RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 BTBD11A6QL63 1104 aa14.97□□□□□ -0.01
CDCA3-206ENST00000536241 TSPYL4Q9UJ04 414 aa14.97□□□□□ -0.01
CDCA3-206ENST00000536241 LRRC37A3O60309 1634 aa14.97□□□□□ -0.01
CDCA3-206ENST00000536241 FANCIQ9NVI1 1328 aa14.96□□□□□ -0.01
CDCA3-206ENST00000536241 ACSBG1Q96GR2 724 aa14.96□□□□□ -0.01
CDCA3-206ENST00000536241 THSD7AQ9UPZ6 1657 aa14.96□□□□□ -0.01
CDCA3-206ENST00000536241 SCN11AQ9UI33 1791 aa14.96□□□□□ -0.01
CDCA3-206ENST00000536241 KCNQ3O43525 872 aa14.95□□□□□ -0.02
CDCA3-206ENST00000536241 PRIM1P49642 420 aaKnown RBP14.95□□□□□ -0.02
CDCA3-206ENST00000536241 EXOSC9Q06265 439 aaKnown RBP14.95□□□□□ -0.02
CDCA3-206ENST00000536241 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
CDCA3-206ENST00000536241 BABAM1Q9NWV8 329 aa14.95□□□□□ -0.02
CDCA3-206ENST00000536241 VIRMAQ69YN4 1812 aaKnown RBP14.95□□□□□ -0.02
CDCA3-206ENST00000536241 SLC39A6Q13433 755 aa14.95□□□□□ -0.02
CDCA3-206ENST00000536241 KRT27Q7Z3Y8 459 aa14.95□□□□□ -0.02
CDCA3-206ENST00000536241 PIGBQ92521 554 aa14.94□□□□□ -0.02
CDCA3-206ENST00000536241 TMOD3Q9NYL9 352 aa14.94□□□□□ -0.02
CDCA3-206ENST00000536241 ADAMTS7Q9UKP4 1686 aa14.94□□□□□ -0.02
CDCA3-206ENST00000536241 ELL2O00472 640 aaPredicted RBP14.93□□□□□ -0.02
CDCA3-206ENST00000536241 KCNQ2O43526 872 aa14.93□□□□□ -0.02
CDCA3-206ENST00000536241 C8orf58Q8NAV2 365 aa14.93□□□□□ -0.02
CDCA3-206ENST00000536241 KRT24Q2M2I5 525 aa14.92□□□□□ -0.02
CDCA3-206ENST00000536241 ZNF790Q6PG37 636 aa14.92□□□□□ -0.02
CDCA3-206ENST00000536241 TSPYL6Q8N831 410 aa14.92□□□□□ -0.02
CDCA3-206ENST00000536241 EIF4A1P60842 406 aaKnown RBP14.91□□□□□ -0.02
CDCA3-206ENST00000536241 BRWD3Q6RI45 1802 aa14.9□□□□□ -0.02
CDCA3-206ENST00000536241 VAMP4O75379 141 aa14.89□□□□□ -0.03
CDCA3-206ENST00000536241 FAM196AQ6ZSG2 479 aa14.89□□□□□ -0.03
CDCA3-206ENST00000536241 PTF1AQ7RTS3 328 aa14.89□□□□□ -0.03
CDCA3-206ENST00000536241 TTC5Q8N0Z6 440 aa14.89□□□□□ -0.03
CDCA3-206ENST00000536241 ATG3Q9NT62 314 aa14.89□□□□□ -0.03
CDCA3-206ENST00000536241 ASAP1Q9ULH1 1129 aa14.89□□□□□ -0.03
CDCA3-206ENST00000536241 SIPA1L3O60292 1781 aaPredicted RBP14.89□□□□□ -0.03
CDCA3-206ENST00000536241 TOGARAM1Q9Y4F4 1720 aa14.89□□□□□ -0.03
CDCA3-206ENST00000536241 TWISTNBQ3B726 338 aaPredicted RBP14.89□□□□□ -0.03
CDCA3-206ENST00000536241 MRC1P22897 1456 aa14.88□□□□□ -0.03
CDCA3-206ENST00000536241 BCL9O00512 1426 aa14.88□□□□□ -0.03
CDCA3-206ENST00000536241 RGS12O14924 1447 aa14.88□□□□□ -0.03
CDCA3-206ENST00000536241 ITGB4P16144 1822 aa14.88□□□□□ -0.03
CDCA3-206ENST00000536241 ZNF496Q96IT1 587 aaPredicted RBP14.88□□□□□ -0.03
CDCA3-206ENST00000536241 PTCD1O75127 700 aaKnown RBP14.87□□□□□ -0.03
CDCA3-206ENST00000536241 RCAN3Q9UKA8 241 aa14.87□□□□□ -0.03
CDCA3-206ENST00000536241 GIGYF1O75420 1035 aaPredicted RBP14.86□□□□□ -0.03
CDCA3-206ENST00000536241 CT47B1P0C2W7 299 aaPredicted RBP14.86□□□□□ -0.03
CDCA3-206ENST00000536241 FMNL2Q96PY5 1086 aa14.86□□□□□ -0.03
CDCA3-206ENST00000536241 PRAMEF22A3QJZ6 481 aa14.85□□□□□ -0.03
CDCA3-206ENST00000536241 TRIM37O94972 964 aa14.85□□□□□ -0.03
CDCA3-206ENST00000536241 DOT1LQ8TEK3 1739 aa14.85□□□□□ -0.03
CDCA3-206ENST00000536241 TCERG1O14776 1098 aaKnown RBP14.84□□□□□ -0.03
CDCA3-206ENST00000536241 RARSP54136 660 aaKnown RBP14.84□□□□□ -0.03
CDCA3-206ENST00000536241 NECTIN2Q92692 538 aa14.84□□□□□ -0.03
CDCA3-206ENST00000536241 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
CDCA3-206ENST00000536241 SUPT16HQ9Y5B9 1047 aaKnown RBP14.84□□□□□ -0.03
CDCA3-206ENST00000536241 KDM3BQ7LBC6 1761 aa14.84□□□□□ -0.03
CDCA3-206ENST00000536241 HEG1Q9ULI3 1381 aa14.84□□□□□ -0.03
CDCA3-206ENST00000536241 BCAR3O75815 825 aa14.83□□□□□ -0.03
CDCA3-206ENST00000536241 SNRPA1P09661 255 aaKnown RBP14.83□□□□□ -0.03
CDCA3-206ENST00000536241 EIF2S2P20042 333 aaKnown RBP14.83□□□□□ -0.03
CDCA3-206ENST00000536241 BCL11BQ9C0K0 894 aaPredicted RBP14.83□□□□□ -0.03
CDCA3-206ENST00000536241 USP16Q9Y5T5 823 aa14.83□□□□□ -0.03
CDCA3-206ENST00000536241 BCL2L13Q9BXK5 485 aa14.82□□□□□ -0.04
CDCA3-206ENST00000536241 SSH1Q8WYL5 1049 aa14.82□□□□□ -0.04
CDCA3-206ENST00000536241 SMARCC1Q92922 1105 aaPredicted RBP14.82□□□□□ -0.04
CDCA3-206ENST00000536241 SLC4A9Q96Q91 983 aa14.82□□□□□ -0.04
CDCA3-206ENST00000536241 SBF2Q86WG5 1849 aa14.81□□□□□ -0.04
CDCA3-206ENST00000536241 HOXB7P09629 217 aa14.81□□□□□ -0.04
CDCA3-206ENST00000536241 ZNF428Q96B54 188 aa14.81□□□□□ -0.04
CDCA3-206ENST00000536241 ALDH1L2Q3SY69 923 aa14.8□□□□□ -0.04
CDCA3-206ENST00000536241 HDGFL1Q5TGJ6 251 aa14.8□□□□□ -0.04
CDCA3-206ENST00000536241 CCDC30Q5VVM6 783 aa14.8□□□□□ -0.04
CDCA3-206ENST00000536241 SOS1Q07889 1333 aaPredicted RBP14.8□□□□□ -0.04
CDCA3-206ENST00000536241 LOC102724428A0A0B4J2F2 783 aa14.79□□□□□ -0.04
CDCA3-206ENST00000536241 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
CDCA3-206ENST00000536241 ATP6V1AP38606 617 aa14.79□□□□□ -0.04
CDCA3-206ENST00000536241 SIK1P57059 783 aa14.79□□□□□ -0.04
CDCA3-206ENST00000536241 DNAJC10Q8IXB1 793 aa14.79□□□□□ -0.04
CDCA3-206ENST00000536241 VSIG10Q8N0Z9 540 aa14.79□□□□□ -0.04
CDCA3-206ENST00000536241 MRPL50Q8N5N7 158 aaKnown RBP14.79□□□□□ -0.04
CDCA3-206ENST00000536241 SMC4Q9NTJ3 1288 aa14.79□□□□□ -0.04
CDCA3-206ENST00000536241 PALLDQ8WX93 1383 aa14.79□□□□□ -0.04
CDCA3-206ENST00000536241 KCPQ6ZWJ8 1503 aa14.79□□□□□ -0.04
CDCA3-206ENST00000536241 KCNQ4P56696 695 aa14.78□□□□□ -0.04
CDCA3-206ENST00000536241 PLIN1O60240 522 aa14.77□□□□□ -0.04
CDCA3-206ENST00000536241 TEX13AQ9BXU3 409 aaPredicted RBP14.77□□□□□ -0.04
CDCA3-206ENST00000536241 CHMP4AQ9BY43 222 aa14.77□□□□□ -0.04
CDCA3-206ENST00000536241 PAPPAQ13219 1627 aa14.77□□□□□ -0.04
CDCA3-206ENST00000536241 NHSQ6T4R5 1651 aa14.77□□□□□ -0.04
CDCA3-206ENST00000536241 BTAF1O14981 1849 aa14.77□□□□□ -0.05
CDCA3-206ENST00000536241 UBR2Q8IWV8 1755 aa14.77□□□□□ -0.05
CDCA3-206ENST00000536241 APBA3O96018 575 aa14.76□□□□□ -0.05
CDCA3-206ENST00000536241 FRAT1Q92837 279 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-206ENST00000536241 STK31Q9BXU1 1019 aa14.76□□□□□ -0.05
CDCA3-206ENST00000536241 CHPF2Q9P2E5 772 aa14.76□□□□□ -0.05
CDCA3-206ENST00000536241 NOB1Q9ULX3 412 aaKnown RBP14.76□□□□□ -0.05
CDCA3-206ENST00000536241 ANXA1P04083 346 aa14.76□□□□□ -0.05
CDCA3-206ENST00000536241 A1BGP04217 495 aa14.76□□□□□ -0.05
CDCA3-206ENST00000536241 PIP4K2AP48426 406 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-206ENST00000536241 ITPK1Q13572 414 aa14.76□□□□□ -0.05
CDCA3-206ENST00000536241 PDIA6Q15084 440 aa14.76□□□□□ -0.05
CDCA3-206ENST00000536241 STARD3NLO95772 234 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms