RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 KDM6AO15550 1401 aaPredicted RBP14.03□□□□□ -0.16
CSDE1-217ENST00000534699 TNNT2P45379 298 aaPredicted RBP14.03□□□□□ -0.16
CSDE1-217ENST00000534699 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
CSDE1-217ENST00000534699 SULT6B1Q6IMI4 303 aa14.02□□□□□ -0.16
CSDE1-217ENST00000534699 SYT17Q9BSW7 474 aa14.02□□□□□ -0.16
CSDE1-217ENST00000534699 ATG3Q9NT62 314 aa14.02□□□□□ -0.16
CSDE1-217ENST00000534699 CD2APQ9Y5K6 639 aa14.02□□□□□ -0.16
CSDE1-217ENST00000534699 CABP4P57796 275 aa14.02□□□□□ -0.17
CSDE1-217ENST00000534699 COL23A1Q86Y22 540 aaPredicted RBP14.01□□□□□ -0.17
CSDE1-217ENST00000534699 KIF13BQ9NQT8 1826 aa14.01□□□□□ -0.17
CSDE1-217ENST00000534699 UBR2Q8IWV8 1755 aa14□□□□□ -0.17
CSDE1-217ENST00000534699 GAS2L2Q8NHY3 880 aa14□□□□□ -0.17
CSDE1-217ENST00000534699 FHDC1Q9C0D6 1143 aaPredicted RBP14□□□□□ -0.17
CSDE1-217ENST00000534699 NUDCQ9Y266 331 aa14□□□□□ -0.17
CSDE1-217ENST00000534699 TJP1Q07157 1748 aa14□□□□□ -0.17
CSDE1-217ENST00000534699 VSIG10Q8N0Z9 540 aa13.99□□□□□ -0.17
CSDE1-217ENST00000534699 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
CSDE1-217ENST00000534699 PDGFDQ9GZP0 370 aaPredicted RBP13.99□□□□□ -0.17
CSDE1-217ENST00000534699 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
CSDE1-217ENST00000534699 RPS6KA4O75676 772 aa13.98□□□□□ -0.17
CSDE1-217ENST00000534699 GRIN3BO60391 1043 aa13.97□□□□□ -0.17
CSDE1-217ENST00000534699 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
CSDE1-217ENST00000534699 ASAP1Q9ULH1 1129 aa13.97□□□□□ -0.17
CSDE1-217ENST00000534699 HTATSF1O43719 755 aaKnown RBP13.97□□□□□ -0.17
CSDE1-217ENST00000534699 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
CSDE1-217ENST00000534699 RTCBQ9Y3I0 505 aaKnown RBP13.97□□□□□ -0.17
CSDE1-217ENST00000534699 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
CSDE1-217ENST00000534699 NLGN1Q8N2Q7 840 aa13.96□□□□□ -0.17
CSDE1-217ENST00000534699 TEX13AQ9BXU3 409 aaPredicted RBP13.96□□□□□ -0.18
CSDE1-217ENST00000534699 PNNQ9H307 717 aaKnown RBP13.96□□□□□ -0.18
CSDE1-217ENST00000534699 CC2D1BQ5T0F9 858 aaKnown RBP13.95□□□□□ -0.18
CSDE1-217ENST00000534699 AEBP1Q8IUX7 1158 aa13.95□□□□□ -0.18
CSDE1-217ENST00000534699 C4AP0C0L4 1744 aa13.95□□□□□ -0.18
CSDE1-217ENST00000534699 TRAPPC3LQ5T215 181 aa13.95□□□□□ -0.18
CSDE1-217ENST00000534699 FCHSD2O94868 740 aa13.94□□□□□ -0.18
CSDE1-217ENST00000534699 ITPK1Q13572 414 aa13.94□□□□□ -0.18
CSDE1-217ENST00000534699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
CSDE1-217ENST00000534699 YY1P25490 414 aa13.93□□□□□ -0.18
CSDE1-217ENST00000534699 KCPQ6ZWJ8 1503 aa13.93□□□□□ -0.18
CSDE1-217ENST00000534699 RGL2O15211 777 aa13.93□□□□□ -0.18
CSDE1-217ENST00000534699 MSH5O43196 834 aa13.93□□□□□ -0.18
CSDE1-217ENST00000534699 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
CSDE1-217ENST00000534699 GNPATO15228 680 aa13.92□□□□□ -0.18
CSDE1-217ENST00000534699 MYH14Q7Z406 1995 aaKnown RBP13.91□□□□□ -0.18
CSDE1-217ENST00000534699 CEMIPQ8WUJ3 1361 aa13.91□□□□□ -0.18
CSDE1-217ENST00000534699 PPP2R1AP30153 589 aa13.91□□□□□ -0.18
CSDE1-217ENST00000534699 NFATC2IPQ8NCF5 419 aa13.91□□□□□ -0.18
CSDE1-217ENST00000534699 TGFB2P61812 414 aa13.91□□□□□ -0.18
CSDE1-217ENST00000534699 MTHFSDQ2M296 383 aaKnown RBP13.91□□□□□ -0.18
CSDE1-217ENST00000534699 A0A087WZG4 1122 aa13.9□□□□□ -0.18
CSDE1-217ENST00000534699 KCNQ4P56696 695 aa13.9□□□□□ -0.18
CSDE1-217ENST00000534699 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
CSDE1-217ENST00000534699 RALBP1Q15311 655 aa13.9□□□□□ -0.18
CSDE1-217ENST00000534699 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
CSDE1-217ENST00000534699 SLC4A9Q96Q91 983 aa13.89□□□□□ -0.19
CSDE1-217ENST00000534699 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
CSDE1-217ENST00000534699 CCDC87Q9NVE4 849 aa13.89□□□□□ -0.19
CSDE1-217ENST00000534699 PDZRN3Q9UPQ7 1066 aa13.89□□□□□ -0.19
CSDE1-217ENST00000534699 NRXN2Q9P2S2 1712 aa13.89□□□□□ -0.19
CSDE1-217ENST00000534699 C10orf71Q711Q0 1435 aa13.89□□□□□ -0.19
CSDE1-217ENST00000534699 RFC4P35249 363 aa13.88□□□□□ -0.19
CSDE1-217ENST00000534699 NEFMP07197 916 aa13.88□□□□□ -0.19
CSDE1-217ENST00000534699 HMOX1P09601 288 aa13.88□□□□□ -0.19
CSDE1-217ENST00000534699 GPR162Q16538 588 aa13.88□□□□□ -0.19
CSDE1-217ENST00000534699 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
CSDE1-217ENST00000534699 ARFGEF1Q9Y6D6 1849 aa13.87□□□□□ -0.19
CSDE1-217ENST00000534699 TEFQ10587 303 aa13.87□□□□□ -0.19
CSDE1-217ENST00000534699 U2SURPO15042 1029 aaKnown RBP13.87□□□□□ -0.19
CSDE1-217ENST00000534699 STARD3NLO95772 234 aa13.87□□□□□ -0.19
CSDE1-217ENST00000534699 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
CSDE1-217ENST00000534699 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
CSDE1-217ENST00000534699 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
CSDE1-217ENST00000534699 SOS1Q07889 1333 aaPredicted RBP13.87□□□□□ -0.19
CSDE1-217ENST00000534699 USP42Q9H9J4 1324 aaKnown RBP13.86□□□□□ -0.19
CSDE1-217ENST00000534699 BRCA1P38398 1863 aaKnown RBP13.86□□□□□ -0.19
CSDE1-217ENST00000534699 CYP19A1P11511 503 aaPredicted RBP13.86□□□□□ -0.19
CSDE1-217ENST00000534699 LGR6Q9HBX8 967 aa13.86□□□□□ -0.19
CSDE1-217ENST00000534699 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
CSDE1-217ENST00000534699 PARP3Q9Y6F1 533 aa13.86□□□□□ -0.19
CSDE1-217ENST00000534699 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
CSDE1-217ENST00000534699 SCN7AQ01118 1682 aa13.85□□□□□ -0.19
CSDE1-217ENST00000534699 GYS1P13807 737 aa13.85□□□□□ -0.19
CSDE1-217ENST00000534699 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
CSDE1-217ENST00000534699 PHF14O94880 888 aa13.84□□□□□ -0.19
CSDE1-217ENST00000534699 FMNL2Q96PY5 1086 aa13.84□□□□□ -0.19
CSDE1-217ENST00000534699 NARFQ9UHQ1 456 aa13.84□□□□□ -0.19
CSDE1-217ENST00000534699 BABAM1Q9NWV8 329 aa13.84□□□□□ -0.19
CSDE1-217ENST00000534699 DLEC1Q9Y238 1755 aa13.84□□□□□ -0.19
CSDE1-217ENST00000534699 PRKAR2BP31323 418 aa13.83□□□□□ -0.2
CSDE1-217ENST00000534699 ZEB1P37275 1124 aaPredicted RBP13.83□□□□□ -0.2
CSDE1-217ENST00000534699 RTF1Q92541 710 aaKnown RBP13.83□□□□□ -0.2
CSDE1-217ENST00000534699 ZNF790Q6PG37 636 aa13.83□□□□□ -0.2
CSDE1-217ENST00000534699 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
CSDE1-217ENST00000534699 BCORQ6W2J9 1755 aa13.83□□□□□ -0.2
CSDE1-217ENST00000534699 PTCD1O75127 700 aaKnown RBP13.82□□□□□ -0.2
CSDE1-217ENST00000534699 MMP10P09238 476 aa13.82□□□□□ -0.2
CSDE1-217ENST00000534699 KDM3BQ7LBC6 1761 aa13.82□□□□□ -0.2
CSDE1-217ENST00000534699 DLG5Q8TDM6 1919 aa13.82□□□□□ -0.2
CSDE1-217ENST00000534699 ZPR1O75312 459 aa13.82□□□□□ -0.2
CSDE1-217ENST00000534699 U2AF1L5P0DN76 240 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms