RNA–Protein interactions for RNA: ENST00000533161.5

RPS2-213, Transcript of ribosomal protein S2, human

TSL 1 (best)

Gene RPS2, Length 1,186 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS2-213	ENST00000533161	KDR	P35968	1356 aa		32.94	■■■□□ 2.86
RPS2-213	ENST00000533161	TRIM26	Q12899	539 aa	Predicted RBP	32.93	■■■□□ 2.86
RPS2-213	ENST00000533161	C4A	P0C0L4	1744 aa		32.92	■■■□□ 2.86
RPS2-213	ENST00000533161	ATP6V1A	P38606	617 aa		32.92	■■■□□ 2.86
RPS2-213	ENST00000533161	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.92	■■■□□ 2.86
RPS2-213	ENST00000533161	EIF4A2	Q14240	407 aa	Known RBP	32.9	■■■□□ 2.86
RPS2-213	ENST00000533161	WWC3	Q9ULE0	1092 aa		32.9	■■■□□ 2.86
RPS2-213	ENST00000533161	ATG3	Q9NT62	314 aa		32.89	■■■□□ 2.86
RPS2-213	ENST00000533161	BRCA1	P38398	1863 aa	Known RBP	32.88	■■■□□ 2.85
RPS2-213	ENST00000533161	TIMELESS	Q9UNS1	1208 aa		32.88	■■■□□ 2.85
RPS2-213	ENST00000533161	MYH14	Q7Z406	1995 aa	Known RBP	32.87	■■■□□ 2.85
RPS2-213	ENST00000533161	PXDNL	A1KZ92	1463 aa		32.86	■■■□□ 2.85
RPS2-213	ENST00000533161	TNNT2	P45379	298 aa	Predicted RBP	32.85	■■■□□ 2.85
RPS2-213	ENST00000533161	ZNF526	Q8TF50	670 aa	Predicted RBP	32.85	■■■□□ 2.85
RPS2-213	ENST00000533161	MMP10	P09238	476 aa		32.83	■■■□□ 2.85
RPS2-213	ENST00000533161	POLR3GL	Q9BT43	218 aa		32.82	■■■□□ 2.84
RPS2-213	ENST00000533161	KDM6A	O15550	1401 aa	Predicted RBP	32.81	■■■□□ 2.84
RPS2-213	ENST00000533161	C10orf71	Q711Q0	1435 aa		32.81	■■■□□ 2.84
RPS2-213	ENST00000533161	SLC4A9	Q96Q91	983 aa		32.8	■■■□□ 2.84
RPS2-213	ENST00000533161	ERVV-2	B6SEH9	535 aa		32.79	■■■□□ 2.84
RPS2-213	ENST00000533161	RTCB	Q9Y3I0	505 aa	Known RBP	32.79	■■■□□ 2.84
RPS2-213	ENST00000533161	TJP1	Q07157	1748 aa		32.79	■■■□□ 2.84
RPS2-213	ENST00000533161	DCAF5	Q96JK2	942 aa		32.78	■■■□□ 2.84
RPS2-213	ENST00000533161	ARFGEF1	Q9Y6D6	1849 aa		32.78	■■■□□ 2.84
RPS2-213	ENST00000533161	SCN11A	Q9UI33	1791 aa		32.78	■■■□□ 2.84
RPS2-213	ENST00000533161	VIRMA	Q69YN4	1812 aa	Known RBP	32.77	■■■□□ 2.84
RPS2-213	ENST00000533161	CNTNAP4	Q9C0A0	1308 aa		32.77	■■■□□ 2.84
RPS2-213	ENST00000533161	HSP90AB1	P08238	724 aa	Known RBP	32.76	■■■□□ 2.83
RPS2-213	ENST00000533161	TRAPPC3L	Q5T215	181 aa		32.76	■■■□□ 2.83
RPS2-213	ENST00000533161	RBM42	Q9BTD8	480 aa	Known RBP	32.76	■■■□□ 2.83
RPS2-213	ENST00000533161	CLSPN	Q9HAW4	1339 aa		32.75	■■■□□ 2.83
RPS2-213	ENST00000533161	HSPA6	P17066	643 aa		32.74	■■■□□ 2.83
RPS2-213	ENST00000533161	ADRA2B	P18089	450 aa		32.74	■■■□□ 2.83
RPS2-213	ENST00000533161	NLGN1	Q8N2Q7	840 aa		32.74	■■■□□ 2.83
RPS2-213	ENST00000533161	RC3H1	Q5TC82	1133 aa	Known RBP	32.73	■■■□□ 2.83
RPS2-213	ENST00000533161	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.72	■■■□□ 2.83
RPS2-213	ENST00000533161	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.72	■■■□□ 2.83
RPS2-213	ENST00000533161	ARHGEF1	Q92888	912 aa	Known RBP	32.72	■■■□□ 2.83
RPS2-213	ENST00000533161	TGFB2	P61812	414 aa		32.71	■■■□□ 2.83
RPS2-213	ENST00000533161	KIF3C	O14782	793 aa		32.69	■■■□□ 2.82
RPS2-213	ENST00000533161	GYS1	P13807	737 aa		32.69	■■■□□ 2.82
RPS2-213	ENST00000533161	AMOT	Q4VCS5	1084 aa		32.69	■■■□□ 2.82
RPS2-213	ENST00000533161	PANK3	Q9H999	370 aa		32.69	■■■□□ 2.82
RPS2-213	ENST00000533161	ADAMTS7	Q9UKP4	1686 aa		32.69	■■■□□ 2.82
RPS2-213	ENST00000533161	RPS6KA4	O75676	772 aa		32.68	■■■□□ 2.82
RPS2-213	ENST00000533161	CABP4	P57796	275 aa		32.68	■■■□□ 2.82
RPS2-213	ENST00000533161	BCS1L	Q9Y276	419 aa		32.68	■■■□□ 2.82
RPS2-213	ENST00000533161	CCDC87	Q9NVE4	849 aa		32.67	■■■□□ 2.82
RPS2-213	ENST00000533161		A0A0G2JLW4	131 aa		32.66	■■■□□ 2.82
RPS2-213	ENST00000533161	RFC4	P35249	363 aa		32.66	■■■□□ 2.82
RPS2-213	ENST00000533161	IFFO2	Q5TF58	517 aa		32.66	■■■□□ 2.82
RPS2-213	ENST00000533161	AEBP1	Q8IUX7	1158 aa		32.66	■■■□□ 2.82
RPS2-213	ENST00000533161	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.65	■■■□□ 2.82
RPS2-213	ENST00000533161	HSPA5	P11021	654 aa	Known RBP	32.64	■■■□□ 2.82
RPS2-213	ENST00000533161	MTHFS	P49914	203 aa		32.63	■■■□□ 2.81
RPS2-213	ENST00000533161	C1orf141	Q5JVX7	400 aa		32.63	■■■□□ 2.81
RPS2-213	ENST00000533161	PARP3	Q9Y6F1	533 aa		32.63	■■■□□ 2.81
RPS2-213	ENST00000533161	DPEP1	P16444	411 aa		32.62	■■■□□ 2.81
RPS2-213	ENST00000533161	PTCD1	O75127	700 aa	Known RBP	32.61	■■■□□ 2.81
RPS2-213	ENST00000533161	CRKL	P46109	303 aa	Known RBP	32.6	■■■□□ 2.81
RPS2-213	ENST00000533161	MORC1	Q86VD1	984 aa		32.6	■■■□□ 2.81
RPS2-213	ENST00000533161	NFATC2IP	Q8NCF5	419 aa		32.58	■■■□□ 2.81
RPS2-213	ENST00000533161	PCGF6	Q9BYE7	350 aa		32.58	■■■□□ 2.81
RPS2-213	ENST00000533161	SBF1	O95248	1867 aa		32.57	■■■□□ 2.8
RPS2-213	ENST00000533161	AFDN	P55196	1824 aa	Known RBP	32.57	■■■□□ 2.8
RPS2-213	ENST00000533161	FCHSD2	O94868	740 aa		32.57	■■■□□ 2.8
RPS2-213	ENST00000533161	SULT6B1	Q6IMI4	303 aa		32.57	■■■□□ 2.8
RPS2-213	ENST00000533161	ARHGAP27	Q6ZUM4	889 aa		32.57	■■■□□ 2.8
RPS2-213	ENST00000533161	USP42	Q9H9J4	1324 aa	Known RBP	32.56	■■■□□ 2.8
RPS2-213	ENST00000533161	MRC1	P22897	1456 aa		32.55	■■■□□ 2.8
RPS2-213	ENST00000533161	SRP68	Q9UHB9	627 aa	Known RBP	32.55	■■■□□ 2.8
RPS2-213	ENST00000533161	WDR90	Q96KV7	1748 aa		32.54	■■■□□ 2.8
RPS2-213	ENST00000533161	KCNA3	P22001	575 aa		32.54	■■■□□ 2.8
RPS2-213	ENST00000533161	DLEC1	Q9Y238	1755 aa		32.53	■■■□□ 2.8
RPS2-213	ENST00000533161	IL13	P35225	146 aa		32.52	■■■□□ 2.8
RPS2-213	ENST00000533161	FKBP8	Q14318	412 aa		32.52	■■■□□ 2.8
RPS2-213	ENST00000533161	UBR2	Q8IWV8	1755 aa		32.51	■■■□□ 2.79
RPS2-213	ENST00000533161	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.51	■■■□□ 2.79
RPS2-213	ENST00000533161	TOMM70	O94826	608 aa		32.51	■■■□□ 2.79
RPS2-213	ENST00000533161	DDR1	Q08345	913 aa		32.51	■■■□□ 2.79
RPS2-213	ENST00000533161	NRXN2	Q9P2S2	1712 aa		32.51	■■■□□ 2.79
RPS2-213	ENST00000533161	NMRK2	Q9NPI5	230 aa		32.49	■■■□□ 2.79
RPS2-213	ENST00000533161	PIM2	Q9P1W9	311 aa		32.49	■■■□□ 2.79
RPS2-213	ENST00000533161	KNSTRN	Q9Y448	316 aa		32.49	■■■□□ 2.79
RPS2-213	ENST00000533161	KCP	Q6ZWJ8	1503 aa		32.48	■■■□□ 2.79
RPS2-213	ENST00000533161	APLP1	P51693	650 aa		32.48	■■■□□ 2.79
RPS2-213	ENST00000533161	INTS5	Q6P9B9	1019 aa	Known RBP	32.48	■■■□□ 2.79
RPS2-213	ENST00000533161	AKAP4	Q5JQC9	854 aa		32.46	■■■□□ 2.79
RPS2-213	ENST00000533161	C9orf131	Q5VYM1	1079 aa		32.46	■■■□□ 2.79
RPS2-213	ENST00000533161	DALRD3	Q5D0E6	543 aa	Known RBP	32.45	■■■□□ 2.79
RPS2-213	ENST00000533161	SLC52A2	Q9HAB3	445 aa		32.45	■■■□□ 2.79
RPS2-213	ENST00000533161	POLRMT	O00411	1230 aa	Known RBP	32.44	■■■□□ 2.78
RPS2-213	ENST00000533161	DNAJC10	Q8IXB1	793 aa		32.43	■■■□□ 2.78
RPS2-213	ENST00000533161	SOS1	Q07889	1333 aa	Predicted RBP	32.43	■■■□□ 2.78
RPS2-213	ENST00000533161	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.42	■■■□□ 2.78
RPS2-213	ENST00000533161	TM4SF1	P30408	202 aa		32.41	■■■□□ 2.78
RPS2-213	ENST00000533161	CHRNA5	P30532	468 aa		32.41	■■■□□ 2.78
RPS2-213	ENST00000533161	LGR6	Q9HBX8	967 aa		32.41	■■■□□ 2.78
RPS2-213	ENST00000533161	CCDC88A	Q3V6T2	1871 aa		32.4	■■■□□ 2.78
RPS2-213	ENST00000533161	ZPR1	O75312	459 aa		32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms