RNA–Protein interactions for RNA: ENST00000534270.1

RECQL4-206, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-206ENST00000534270 DCAF5Q96JK2 942 aa29.26■■■□□ 2.27
RECQL4-206ENST00000534270 C4BP0C0L5 1744 aa29.25■■■□□ 2.27
RECQL4-206ENST00000534270 SLC4A9Q96Q91 983 aa29.25■■■□□ 2.27
RECQL4-206ENST00000534270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.24■■■□□ 2.27
RECQL4-206ENST00000534270 KDM6AO15550 1401 aaPredicted RBP29.24■■■□□ 2.27
RECQL4-206ENST00000534270 FLAD1Q8NFF5 587 aa29.24■■■□□ 2.27
RECQL4-206ENST00000534270 GOLGB1Q14789 3259 aaKnown RBP29.24■■■□□ 2.27
RECQL4-206ENST00000534270 HSP90AB1P08238 724 aaKnown RBP29.23■■■□□ 2.27
RECQL4-206ENST00000534270 GPR162Q16538 588 aa29.23■■■□□ 2.27
RECQL4-206ENST00000534270 HMGB2P26583 209 aaKnown RBP29.22■■■□□ 2.27
RECQL4-206ENST00000534270 CABP4P57796 275 aa29.22■■■□□ 2.27
RECQL4-206ENST00000534270 RBM42Q9BTD8 480 aaKnown RBP29.22■■■□□ 2.27
RECQL4-206ENST00000534270 PLEKHG2Q9H7P9 1386 aa29.22■■■□□ 2.27
RECQL4-206ENST00000534270 HMOX1P09601 288 aa29.21■■■□□ 2.27
RECQL4-206ENST00000534270 PELP1Q8IZL8 1130 aaKnown RBP29.21■■■□□ 2.27
RECQL4-206ENST00000534270 C1orf141Q5JVX7 400 aa29.2■■■□□ 2.26
RECQL4-206ENST00000534270 KDRP35968 1356 aa29.2■■■□□ 2.26
RECQL4-206ENST00000534270 GNPATO15228 680 aa29.19■■■□□ 2.26
RECQL4-206ENST00000534270 NFATC2IPQ8NCF5 419 aa29.19■■■□□ 2.26
RECQL4-206ENST00000534270 SSFA2P28290 1259 aa29.16■■■□□ 2.26
RECQL4-206ENST00000534270 UBR3Q6ZT12 1888 aa29.16■■■□□ 2.26
RECQL4-206ENST00000534270 DIAPH1O60610 1272 aaKnown RBP29.14■■■□□ 2.26
RECQL4-206ENST00000534270 PTCD1O75127 700 aaKnown RBP29.14■■■□□ 2.26
RECQL4-206ENST00000534270 LGR6Q9HBX8 967 aa29.14■■■□□ 2.26
RECQL4-206ENST00000534270 YBX3P16989 372 aaKnown RBP eCLIP29.11■■■□□ 2.25
RECQL4-206ENST00000534270 MTHFSDQ2M296 383 aaKnown RBP29.1■■■□□ 2.25
RECQL4-206ENST00000534270 AKAP4Q5JQC9 854 aa29.1■■■□□ 2.25
RECQL4-206ENST00000534270 ZNF784Q8NCA9 323 aaPredicted RBP29.1■■■□□ 2.25
RECQL4-206ENST00000534270 CD2APQ9Y5K6 639 aa29.09■■■□□ 2.25
RECQL4-206ENST00000534270 TRAPPC3LQ5T215 181 aa29.08■■■□□ 2.25
RECQL4-206ENST00000534270 RTCBQ9Y3I0 505 aaKnown RBP29.08■■■□□ 2.25
RECQL4-206ENST00000534270 NPC1L1Q9UHC9 1359 aa29.07■■■□□ 2.24
RECQL4-206ENST00000534270 RC3H1Q5TC82 1133 aaKnown RBP29.06■■■□□ 2.24
RECQL4-206ENST00000534270 ARHGEF1Q92888 912 aaKnown RBP29.06■■■□□ 2.24
RECQL4-206ENST00000534270 RNMTO43148 476 aaKnown RBP29.05■■■□□ 2.24
RECQL4-206ENST00000534270 WWC3Q9ULE0 1092 aa29.05■■■□□ 2.24
RECQL4-206ENST00000534270 U2SURPO15042 1029 aaKnown RBP29.04■■■□□ 2.24
RECQL4-206ENST00000534270 SLC52A2Q9HAB3 445 aa29.04■■■□□ 2.24
RECQL4-206ENST00000534270 RPS6KA4O75676 772 aa29.03■■■□□ 2.24
RECQL4-206ENST00000534270 SLC39A6Q13433 755 aa29.03■■■□□ 2.24
RECQL4-206ENST00000534270 CNTNAP4Q9C0A0 1308 aa29.02■■■□□ 2.24
RECQL4-206ENST00000534270 MMP10P09238 476 aa29.02■■■□□ 2.24
RECQL4-206ENST00000534270 CHD4Q14839 1912 aa29.01■■■□□ 2.23
RECQL4-206ENST00000534270 COL3A1P02461 1466 aaPredicted RBP29.01■■■□□ 2.23
RECQL4-206ENST00000534270 CRKLP46109 303 aaKnown RBP29■■■□□ 2.23
RECQL4-206ENST00000534270 SCN11AQ9UI33 1791 aa29■■■□□ 2.23
RECQL4-206ENST00000534270 MYH14Q7Z406 1995 aaKnown RBP28.99■■■□□ 2.23
RECQL4-206ENST00000534270 RFC4P35249 363 aa28.98■■■□□ 2.23
RECQL4-206ENST00000534270 DNAJC10Q8IXB1 793 aa28.98■■■□□ 2.23
RECQL4-206ENST00000534270 ZNF831Q5JPB2 1677 aa28.98■■■□□ 2.23
RECQL4-206ENST00000534270 COL5A3P25940 1745 aaPredicted RBP28.97■■■□□ 2.23
RECQL4-206ENST00000534270 GRIN3BO60391 1043 aa28.97■■■□□ 2.23
RECQL4-206ENST00000534270 GYS1P13807 737 aa28.97■■■□□ 2.23
RECQL4-206ENST00000534270 INTS5Q6P9B9 1019 aaKnown RBP28.97■■■□□ 2.23
RECQL4-206ENST00000534270 ADRA2BP18089 450 aa28.96■■■□□ 2.23
RECQL4-206ENST00000534270 NLGN1Q8N2Q7 840 aa28.96■■■□□ 2.23
RECQL4-206ENST00000534270 SRP68Q9UHB9 627 aaKnown RBP28.96■■■□□ 2.23
RECQL4-206ENST00000534270 IL17REQ8NFR9 667 aa28.93■■■□□ 2.22
RECQL4-206ENST00000534270 PHACTR3Q96KR7 559 aa28.93■■■□□ 2.22
RECQL4-206ENST00000534270 PPP2R1AP30153 589 aa28.92■■■□□ 2.22
RECQL4-206ENST00000534270 TJP1Q07157 1748 aa28.91■■■□□ 2.22
RECQL4-206ENST00000534270 FKBP8Q14318 412 aa28.9■■■□□ 2.22
RECQL4-206ENST00000534270 CYP19A1P11511 503 aaPredicted RBP28.89■■■□□ 2.22
RECQL4-206ENST00000534270 MRC1P22897 1456 aa28.89■■■□□ 2.22
RECQL4-206ENST00000534270 A0A0G2JLW4 131 aa28.88■■■□□ 2.21
RECQL4-206ENST00000534270 CFAP53Q96M91 514 aa28.88■■■□□ 2.21
RECQL4-206ENST00000534270 CCDC87Q9NVE4 849 aa28.88■■■□□ 2.21
RECQL4-206ENST00000534270 GNAT3A8MTJ3 354 aa28.87■■■□□ 2.21
RECQL4-206ENST00000534270 PRKAR2BP31323 418 aa28.87■■■□□ 2.21
RECQL4-206ENST00000534270 RSPH6AQ9H0K4 717 aa28.87■■■□□ 2.21
RECQL4-206ENST00000534270 CICQ96RK0 1608 aaPredicted RBP28.87■■■□□ 2.21
RECQL4-206ENST00000534270 GAS2L2Q8NHY3 880 aa28.86■■■□□ 2.21
RECQL4-206ENST00000534270 PARP3Q9Y6F1 533 aa28.86■■■□□ 2.21
RECQL4-206ENST00000534270 USP42Q9H9J4 1324 aaKnown RBP28.86■■■□□ 2.21
RECQL4-206ENST00000534270 VIRMAQ69YN4 1812 aaKnown RBP28.85■■■□□ 2.21
RECQL4-206ENST00000534270 KCPQ6ZWJ8 1503 aa28.85■■■□□ 2.21
RECQL4-206ENST00000534270 ADAMTS7Q9UKP4 1686 aa28.85■■■□□ 2.21
RECQL4-206ENST00000534270 C4AP0C0L4 1744 aa28.83■■■□□ 2.21
RECQL4-206ENST00000534270 U2AF1L5P0DN76 240 aaPredicted RBP28.83■■■□□ 2.21
RECQL4-206ENST00000534270 U2AF1Q01081 240 aaKnown RBP eCLIP28.83■■■□□ 2.21
RECQL4-206ENST00000534270 DDR1Q08345 913 aa28.83■■■□□ 2.21
RECQL4-206ENST00000534270 ZBTB1Q9Y2K1 713 aa28.83■■■□□ 2.21
RECQL4-206ENST00000534270 SOS1Q07889 1333 aaPredicted RBP28.83■■■□□ 2.21
RECQL4-206ENST00000534270 DPEP1P16444 411 aa28.82■■■□□ 2.2
RECQL4-206ENST00000534270 TEFQ10587 303 aa28.82■■■□□ 2.2
RECQL4-206ENST00000534270 USPL1Q5W0Q7 1092 aa28.82■■■□□ 2.2
RECQL4-206ENST00000534270 PXDNLA1KZ92 1463 aa28.82■■■□□ 2.2
RECQL4-206ENST00000534270 TGFB2P61812 414 aa28.81■■■□□ 2.2
RECQL4-206ENST00000534270 ZNF496Q96IT1 587 aaPredicted RBP28.81■■■□□ 2.2
RECQL4-206ENST00000534270 NUDCQ9Y266 331 aa28.81■■■□□ 2.2
RECQL4-206ENST00000534270 KCNQ3O43525 872 aa28.8■■■□□ 2.2
RECQL4-206ENST00000534270 TTC5Q8N0Z6 440 aa28.8■■■□□ 2.2
RECQL4-206ENST00000534270 VSIG10Q8N0Z9 540 aa28.8■■■□□ 2.2
RECQL4-206ENST00000534270 C10orf71Q711Q0 1435 aa28.79■■■□□ 2.2
RECQL4-206ENST00000534270 ZPR1O75312 459 aa28.79■■■□□ 2.2
RECQL4-206ENST00000534270 CANXP27824 592 aaKnown RBP28.79■■■□□ 2.2
RECQL4-206ENST00000534270 TM4SF1P30408 202 aa28.79■■■□□ 2.2
RECQL4-206ENST00000534270 ZNF790Q6PG37 636 aa28.78■■■□□ 2.2
RECQL4-206ENST00000534270 BCS1LQ9Y276 419 aa28.77■■■□□ 2.2
RECQL4-206ENST00000534270 N4BP2Q86UW6 1770 aaPredicted RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms