RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 MAP2P11137 1827 aaKnown RBP29.42■■■□□ 2.3
SSH3-211ENST00000534112 ADCY9O60503 1353 aa29.39■■■□□ 2.3
SSH3-211ENST00000534112 MMP10P09238 476 aa29.37■■■□□ 2.29
SSH3-211ENST00000534112 ZNF526Q8TF50 670 aaPredicted RBP29.37■■■□□ 2.29
SSH3-211ENST00000534112 ERVV-2B6SEH9 535 aa29.36■■■□□ 2.29
SSH3-211ENST00000534112 PLEKHG2Q9H7P9 1386 aa29.36■■■□□ 2.29
SSH3-211ENST00000534112 TRAPPC3LQ5T215 181 aa29.35■■■□□ 2.29
SSH3-211ENST00000534112 SLC4A9Q96Q91 983 aa29.35■■■□□ 2.29
SSH3-211ENST00000534112 DCAF5Q96JK2 942 aa29.34■■■□□ 2.29
SSH3-211ENST00000534112 RBM42Q9BTD8 480 aaKnown RBP29.34■■■□□ 2.29
SSH3-211ENST00000534112 RTCBQ9Y3I0 505 aaKnown RBP29.34■■■□□ 2.29
SSH3-211ENST00000534112 HSP90AB1P08238 724 aaKnown RBP29.33■■■□□ 2.29
SSH3-211ENST00000534112 KDRP35968 1356 aa29.33■■■□□ 2.29
SSH3-211ENST00000534112 PLEKHO1Q53GL0 409 aaPredicted RBP29.32■■■□□ 2.28
SSH3-211ENST00000534112 RC3H1Q5TC82 1133 aaKnown RBP29.31■■■□□ 2.28
SSH3-211ENST00000534112 NLGN1Q8N2Q7 840 aa29.31■■■□□ 2.28
SSH3-211ENST00000534112 PANK3Q9H999 370 aa29.31■■■□□ 2.28
SSH3-211ENST00000534112 CLSPNQ9HAW4 1339 aa29.3■■■□□ 2.28
SSH3-211ENST00000534112 ARHGEF1Q92888 912 aaKnown RBP29.29■■■□□ 2.28
SSH3-211ENST00000534112 ADRA2BP18089 450 aa29.28■■■□□ 2.28
SSH3-211ENST00000534112 TGFB2P61812 414 aa29.28■■■□□ 2.28
SSH3-211ENST00000534112 AMOTQ4VCS5 1084 aa29.28■■■□□ 2.28
SSH3-211ENST00000534112 ZNF530Q6P9A1 599 aaPredicted RBP29.28■■■□□ 2.28
SSH3-211ENST00000534112 CABP4P57796 275 aa29.27■■■□□ 2.28
SSH3-211ENST00000534112 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
SSH3-211ENST00000534112 CNTNAP4Q9C0A0 1308 aa29.26■■■□□ 2.27
SSH3-211ENST00000534112 EIF4G2P78344 907 aaKnown RBP eCLIP29.26■■■□□ 2.27
SSH3-211ENST00000534112 PXDNLA1KZ92 1463 aa29.25■■■□□ 2.27
SSH3-211ENST00000534112 RPS6KA4O75676 772 aa29.25■■■□□ 2.27
SSH3-211ENST00000534112 HSPA6P17066 643 aa29.25■■■□□ 2.27
SSH3-211ENST00000534112 RFC4P35249 363 aa29.25■■■□□ 2.27
SSH3-211ENST00000534112 A0A0G2JLW4 131 aa29.24■■■□□ 2.27
SSH3-211ENST00000534112 KDM6AO15550 1401 aaPredicted RBP29.24■■■□□ 2.27
SSH3-211ENST00000534112 HSPA5P11021 654 aaKnown RBP29.24■■■□□ 2.27
SSH3-211ENST00000534112 GYS1P13807 737 aa29.24■■■□□ 2.27
SSH3-211ENST00000534112 MTHFSP49914 203 aa29.24■■■□□ 2.27
SSH3-211ENST00000534112 AEBP1Q8IUX7 1158 aa29.23■■■□□ 2.27
SSH3-211ENST00000534112 BCS1LQ9Y276 419 aa29.23■■■□□ 2.27
SSH3-211ENST00000534112 MORC1Q86VD1 984 aa29.22■■■□□ 2.27
SSH3-211ENST00000534112 KIF3CO14782 793 aa29.21■■■□□ 2.27
SSH3-211ENST00000534112 PTCD1O75127 700 aaKnown RBP29.21■■■□□ 2.27
SSH3-211ENST00000534112 C1orf141Q5JVX7 400 aa29.21■■■□□ 2.27
SSH3-211ENST00000534112 CCDC87Q9NVE4 849 aa29.21■■■□□ 2.27
SSH3-211ENST00000534112 CICQ96RK0 1608 aaPredicted RBP29.2■■■□□ 2.27
SSH3-211ENST00000534112 PARP3Q9Y6F1 533 aa29.2■■■□□ 2.26
SSH3-211ENST00000534112 C10orf71Q711Q0 1435 aa29.2■■■□□ 2.26
SSH3-211ENST00000534112 DPEP1P16444 411 aa29.19■■■□□ 2.26
SSH3-211ENST00000534112 NFATC2IPQ8NCF5 419 aa29.19■■■□□ 2.26
SSH3-211ENST00000534112 SULT6B1Q6IMI4 303 aa29.18■■■□□ 2.26
SSH3-211ENST00000534112 ZNF831Q5JPB2 1677 aa29.18■■■□□ 2.26
SSH3-211ENST00000534112 IFFO2Q5TF58 517 aa29.16■■■□□ 2.26
SSH3-211ENST00000534112 ARHGAP27Q6ZUM4 889 aa29.16■■■□□ 2.26
SSH3-211ENST00000534112 CRKLP46109 303 aaKnown RBP29.15■■■□□ 2.26
SSH3-211ENST00000534112 FCHSD2O94868 740 aa29.14■■■□□ 2.26
SSH3-211ENST00000534112 KIF13BQ9NQT8 1826 aa29.14■■■□□ 2.26
SSH3-211ENST00000534112 IL13P35225 146 aa29.13■■■□□ 2.25
SSH3-211ENST00000534112 SRP68Q9UHB9 627 aaKnown RBP29.13■■■□□ 2.25
SSH3-211ENST00000534112 KCNA3P22001 575 aa29.12■■■□□ 2.25
SSH3-211ENST00000534112 KNSTRNQ9Y448 316 aa29.12■■■□□ 2.25
SSH3-211ENST00000534112 COL5A3P25940 1745 aaPredicted RBP29.11■■■□□ 2.25
SSH3-211ENST00000534112 KIAA1551Q9HCM1 1747 aa29.11■■■□□ 2.25
SSH3-211ENST00000534112 FKBP8Q14318 412 aa29.11■■■□□ 2.25
SSH3-211ENST00000534112 C4AP0C0L4 1744 aa29.1■■■□□ 2.25
SSH3-211ENST00000534112 N4BP2Q86UW6 1770 aaPredicted RBP29.1■■■□□ 2.25
SSH3-211ENST00000534112 MYH14Q7Z406 1995 aaKnown RBP29.1■■■□□ 2.25
SSH3-211ENST00000534112 USP42Q9H9J4 1324 aaKnown RBP29.09■■■□□ 2.25
SSH3-211ENST00000534112 INTS5Q6P9B9 1019 aaKnown RBP29.08■■■□□ 2.25
SSH3-211ENST00000534112 PIM2Q9P1W9 311 aa29.08■■■□□ 2.25
SSH3-211ENST00000534112 DDR1Q08345 913 aa29.07■■■□□ 2.24
SSH3-211ENST00000534112 AKAP4Q5JQC9 854 aa29.07■■■□□ 2.24
SSH3-211ENST00000534112 TOMM70O94826 608 aa29.06■■■□□ 2.24
SSH3-211ENST00000534112 AMER1Q5JTC6 1135 aaPredicted RBP29.04■■■□□ 2.24
SSH3-211ENST00000534112 C9orf131Q5VYM1 1079 aa29.04■■■□□ 2.24
SSH3-211ENST00000534112 SLC52A2Q9HAB3 445 aa29.04■■■□□ 2.24
SSH3-211ENST00000534112 LGR6Q9HBX8 967 aa29.04■■■□□ 2.24
SSH3-211ENST00000534112 NMRK2Q9NPI5 230 aa29.04■■■□□ 2.24
SSH3-211ENST00000534112 DALRD3Q5D0E6 543 aaKnown RBP29.03■■■□□ 2.24
SSH3-211ENST00000534112 DNAJC10Q8IXB1 793 aa29.03■■■□□ 2.24
SSH3-211ENST00000534112 TM4SF1P30408 202 aa29.02■■■□□ 2.24
SSH3-211ENST00000534112 APLP1P51693 650 aa29.02■■■□□ 2.24
SSH3-211ENST00000534112 POLRMTO00411 1230 aaKnown RBP29.01■■■□□ 2.23
SSH3-211ENST00000534112 ZPR1O75312 459 aa29■■■□□ 2.23
SSH3-211ENST00000534112 CHRNA5P30532 468 aa29■■■□□ 2.23
SSH3-211ENST00000534112 SLC39A6Q13433 755 aa28.99■■■□□ 2.23
SSH3-211ENST00000534112 USPL1Q5W0Q7 1092 aa28.99■■■□□ 2.23
SSH3-211ENST00000534112 SOS1Q07889 1333 aaPredicted RBP28.98■■■□□ 2.23
SSH3-211ENST00000534112 RNMTO43148 476 aaKnown RBP28.98■■■□□ 2.23
SSH3-211ENST00000534112 CYP19A1P11511 503 aaPredicted RBP28.98■■■□□ 2.23
SSH3-211ENST00000534112 HMOX1P09601 288 aa28.97■■■□□ 2.23
SSH3-211ENST00000534112 TJP1Q07157 1748 aa28.97■■■□□ 2.23
SSH3-211ENST00000534112 BRCA1P38398 1863 aaKnown RBP28.95■■■□□ 2.23
SSH3-211ENST00000534112 CCER1Q8TC90 406 aaPredicted RBP28.95■■■□□ 2.22
SSH3-211ENST00000534112 DNAJC5GQ8N7S2 189 aa28.94■■■□□ 2.22
SSH3-211ENST00000534112 RBM46Q8TBY0 533 aaKnown RBP28.94■■■□□ 2.22
SSH3-211ENST00000534112 RNF181Q9P0P0 153 aa28.94■■■□□ 2.22
SSH3-211ENST00000534112 SCN11AQ9UI33 1791 aa28.93■■■□□ 2.22
SSH3-211ENST00000534112 MTHFSDQ2M296 383 aaKnown RBP28.93■■■□□ 2.22
SSH3-211ENST00000534112 NARFQ9UHQ1 456 aa28.93■■■□□ 2.22
SSH3-211ENST00000534112 NFIXQ14938 502 aa28.92■■■□□ 2.22
SSH3-211ENST00000534112 ZBTB1Q9Y2K1 713 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms