RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 GPR25O00155 361 aa9.11□□□□□ -0.95
TNFRSF1A-206ENST00000535038 DBN1Q16643 649 aa9.11□□□□□ -0.95
TNFRSF1A-206ENST00000535038 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-206ENST00000535038 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
TNFRSF1A-206ENST00000535038 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
TNFRSF1A-206ENST00000535038 CFTRP13569 1480 aa9.1□□□□□ -0.95
TNFRSF1A-206ENST00000535038 SPATA31C2B4DYI2 1134 aa9.1□□□□□ -0.95
TNFRSF1A-206ENST00000535038 RAB6BQ9NRW1 208 aa9.1□□□□□ -0.95
TNFRSF1A-206ENST00000535038 ERICH3Q5RHP9 1530 aa9.1□□□□□ -0.95
TNFRSF1A-206ENST00000535038 GNRH1P01148 92 aa9.09□□□□□ -0.95
TNFRSF1A-206ENST00000535038 CELA2BP08218 269 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-206ENST00000535038 IRS1P35568 1242 aa9.09□□□□□ -0.95
TNFRSF1A-206ENST00000535038 WDR44Q5JSH3 913 aa9.09□□□□□ -0.95
TNFRSF1A-206ENST00000535038 TAS1R3Q7RTX0 852 aa9.09□□□□□ -0.95
TNFRSF1A-206ENST00000535038 GTPBP3Q969Y2 492 aaKnown RBP9.09□□□□□ -0.95
TNFRSF1A-206ENST00000535038 CEP126Q9P2H0 1117 aa9.09□□□□□ -0.95
TNFRSF1A-206ENST00000535038 CUX1P39880 1505 aa9.09□□□□□ -0.95
TNFRSF1A-206ENST00000535038 PRXQ9BXM0 1461 aa9.08□□□□□ -0.96
TNFRSF1A-206ENST00000535038 WASLO00401 505 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-206ENST00000535038 MYCP01106 439 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-206ENST00000535038 CNKSR1Q969H4 720 aa9.08□□□□□ -0.96
TNFRSF1A-206ENST00000535038 SCARF2Q96GP6 870 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-206ENST00000535038 TRERF1Q96PN7 1200 aa9.08□□□□□ -0.96
TNFRSF1A-206ENST00000535038 TIMMDC1Q9NPL8 285 aa9.08□□□□□ -0.96
TNFRSF1A-206ENST00000535038 ENAMQ9NRM1 1142 aa9.08□□□□□ -0.96
TNFRSF1A-206ENST00000535038 IGF1RP08069 1367 aa9.08□□□□□ -0.96
TNFRSF1A-206ENST00000535038 CCDC85AQ96PX6 553 aaPredicted RBP9.07□□□□□ -0.96
TNFRSF1A-206ENST00000535038 ESYT1Q9BSJ8 1104 aa9.07□□□□□ -0.96
TNFRSF1A-206ENST00000535038 RAPGEF2Q9Y4G8 1499 aa9.07□□□□□ -0.96
TNFRSF1A-206ENST00000535038 KANK3Q6NY19 840 aa9.06□□□□□ -0.96
TNFRSF1A-206ENST00000535038 CDCA7Q9BWT1 371 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF1A-206ENST00000535038 PRM3Q9NNZ6 103 aa9.06□□□□□ -0.96
TNFRSF1A-206ENST00000535038 TBC1D2BQ9UPU7 963 aa9.06□□□□□ -0.96
TNFRSF1A-206ENST00000535038 IL2RAP01589 272 aa9.05□□□□□ -0.96
TNFRSF1A-206ENST00000535038 F11P03951 625 aa9.05□□□□□ -0.96
TNFRSF1A-206ENST00000535038 CENPCQ03188 943 aa9.05□□□□□ -0.96
TNFRSF1A-206ENST00000535038 NUCKS1Q9H1E3 243 aaKnown RBP9.05□□□□□ -0.96
TNFRSF1A-206ENST00000535038 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
TNFRSF1A-206ENST00000535038 EIF4G2P78344 907 aaKnown RBP eCLIP9.04□□□□□ -0.96
TNFRSF1A-206ENST00000535038 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
TNFRSF1A-206ENST00000535038 ZSCAN10Q96SZ4 725 aaPredicted RBP9.04□□□□□ -0.96
TNFRSF1A-206ENST00000535038 DNMT3AQ9Y6K1 912 aaPredicted RBP9.04□□□□□ -0.96
TNFRSF1A-206ENST00000535038 CLIP1P30622 1438 aa9.04□□□□□ -0.96
TNFRSF1A-206ENST00000535038 MX2P20592 715 aa9.03□□□□□ -0.96
TNFRSF1A-206ENST00000535038 GTF2E1P29083 439 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-206ENST00000535038 NSFL1CQ9UNZ2 370 aaKnown RBP9.03□□□□□ -0.96
TNFRSF1A-206ENST00000535038 BCRP11274 1271 aa9.02□□□□□ -0.97
TNFRSF1A-206ENST00000535038 GPAMQ9HCL2 828 aa9.02□□□□□ -0.97
TNFRSF1A-206ENST00000535038 DOLKQ9UPQ8 538 aa9.02□□□□□ -0.97
TNFRSF1A-206ENST00000535038 A0A1B0GTH6 734 aa9.01□□□□□ -0.97
TNFRSF1A-206ENST00000535038 PHKA2P46019 1235 aa9.01□□□□□ -0.97
TNFRSF1A-206ENST00000535038 SLFNL1Q499Z3 407 aa9.01□□□□□ -0.97
TNFRSF1A-206ENST00000535038 ESCO1Q5FWF5 840 aa9.01□□□□□ -0.97
TNFRSF1A-206ENST00000535038 GNASQ5JWF2 1037 aa9.01□□□□□ -0.97
TNFRSF1A-206ENST00000535038 TMEM214Q6NUQ4 689 aaKnown RBP9.01□□□□□ -0.97
TNFRSF1A-206ENST00000535038 ACDQ96AP0 544 aa9.01□□□□□ -0.97
TNFRSF1A-206ENST00000535038 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
TNFRSF1A-206ENST00000535038 HRH3Q9Y5N1 445 aa9.01□□□□□ -0.97
TNFRSF1A-206ENST00000535038 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
TNFRSF1A-206ENST00000535038 USP4Q13107 963 aa9□□□□□ -0.97
TNFRSF1A-206ENST00000535038 SUZ12Q15022 739 aaKnown RBP9□□□□□ -0.97
TNFRSF1A-206ENST00000535038 GPAT2Q6NUI2 795 aa9□□□□□ -0.97
TNFRSF1A-206ENST00000535038 RNF135Q8IUD6 432 aa9□□□□□ -0.97
TNFRSF1A-206ENST00000535038 NEDD1Q8NHV4 660 aa9□□□□□ -0.97
TNFRSF1A-206ENST00000535038 FHDC1Q9C0D6 1143 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-206ENST00000535038 PHF20L1A8MW92 1017 aa8.99□□□□□ -0.97
TNFRSF1A-206ENST00000535038 IRF5Q13568 498 aa8.99□□□□□ -0.97
TNFRSF1A-206ENST00000535038 TSGA10IPQ3SY00 556 aa8.99□□□□□ -0.97
TNFRSF1A-206ENST00000535038 PHTF2Q8N3S3 785 aa8.99□□□□□ -0.97
TNFRSF1A-206ENST00000535038 ARAP1Q96P48 1450 aa8.99□□□□□ -0.97
TNFRSF1A-206ENST00000535038 THBS1P07996 1170 aa8.98□□□□□ -0.97
TNFRSF1A-206ENST00000535038 FOXK2Q01167 660 aa8.98□□□□□ -0.97
TNFRSF1A-206ENST00000535038 OXLD1Q5BKU9 147 aa8.98□□□□□ -0.97
TNFRSF1A-206ENST00000535038 PODNQ7Z5L7 613 aa8.98□□□□□ -0.97
TNFRSF1A-206ENST00000535038 CFHR5Q9BXR6 569 aa8.98□□□□□ -0.97
TNFRSF1A-206ENST00000535038 LRRC4BQ9NT99 713 aa8.98□□□□□ -0.97
TNFRSF1A-206ENST00000535038 IGHA1P01876 353 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 CSB-PGBD3P0DP91 1061 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 MAP2K3P46734 347 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 C4orf17Q53FE4 359 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 PGBD3Q8N328 593 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 BEND7Q8N7W2 519 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 SIRT1Q96EB6 747 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 ETNK1Q9HBU6 452 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 PHF24Q9UPV7 400 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 CNTNAP5Q8WYK1 1306 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 KIF27Q86VH2 1401 aa8.97□□□□□ -0.97
TNFRSF1A-206ENST00000535038 VAC14Q08AM6 782 aa8.96□□□□□ -0.98
TNFRSF1A-206ENST00000535038 LBRQ14739 615 aaKnown RBP8.96□□□□□ -0.98
TNFRSF1A-206ENST00000535038 TLR1Q15399 786 aa8.96□□□□□ -0.98
TNFRSF1A-206ENST00000535038 LOC100996750A0A140TA64 210 aa8.95□□□□□ -0.98
TNFRSF1A-206ENST00000535038 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-206ENST00000535038 RHBDD1Q8TEB9 315 aa8.95□□□□□ -0.98
TNFRSF1A-206ENST00000535038 OXCT2Q9BYC2 517 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-206ENST00000535038 KRTAP4-6Q9BYQ5 205 aa8.95□□□□□ -0.98
TNFRSF1A-206ENST00000535038 RUBCNLQ9H714 662 aa8.95□□□□□ -0.98
TNFRSF1A-206ENST00000535038 GDPD2Q9HCC8 539 aa8.95□□□□□ -0.98
TNFRSF1A-206ENST00000535038 CADPSQ9ULU8 1353 aa8.95□□□□□ -0.98
TNFRSF1A-206ENST00000535038 OIP5O43482 229 aa8.94□□□□□ -0.98
TNFRSF1A-206ENST00000535038 MSX1P28360 303 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms