■□□□□ 0.28
PRKDC-207ENST00000536483 C4AP0C0L4 1744 aa16.79■□□□□ 0.28
PRKDC-207ENST00000536483 FKBP8Q14318 412 aa16.78■□□□□ 0.28
PRKDC-207ENST00000536483 KCNA3P22001 575 aa16.77■□□□□ 0.28
PRKDC-207ENST00000536483 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.28
PRKDC-207ENST00000536483 INTS5Q6P9B9 1019 aaKnown RBP16.77■□□□□ 0.28
PRKDC-207ENST00000536483 USP42Q9H9J4 1324 aaKnown RBP16.76■□□□□ 0.27
PRKDC-207ENST00000536483 DDR1Q08345 913 aa16.76■□□□□ 0.27
PRKDC-207ENST00000536483 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
PRKDC-207ENST00000536483 HMOX1P09601 288 aa16.75■□□□□ 0.27
PRKDC-207ENST00000536483 DNAJC10Q8IXB1 793 aa16.75■□□□□ 0.27
PRKDC-207ENST00000536483 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
PRKDC-207ENST00000536483 TJP1Q07157 1748 aa16.74■□□□□ 0.27
PRKDC-207ENST00000536483 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
PRKDC-207ENST00000536483 RNMTO43148 476 aaKnown RBP16.73■□□□□ 0.27
PRKDC-207ENST00000536483 PPP2R1AP30153 589 aa16.73■□□□□ 0.27
PRKDC-207ENST00000536483 SLC39A6Q13433 755 aa16.73■□□□□ 0.27
PRKDC-207ENST00000536483 SCN11AQ9UI33 1791 aa16.73■□□□□ 0.27
PRKDC-207ENST00000536483 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
PRKDC-207ENST00000536483 ZPR1O75312 459 aa16.72■□□□□ 0.27
PRKDC-207ENST00000536483 TM4SF1P30408 202 aa16.72■□□□□ 0.27
PRKDC-207ENST00000536483 CHRNA5P30532 468 aa16.72■□□□□ 0.27
PRKDC-207ENST00000536483 DALRD3Q5D0E6 543 aaKnown RBP16.72■□□□□ 0.27
PRKDC-207ENST00000536483 C9orf131Q5VYM1 1079 aa16.72■□□□□ 0.27
PRKDC-207ENST00000536483 USPL1Q5W0Q7 1092 aa16.72■□□□□ 0.27
PRKDC-207ENST00000536483 NMRK2Q9NPI5 230 aa16.72■□□□□ 0.27
PRKDC-207ENST00000536483 BRCA1P38398 1863 aaKnown RBP16.71■□□□□ 0.27
PRKDC-207ENST00000536483 TOMM70O94826 608 aa16.71■□□□□ 0.27
PRKDC-207ENST00000536483 CYP19A1P11511 503 aaPredicted RBP16.71■□□□□ 0.27
PRKDC-207ENST00000536483 MTHFSDQ2M296 383 aaKnown RBP16.71■□□□□ 0.27
PRKDC-207ENST00000536483 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
PRKDC-207ENST00000536483 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms