RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 TMF1P82094 1093 aa18.47■□□□□ 0.55
CLNS1A-211ENST00000532069 PIM2Q9P1W9 311 aa18.47■□□□□ 0.55
CLNS1A-211ENST00000532069 C4AP0C0L4 1744 aa18.46■□□□□ 0.55
CLNS1A-211ENST00000532069 DPEP1P16444 411 aa18.46■□□□□ 0.55
CLNS1A-211ENST00000532069 PARP3Q9Y6F1 533 aa18.46■□□□□ 0.55
CLNS1A-211ENST00000532069 MAP2P11137 1827 aaKnown RBP18.46■□□□□ 0.55
CLNS1A-211ENST00000532069 VEGFAP15692 232 aaPredicted RBP18.44■□□□□ 0.54
CLNS1A-211ENST00000532069 DALRD3Q5D0E6 543 aaKnown RBP18.44■□□□□ 0.54
CLNS1A-211ENST00000532069 TRAPPC3LQ5T215 181 aa18.44■□□□□ 0.54
CLNS1A-211ENST00000532069 NBPF6Q5VWK0 638 aa18.44■□□□□ 0.54
CLNS1A-211ENST00000532069 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
CLNS1A-211ENST00000532069 NBPF4Q96M43 638 aa18.44■□□□□ 0.54
CLNS1A-211ENST00000532069 RTCBQ9Y3I0 505 aaKnown RBP18.44■□□□□ 0.54
CLNS1A-211ENST00000532069 SBF1O95248 1867 aa18.43■□□□□ 0.54
CLNS1A-211ENST00000532069 A0A1W2PP64 1363 aa18.43■□□□□ 0.54
CLNS1A-211ENST00000532069 DCAF5Q96JK2 942 aa18.43■□□□□ 0.54
CLNS1A-211ENST00000532069 PRDM10Q9NQV6 1147 aa18.43■□□□□ 0.54
CLNS1A-211ENST00000532069 ATP6V1AP38606 617 aa18.42■□□□□ 0.54
CLNS1A-211ENST00000532069 SMIM5Q71RC9 77 aa18.42■□□□□ 0.54
CLNS1A-211ENST00000532069 USHBP1Q8N6Y0 703 aa18.41■□□□□ 0.54
CLNS1A-211ENST00000532069 PIGBQ92521 554 aa18.41■□□□□ 0.54
CLNS1A-211ENST00000532069 SLC12A5Q9H2X9 1139 aa18.41■□□□□ 0.54
CLNS1A-211ENST00000532069 AIDAQ96BJ3 306 aa18.4■□□□□ 0.54
CLNS1A-211ENST00000532069 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
CLNS1A-211ENST00000532069 CYP27B1O15528 508 aa18.39■□□□□ 0.53
CLNS1A-211ENST00000532069 RFC4P35249 363 aa18.39■□□□□ 0.53
CLNS1A-211ENST00000532069 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.53
CLNS1A-211ENST00000532069 GLTPD2A6NH11 291 aa18.37■□□□□ 0.53
CLNS1A-211ENST00000532069 KCNA3P22001 575 aa18.37■□□□□ 0.53
CLNS1A-211ENST00000532069 CREBZFQ9NS37 354 aa18.37■□□□□ 0.53
CLNS1A-211ENST00000532069 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
CLNS1A-211ENST00000532069 CTCFP49711 727 aaPredicted RBP18.36■□□□□ 0.53
CLNS1A-211ENST00000532069 NKX1-1Q15270 411 aaPredicted RBP18.36■□□□□ 0.53
CLNS1A-211ENST00000532069 ZNF831Q5JPB2 1677 aa18.36■□□□□ 0.53
CLNS1A-211ENST00000532069 L3MBTL2Q969R5 705 aa18.36■□□□□ 0.53
CLNS1A-211ENST00000532069 INSRP06213 1382 aa18.35■□□□□ 0.53
CLNS1A-211ENST00000532069 KIF24Q5T7B8 1368 aa18.35■□□□□ 0.53
CLNS1A-211ENST00000532069 LMNB1P20700 586 aa18.35■□□□□ 0.53
CLNS1A-211ENST00000532069 ITPK1Q13572 414 aa18.35■□□□□ 0.53
CLNS1A-211ENST00000532069 GYS1P13807 737 aa18.34■□□□□ 0.53
CLNS1A-211ENST00000532069 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
CLNS1A-211ENST00000532069 FAM161AQ3B820 660 aa18.33■□□□□ 0.52
CLNS1A-211ENST00000532069 DPY19L2Q6NUT2 758 aa18.33■□□□□ 0.52
CLNS1A-211ENST00000532069 ARHGEF1Q92888 912 aaKnown RBP18.33■□□□□ 0.52
CLNS1A-211ENST00000532069 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
CLNS1A-211ENST00000532069 TIAM2Q8IVF5 1701 aa18.32■□□□□ 0.52
CLNS1A-211ENST00000532069 FLT4P35916 1363 aa18.32■□□□□ 0.52
CLNS1A-211ENST00000532069 FOXN1O15353 648 aa18.32■□□□□ 0.52
CLNS1A-211ENST00000532069 RRS1Q15050 365 aaKnown RBP18.32■□□□□ 0.52
CLNS1A-211ENST00000532069 MKRN1Q9UHC7 482 aaKnown RBP18.31■□□□□ 0.52
CLNS1A-211ENST00000532069 ASAP1Q9ULH1 1129 aa18.31■□□□□ 0.52
CLNS1A-211ENST00000532069 CNTNAP4Q9C0A0 1308 aa18.3■□□□□ 0.52
CLNS1A-211ENST00000532069 COL5A3P25940 1745 aaPredicted RBP18.3■□□□□ 0.52
CLNS1A-211ENST00000532069 RPS6KA4O75676 772 aa18.3■□□□□ 0.52
CLNS1A-211ENST00000532069 SLC24A1O60721 1099 aa18.29■□□□□ 0.52
CLNS1A-211ENST00000532069 FBLN1P23142 703 aa18.29■□□□□ 0.52
CLNS1A-211ENST00000532069 MLLT1Q03111 559 aaPredicted RBP18.29■□□□□ 0.52
CLNS1A-211ENST00000532069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.29■□□□□ 0.524e-8■■■□□ 18.4
CLNS1A-211ENST00000532069 CCDC88AQ3V6T2 1871 aa18.29■□□□□ 0.52
CLNS1A-211ENST00000532069 IFNL2Q8IZJ0 200 aa18.28■□□□□ 0.52
CLNS1A-211ENST00000532069 KDRP35968 1356 aa18.28■□□□□ 0.52
CLNS1A-211ENST00000532069 CNTNAP1P78357 1384 aa18.28■□□□□ 0.52
CLNS1A-211ENST00000532069 CARD11Q9BXL7 1154 aa18.27■□□□□ 0.52
CLNS1A-211ENST00000532069 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
CLNS1A-211ENST00000532069 CHRNA5P30532 468 aa18.26■□□□□ 0.51
CLNS1A-211ENST00000532069 RASSF7Q02833 373 aa18.26■□□□□ 0.51
CLNS1A-211ENST00000532069 HSP90AB2PQ58FF8 381 aa18.26■□□□□ 0.51
CLNS1A-211ENST00000532069 CHADLQ6NUI6 762 aa18.26■□□□□ 0.51
CLNS1A-211ENST00000532069 ABHD8Q96I13 439 aa18.26■□□□□ 0.51
CLNS1A-211ENST00000532069 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
CLNS1A-211ENST00000532069 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
CLNS1A-211ENST00000532069 DLEC1Q9Y238 1755 aa18.22■□□□□ 0.51
CLNS1A-211ENST00000532069 KIF20BQ96Q89 1820 aa18.22■□□□□ 0.51
CLNS1A-211ENST00000532069 PHKG2P15735 406 aa18.22■□□□□ 0.51
CLNS1A-211ENST00000532069 LBX1P52954 281 aa18.22■□□□□ 0.51
CLNS1A-211ENST00000532069 USP42Q9H9J4 1324 aaKnown RBP18.22■□□□□ 0.51
CLNS1A-211ENST00000532069 DICER1Q9UPY3 1922 aaKnown RBP18.21■□□□□ 0.51
CLNS1A-211ENST00000532069 TONSLQ96HA7 1378 aa18.21■□□□□ 0.51
CLNS1A-211ENST00000532069 HSP90AB1P08238 724 aaKnown RBP18.21■□□□□ 0.51
CLNS1A-211ENST00000532069 TTLL6Q8N841 843 aa18.21■□□□□ 0.51
CLNS1A-211ENST00000532069 GGNBP2Q9H3C7 697 aa18.21■□□□□ 0.51
CLNS1A-211ENST00000532069 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.51
CLNS1A-211ENST00000532069 ERVV-2B6SEH9 535 aa18.2■□□□□ 0.5
CLNS1A-211ENST00000532069 FYB1O15117 783 aa18.2■□□□□ 0.5
CLNS1A-211ENST00000532069 WBP1LQ9NX94 342 aa18.2■□□□□ 0.5
CLNS1A-211ENST00000532069 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
CLNS1A-211ENST00000532069 RGS19P49795 217 aa18.19■□□□□ 0.5
CLNS1A-211ENST00000532069 DDR1Q08345 913 aa18.19■□□□□ 0.5
CLNS1A-211ENST00000532069 FKBP8Q14318 412 aa18.19■□□□□ 0.5
CLNS1A-211ENST00000532069 IQCA1LA6NCM1 817 aa18.18■□□□□ 0.5
CLNS1A-211ENST00000532069 POTECB2RU33 542 aa18.18■□□□□ 0.5
CLNS1A-211ENST00000532069 POLRMTO00411 1230 aaKnown RBP18.18■□□□□ 0.5
CLNS1A-211ENST00000532069 ZPR1O75312 459 aa18.18■□□□□ 0.5
CLNS1A-211ENST00000532069 MAP2K1Q02750 393 aaPredicted RBP18.18■□□□□ 0.5
CLNS1A-211ENST00000532069 CCDC85CA6NKD9 419 aa18.17■□□□□ 0.5
CLNS1A-211ENST00000532069 TMEM88BA6NKF7 163 aa18.17■□□□□ 0.5
CLNS1A-211ENST00000532069 VEGFBP49765 207 aa18.17■□□□□ 0.5
CLNS1A-211ENST00000532069 ERFEQ4G0M1 354 aa18.17■□□□□ 0.5
CLNS1A-211ENST00000532069 LDHDQ86WU2 507 aa18.16■□□□□ 0.5
CLNS1A-211ENST00000532069 SLC4A9Q96Q91 983 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms