RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
TMEM258-202ENST00000535042 ATG3Q9NT62 314 aa17.33■□□□□ 0.36
TMEM258-202ENST00000535042 ASAP1Q9ULH1 1129 aa17.33■□□□□ 0.36
TMEM258-202ENST00000535042 MRC1P22897 1456 aa17.32■□□□□ 0.36
TMEM258-202ENST00000535042 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
TMEM258-202ENST00000535042 ITGB4P16144 1822 aa17.32■□□□□ 0.36
TMEM258-202ENST00000535042 SCN11AQ9UI33 1791 aa17.32■□□□□ 0.36
TMEM258-202ENST00000535042 KAT6BQ8WYB5 2073 aa17.3■□□□□ 0.36
TMEM258-202ENST00000535042 TEFQ10587 303 aa17.3■□□□□ 0.36
TMEM258-202ENST00000535042 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
TMEM258-202ENST00000535042 PALLDQ8WX93 1383 aa17.29■□□□□ 0.36
TMEM258-202ENST00000535042 KCNQ4P56696 695 aa17.29■□□□□ 0.36
TMEM258-202ENST00000535042 SLC39A6Q13433 755 aa17.29■□□□□ 0.36
TMEM258-202ENST00000535042 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
TMEM258-202ENST00000535042 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
TMEM258-202ENST00000535042 LRRC4BQ9NT99 713 aa17.28■□□□□ 0.36
TMEM258-202ENST00000535042 KCNQ3O43525 872 aa17.26■□□□□ 0.35
TMEM258-202ENST00000535042 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
TMEM258-202ENST00000535042 SLC4A9Q96Q91 983 aa17.26■□□□□ 0.35
TMEM258-202ENST00000535042 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
TMEM258-202ENST00000535042 MIS18AQ9NYP9 233 aa17.25■□□□□ 0.35
TMEM258-202ENST00000535042 CCNL1Q9UK58 526 aaPredicted RBP17.25■□□□□ 0.35
TMEM258-202ENST00000535042 VIRMAQ69YN4 1812 aaKnown RBP17.24■□□□□ 0.35
TMEM258-202ENST00000535042 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
TMEM258-202ENST00000535042 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
TMEM258-202ENST00000535042 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
TMEM258-202ENST00000535042 SIK1P57059 783 aa17.24■□□□□ 0.35
TMEM258-202ENST00000535042 SLC27A3Q5K4L6 730 aa17.24■□□□□ 0.35
TMEM258-202ENST00000535042 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
TMEM258-202ENST00000535042 SALL2Q9Y467 1007 aaPredicted RBP17.24■□□□□ 0.35
TMEM258-202ENST00000535042 RGPD3A6NKT7 1758 aaPredicted RBP17.24■□□□□ 0.35
TMEM258-202ENST00000535042 RGPD4Q7Z3J3 1758 aa17.24■□□□□ 0.35
TMEM258-202ENST00000535042 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
TMEM258-202ENST00000535042 ITPK1Q13572 414 aa17.23■□□□□ 0.35
TMEM258-202ENST00000535042 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
TMEM258-202ENST00000535042 LY75O60449 1722 aa17.23■□□□□ 0.35
TMEM258-202ENST00000535042 RREB1Q92766 1687 aa17.23■□□□□ 0.35
TMEM258-202ENST00000535042 CCDC27Q2M243 656 aa17.22■□□□□ 0.35
TMEM258-202ENST00000535042 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.35
TMEM258-202ENST00000535042 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
TMEM258-202ENST00000535042 ATP6V1AP38606 617 aa17.21■□□□□ 0.35
TMEM258-202ENST00000535042 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
TMEM258-202ENST00000535042 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
TMEM258-202ENST00000535042 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
TMEM258-202ENST00000535042 ANO8Q9HCE9 1232 aaPredicted RBP17.21■□□□□ 0.35
TMEM258-202ENST00000535042 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
TMEM258-202ENST00000535042 NUP188Q5SRE5 1749 aa17.2■□□□□ 0.34
TMEM258-202ENST00000535042 LINC00116Q8NCU8 138 aa17.19■□□□□ 0.34
TMEM258-202ENST00000535042 CHL1O00533 1208 aa17.18■□□□□ 0.34
TMEM258-202ENST00000535042 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
TMEM258-202ENST00000535042 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
TMEM258-202ENST00000535042 LAS1LQ9Y4W2 734 aaKnown RBP17.18■□□□□ 0.34
TMEM258-202ENST00000535042 ZNF853P0CG23 659 aa17.17■□□□□ 0.34
TMEM258-202ENST00000535042 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
TMEM258-202ENST00000535042 FMNL2Q96PY5 1086 aa17.17■□□□□ 0.34
TMEM258-202ENST00000535042 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
TMEM258-202ENST00000535042 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
TMEM258-202ENST00000535042 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
TMEM258-202ENST00000535042 EIF4A1P60842 406 aaKnown RBP17.16■□□□□ 0.34
TMEM258-202ENST00000535042 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
TMEM258-202ENST00000535042 CFAP44Q96MT7 982 aa17.16■□□□□ 0.34
TMEM258-202ENST00000535042 BABAM1Q9NWV8 329 aa17.16■□□□□ 0.34
TMEM258-202ENST00000535042 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
TMEM258-202ENST00000535042 SLC15A2Q16348 729 aa17.15■□□□□ 0.34
TMEM258-202ENST00000535042 VSIG10Q8N0Z9 540 aa17.15■□□□□ 0.34
TMEM258-202ENST00000535042 NGEFQ8N5V2 710 aa17.15■□□□□ 0.34
TMEM258-202ENST00000535042 ZNF521Q96K83 1311 aa17.15■□□□□ 0.34
TMEM258-202ENST00000535042 PSDA5PKW4 1024 aaPredicted RBP17.14■□□□□ 0.33
TMEM258-202ENST00000535042 CALD1Q05682 793 aaKnown RBP17.14■□□□□ 0.33
TMEM258-202ENST00000535042 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
TMEM258-202ENST00000535042 MBIPQ9NS73 344 aa17.14■□□□□ 0.33
TMEM258-202ENST00000535042 IFT57Q9NWB7 429 aa17.14■□□□□ 0.33
TMEM258-202ENST00000535042 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
TMEM258-202ENST00000535042 KDM3BQ7LBC6 1761 aa17.14■□□□□ 0.33
TMEM258-202ENST00000535042 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
TMEM258-202ENST00000535042 TJP1Q07157 1748 aa17.13■□□□□ 0.33
TMEM258-202ENST00000535042 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
TMEM258-202ENST00000535042 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
TMEM258-202ENST00000535042 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
TMEM258-202ENST00000535042 AMIGO3Q86WK7 504 aa17.13■□□□□ 0.33
TMEM258-202ENST00000535042 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
TMEM258-202ENST00000535042 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
TMEM258-202ENST00000535042 USP16Q9Y5T5 823 aa17.13■□□□□ 0.33
TMEM258-202ENST00000535042 GNAI1P63096 354 aa17.12■□□□□ 0.33
TMEM258-202ENST00000535042 C5P01031 1676 aa17.12■□□□□ 0.33
TMEM258-202ENST00000535042 IL16Q14005 1332 aa17.12■□□□□ 0.33
TMEM258-202ENST00000535042 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
TMEM258-202ENST00000535042 GIGYF1O75420 1035 aaPredicted RBP17.11■□□□□ 0.33
TMEM258-202ENST00000535042 SNRPA1P09661 255 aaKnown RBP17.11■□□□□ 0.33
TMEM258-202ENST00000535042 CRKLP46109 303 aaKnown RBP17.11■□□□□ 0.33
TMEM258-202ENST00000535042 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
TMEM258-202ENST00000535042 PDGFDQ9GZP0 370 aaPredicted RBP17.11■□□□□ 0.33
TMEM258-202ENST00000535042 TAF1LQ8IZX4 1826 aa17.11■□□□□ 0.33
TMEM258-202ENST00000535042 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
TMEM258-202ENST00000535042 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
TMEM258-202ENST00000535042 RC3H1Q5TC82 1133 aaKnown RBP17.1■□□□□ 0.33
TMEM258-202ENST00000535042 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
TMEM258-202ENST00000535042 AK7Q96M32 723 aa17.1■□□□□ 0.33
TMEM258-202ENST00000535042 TFCP2L1Q9NZI6 479 aa17.1■□□□□ 0.33
TMEM258-202ENST00000535042 GNPATO15228 680 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms