RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 C1orf141Q5JVX7 400 aa35.67■■■■□ 3.3
SAMD1-202ENST00000533683 KDM3BQ7LBC6 1761 aa35.67■■■■□ 3.3
SAMD1-202ENST00000533683 RPAP2Q8IXW5 612 aaPredicted RBP35.66■■■■□ 3.3
SAMD1-202ENST00000533683 EIF4A1P60842 406 aaKnown RBP35.66■■■■□ 3.3
SAMD1-202ENST00000533683 TEFQ10587 303 aa35.66■■■■□ 3.3
SAMD1-202ENST00000533683 CEP85Q6P2H3 762 aa35.65■■■■□ 3.3
SAMD1-202ENST00000533683 CABLES1Q8TDN4 633 aa35.65■■■■□ 3.3
SAMD1-202ENST00000533683 RNMTO43148 476 aaKnown RBP35.65■■■■□ 3.3
SAMD1-202ENST00000533683 DCTPP1Q9H773 170 aa35.65■■■■□ 3.3
SAMD1-202ENST00000533683 FKBP5Q13451 457 aaPredicted RBP35.64■■■■□ 3.3
SAMD1-202ENST00000533683 HDGFL1Q5TGJ6 251 aa35.64■■■■□ 3.3
SAMD1-202ENST00000533683 SPATA31A3Q5VYP0 1347 aa35.63■■■■□ 3.29
SAMD1-202ENST00000533683 COL18A1P39060 1754 aa35.62■■■■□ 3.29
SAMD1-202ENST00000533683 UPF2Q9HAU5 1272 aaKnown RBP35.62■■■■□ 3.29
SAMD1-202ENST00000533683 BTBD11A6QL63 1104 aa35.61■■■■□ 3.29
SAMD1-202ENST00000533683 KCNQ3O43525 872 aa35.61■■■■□ 3.29
SAMD1-202ENST00000533683 OVOS2A0A0G2JMS6 1433 aa35.61■■■■□ 3.29
SAMD1-202ENST00000533683 SLC4A3P48751 1232 aa35.6■■■■□ 3.29
SAMD1-202ENST00000533683 BRINP3Q76B58 766 aa35.59■■■■□ 3.29
SAMD1-202ENST00000533683 NLRP2Q9NX02 1062 aa35.59■■■■□ 3.29
SAMD1-202ENST00000533683 HOXB7P09629 217 aa35.58■■■■□ 3.29
SAMD1-202ENST00000533683 TBC1D32Q96NH3 1257 aa35.58■■■■□ 3.29
SAMD1-202ENST00000533683 CRYBG1Q9Y4K1 1723 aa35.57■■■■□ 3.28
SAMD1-202ENST00000533683 DAXXQ9UER7 740 aaPredicted RBP35.56■■■■□ 3.28
SAMD1-202ENST00000533683 BMP2KLQ5H9B9 411 aa35.55■■■■□ 3.28
SAMD1-202ENST00000533683 EIF2S2P20042 333 aaKnown RBP35.55■■■■□ 3.28
SAMD1-202ENST00000533683 ZNF335Q9H4Z2 1342 aaPredicted RBP35.54■■■■□ 3.28
SAMD1-202ENST00000533683 CHRNA2Q15822 529 aa35.54■■■■□ 3.28
SAMD1-202ENST00000533683 RAPGEF4Q8WZA2 1011 aa35.54■■■■□ 3.28
SAMD1-202ENST00000533683 PHAXQ9H814 394 aaKnown RBP35.54■■■■□ 3.28
SAMD1-202ENST00000533683 ADAMTS7Q9UKP4 1686 aa35.51■■■■□ 3.28
SAMD1-202ENST00000533683 ABCC6O95255 1503 aa35.51■■■■□ 3.27
SAMD1-202ENST00000533683 CHMP4AQ9BY43 222 aa35.51■■■■□ 3.27
SAMD1-202ENST00000533683 N4BP2Q86UW6 1770 aaPredicted RBP35.51■■■■□ 3.27
SAMD1-202ENST00000533683 PXDNLA1KZ92 1463 aa35.5■■■■□ 3.27
SAMD1-202ENST00000533683 GNAI2P04899 355 aa35.5■■■■□ 3.27
SAMD1-202ENST00000533683 CPDO75976 1380 aa35.5■■■■□ 3.27
SAMD1-202ENST00000533683 CSB-PGBD3P0DP91 1061 aa35.49■■■■□ 3.27
SAMD1-202ENST00000533683 SIPA1L3O60292 1781 aaPredicted RBP35.49■■■■□ 3.27
SAMD1-202ENST00000533683 SLAIN2Q9P270 581 aa35.49■■■■□ 3.27
SAMD1-202ENST00000533683 CHPF2Q9P2E5 772 aa35.49■■■■□ 3.27
SAMD1-202ENST00000533683 NBR1Q14596 966 aa35.48■■■■□ 3.27
SAMD1-202ENST00000533683 GNAI3P08754 354 aa35.48■■■■□ 3.27
SAMD1-202ENST00000533683 TATP17735 454 aaPredicted RBP35.48■■■■□ 3.27
SAMD1-202ENST00000533683 MFAP1P55081 439 aaKnown RBP35.48■■■■□ 3.27
SAMD1-202ENST00000533683 HMMRO75330 724 aa35.47■■■■□ 3.27
SAMD1-202ENST00000533683 MEGF6O75095 1541 aa35.47■■■■□ 3.27
SAMD1-202ENST00000533683 PLEKHM2Q8IWE5 1019 aa35.46■■■■□ 3.27
SAMD1-202ENST00000533683 HEG1Q9ULI3 1381 aa35.45■■■■□ 3.27
SAMD1-202ENST00000533683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.44■■■■□ 3.268e-12■■■□□ 17.5
SAMD1-202ENST00000533683 GIGYF1O75420 1035 aaPredicted RBP35.44■■■■□ 3.26
SAMD1-202ENST00000533683 SPG7Q9UQ90 795 aa35.44■■■■□ 3.26
SAMD1-202ENST00000533683 C16orf71Q8IYS4 520 aaPredicted RBP35.43■■■■□ 3.26
SAMD1-202ENST00000533683 SOS2Q07890 1332 aaPredicted RBP35.42■■■■□ 3.26
SAMD1-202ENST00000533683 C22orf23Q9BZE7 217 aa35.42■■■■□ 3.26
SAMD1-202ENST00000533683 USP44Q9H0E7 712 aa35.42■■■■□ 3.26
SAMD1-202ENST00000533683 PHKG2P15735 406 aa35.41■■■■□ 3.26
SAMD1-202ENST00000533683 KDM6AO15550 1401 aaPredicted RBP35.4■■■■□ 3.26
SAMD1-202ENST00000533683 SCN11AQ9UI33 1791 aa35.4■■■■□ 3.26
SAMD1-202ENST00000533683 ANXA1P04083 346 aa35.4■■■■□ 3.26
SAMD1-202ENST00000533683 APBB1O00213 710 aa35.39■■■■□ 3.26
SAMD1-202ENST00000533683 SMARCA5O60264 1052 aaPredicted RBP35.39■■■■□ 3.26
SAMD1-202ENST00000533683 BCL11AQ9H165 835 aa35.39■■■■□ 3.26
SAMD1-202ENST00000533683 DBF4Q9UBU7 674 aaPredicted RBP35.39■■■■□ 3.26
SAMD1-202ENST00000533683 GSPT1P15170 499 aaKnown RBP35.37■■■■□ 3.25
SAMD1-202ENST00000533683 PLEKHG2Q9H7P9 1386 aa35.37■■■■□ 3.25
SAMD1-202ENST00000533683 IFNL2Q8IZJ0 200 aa35.37■■■■□ 3.25
SAMD1-202ENST00000533683 OTUD7AQ8TE49 926 aaPredicted RBP35.37■■■■□ 3.25
SAMD1-202ENST00000533683 SRCIN1Q9C0H9 1055 aa35.37■■■■□ 3.25
SAMD1-202ENST00000533683 SLC52A2Q9HAB3 445 aa35.37■■■■□ 3.25
SAMD1-202ENST00000533683 LRRFIP2Q9Y608 721 aaKnown RBP35.37■■■■□ 3.25
SAMD1-202ENST00000533683 PRAMEF22A3QJZ6 481 aa35.36■■■■□ 3.25
SAMD1-202ENST00000533683 PI4KAP2A4QPH2 592 aa35.36■■■■□ 3.25
SAMD1-202ENST00000533683 ATP8B2P98198 1209 aa35.36■■■■□ 3.25
SAMD1-202ENST00000533683 BECN1Q14457 450 aa35.36■■■■□ 3.25
SAMD1-202ENST00000533683 PI4KAP1Q8N8J0 262 aa35.36■■■■□ 3.25
SAMD1-202ENST00000533683 DNAAF4Q8WXU2 420 aa35.35■■■■□ 3.25
SAMD1-202ENST00000533683 PNMA6EA0A0J9YXQ4 647 aa35.34■■■■□ 3.25
SAMD1-202ENST00000533683 UBTFL1P0CB47 393 aaPredicted RBP35.34■■■■□ 3.25
SAMD1-202ENST00000533683 TTC22Q5TAA0 569 aa35.34■■■■□ 3.25
SAMD1-202ENST00000533683 TBC1D9Q6ZT07 1266 aa35.34■■■■□ 3.25
SAMD1-202ENST00000533683 CYP27B1O15528 508 aa35.32■■■■□ 3.25
SAMD1-202ENST00000533683 BEND3Q5T5X7 828 aa35.32■■■■□ 3.25
SAMD1-202ENST00000533683 PRDM11Q9NQV5 511 aa35.32■■■■□ 3.25
SAMD1-202ENST00000533683 ADCY9O60503 1353 aa35.32■■■■□ 3.24
SAMD1-202ENST00000533683 PROSER3Q2NL68 480 aa35.32■■■■□ 3.24
SAMD1-202ENST00000533683 ZNF790Q6PG37 636 aa35.32■■■■□ 3.24
SAMD1-202ENST00000533683 NFATC2IPQ8NCF5 419 aa35.32■■■■□ 3.24
SAMD1-202ENST00000533683 PKD1L3Q7Z443 1732 aa35.32■■■■□ 3.24
SAMD1-202ENST00000533683 SLC39A6Q13433 755 aa35.31■■■■□ 3.24
SAMD1-202ENST00000533683 EXOC6BQ9Y2D4 811 aa35.31■■■■□ 3.24
SAMD1-202ENST00000533683 DCAF5Q96JK2 942 aa35.29■■■■□ 3.24
SAMD1-202ENST00000533683 CDC45O75419 566 aa35.28■■■■□ 3.24
SAMD1-202ENST00000533683 WDR17Q8IZU2 1322 aa35.27■■■■□ 3.24
SAMD1-202ENST00000533683 RBM25P49756 843 aaKnown RBP35.27■■■■□ 3.24
SAMD1-202ENST00000533683 TBC1D2Q9BYX2 928 aa35.26■■■■□ 3.24
SAMD1-202ENST00000533683 HYPKQ9NX55 129 aa35.25■■■■□ 3.23
SAMD1-202ENST00000533683 NBPF7P0C2Y1 421 aaPredicted RBP35.24■■■■□ 3.23
SAMD1-202ENST00000533683 MRC1P22897 1456 aa35.24■■■■□ 3.23
SAMD1-202ENST00000533683 DDX21Q9NR30 783 aaKnown RBP eCLIP35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms