RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PLA2G4EQ3MJ16 856 aa11.41□□□□□ -0.58
PTPRK-220ENST00000531466 ZSCAN10Q96SZ4 725 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-220ENST00000531466 APBB1O00213 710 aa11.39□□□□□ -0.59
PTPRK-220ENST00000531466 OIP5O43482 229 aa11.39□□□□□ -0.59
PTPRK-220ENST00000531466 OXCT2Q9BYC2 517 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-220ENST00000531466 GNASQ5JWF2 1037 aa11.38□□□□□ -0.59
PTPRK-220ENST00000531466 HRH3Q9Y5N1 445 aa11.38□□□□□ -0.59
PTPRK-220ENST00000531466 A0A1B0GTH6 734 aa11.37□□□□□ -0.59
PTPRK-220ENST00000531466 MSTNO14793 375 aa11.37□□□□□ -0.59
PTPRK-220ENST00000531466 ITGB2P05107 769 aa11.37□□□□□ -0.59
PTPRK-220ENST00000531466 MAP2K3P46734 347 aa11.37□□□□□ -0.59
PTPRK-220ENST00000531466 TMEM214Q6NUQ4 689 aaKnown RBP11.37□□□□□ -0.59
PTPRK-220ENST00000531466 XAGE2Q96GT9 111 aa11.37□□□□□ -0.59
PTPRK-220ENST00000531466 CFHR5Q9BXR6 569 aa11.37□□□□□ -0.59
PTPRK-220ENST00000531466 FHDC1Q9C0D6 1143 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-220ENST00000531466 RUBCNLQ9H714 662 aa11.37□□□□□ -0.59
PTPRK-220ENST00000531466 LRRC4BQ9NT99 713 aa11.37□□□□□ -0.59
PTPRK-220ENST00000531466 STAU1O95793 577 aaKnown RBP11.36□□□□□ -0.59
PTPRK-220ENST00000531466 GTF2E1P29083 439 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-220ENST00000531466 TSGA10IPQ3SY00 556 aa11.36□□□□□ -0.59
PTPRK-220ENST00000531466 C4orf17Q53FE4 359 aa11.36□□□□□ -0.59
PTPRK-220ENST00000531466 SPOCK3Q9BQ16 436 aa11.36□□□□□ -0.59
PTPRK-220ENST00000531466 SHISA8B8ZZ34 492 aa11.35□□□□□ -0.59
PTPRK-220ENST00000531466 SNRPNP63162 240 aaKnown RBP11.35□□□□□ -0.59
PTPRK-220ENST00000531466 TBC1D2BQ9UPU7 963 aa11.35□□□□□ -0.59
PTPRK-220ENST00000531466 KLRG1Q96E93 195 aa11.34□□□□□ -0.59
PTPRK-220ENST00000531466 PHF24Q9UPV7 400 aa11.34□□□□□ -0.59
PTPRK-220ENST00000531466 CSB-PGBD3P0DP91 1061 aa11.33□□□□□ -0.6
PTPRK-220ENST00000531466 MSX1P28360 303 aa11.33□□□□□ -0.6
PTPRK-220ENST00000531466 UBAP2LQ14157 1087 aaKnown RBP11.33□□□□□ -0.6
PTPRK-220ENST00000531466 ESCO1Q5FWF5 840 aa11.33□□□□□ -0.6
PTPRK-220ENST00000531466 C1orf229Q6ZS94 237 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-220ENST00000531466 PGBD3Q8N328 593 aa11.33□□□□□ -0.6
PTPRK-220ENST00000531466 DOLKQ9UPQ8 538 aa11.33□□□□□ -0.6
PTPRK-220ENST00000531466 GALNT6Q8NCL4 622 aa11.32□□□□□ -0.6
PTPRK-220ENST00000531466 ETNK1Q9HBU6 452 aa11.31□□□□□ -0.6
PTPRK-220ENST00000531466 PROCP04070 461 aa11.3□□□□□ -0.6
PTPRK-220ENST00000531466 EIF4G2P78344 907 aaKnown RBP eCLIP11.3□□□□□ -0.6
PTPRK-220ENST00000531466 OXLD1Q5BKU9 147 aa11.3□□□□□ -0.6
PTPRK-220ENST00000531466 ABHD17AQ96GS6 310 aa11.3□□□□□ -0.6
PTPRK-220ENST00000531466 RRAGCQ9HB90 399 aa11.3□□□□□ -0.6
PTPRK-220ENST00000531466 USP4Q13107 963 aa11.29□□□□□ -0.6
PTPRK-220ENST00000531466 LBRQ14739 615 aaKnown RBP11.29□□□□□ -0.6
PTPRK-220ENST00000531466 TLR1Q15399 786 aa11.29□□□□□ -0.6
PTPRK-220ENST00000531466 SLFNL1Q499Z3 407 aa11.29□□□□□ -0.6
PTPRK-220ENST00000531466 EFHC2Q5JST6 749 aa11.29□□□□□ -0.6
PTPRK-220ENST00000531466 PHTF2Q8N3S3 785 aa11.29□□□□□ -0.6
PTPRK-220ENST00000531466 RHBDD1Q8TEB9 315 aa11.29□□□□□ -0.6
PTPRK-220ENST00000531466 BMP4P12644 408 aa11.28□□□□□ -0.6
PTPRK-220ENST00000531466 IRF5Q13568 498 aa11.28□□□□□ -0.6
PTPRK-220ENST00000531466 RNF135Q8IUD6 432 aa11.28□□□□□ -0.6
PTPRK-220ENST00000531466 EDARADDQ8WWZ3 215 aa11.28□□□□□ -0.6
PTPRK-220ENST00000531466 GDF2Q9UK05 429 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-220ENST00000531466 ATXN7L1Q9ULK2 861 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-220ENST00000531466 C2CD2LO14523 706 aa11.27□□□□□ -0.61
PTPRK-220ENST00000531466 ADAM23O75077 832 aa11.27□□□□□ -0.61
PTPRK-220ENST00000531466 PPARGC1BQ86YN6 1023 aaKnown RBP11.27□□□□□ -0.61
PTPRK-220ENST00000531466 MKL2Q9ULH7 1088 aa11.27□□□□□ -0.61
PTPRK-220ENST00000531466 BNIP3LO60238 219 aa11.26□□□□□ -0.61
PTPRK-220ENST00000531466 PLA2G4AP47712 749 aa11.26□□□□□ -0.61
PTPRK-220ENST00000531466 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
PTPRK-220ENST00000531466 KRBA1A5PL33 1030 aa11.25□□□□□ -0.61
PTPRK-220ENST00000531466 FGFR3P22607 806 aa11.25□□□□□ -0.61
PTPRK-220ENST00000531466 CTBSQ01459 385 aa11.25□□□□□ -0.61
PTPRK-220ENST00000531466 AMPD1P23109 780 aa11.24□□□□□ -0.61
PTPRK-220ENST00000531466 VAC14Q08AM6 782 aa11.24□□□□□ -0.61
PTPRK-220ENST00000531466 PRM3Q9NNZ6 103 aa11.24□□□□□ -0.61
PTPRK-220ENST00000531466 NDFIP2Q9NV92 336 aa11.24□□□□□ -0.61
PTPRK-220ENST00000531466 GGA1Q9UJY5 639 aa11.24□□□□□ -0.61
PTPRK-220ENST00000531466 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
PTPRK-220ENST00000531466 COL8A1P27658 744 aa11.23□□□□□ -0.61
PTPRK-220ENST00000531466 TBC1D9Q6ZT07 1266 aa11.23□□□□□ -0.61
PTPRK-220ENST00000531466 CRISPLD1Q9H336 500 aa11.23□□□□□ -0.61
PTPRK-220ENST00000531466 SCNN1DP51172 638 aa11.22□□□□□ -0.61
PTPRK-220ENST00000531466 SLCO4C1Q6ZQN7 724 aa11.22□□□□□ -0.61
PTPRK-220ENST00000531466 GDF10P55107 478 aa11.21□□□□□ -0.61
PTPRK-220ENST00000531466 SIRT1Q96EB6 747 aa11.21□□□□□ -0.61
PTPRK-220ENST00000531466 CHIC2Q9UKJ5 165 aa11.21□□□□□ -0.61
PTPRK-220ENST00000531466 INHAP05111 366 aa11.2□□□□□ -0.62
PTPRK-220ENST00000531466 GRIN2CQ14957 1233 aa11.2□□□□□ -0.62
PTPRK-220ENST00000531466 AIDAQ96BJ3 306 aa11.2□□□□□ -0.62
PTPRK-220ENST00000531466 SUV39H2Q9H5I1 410 aa11.2□□□□□ -0.62
PTPRK-220ENST00000531466 DNAAF2Q9NVR5 837 aaKnown RBP11.2□□□□□ -0.62
PTPRK-220ENST00000531466 HOXB4P17483 251 aaPredicted RBP11.19□□□□□ -0.62
PTPRK-220ENST00000531466 ATP4AP20648 1035 aa11.19□□□□□ -0.62
PTPRK-220ENST00000531466 LINC00114Q6XXX2 140 aa11.19□□□□□ -0.62
PTPRK-220ENST00000531466 GDPD2Q9HCC8 539 aa11.19□□□□□ -0.62
PTPRK-220ENST00000531466 ABL2P42684 1182 aa11.18□□□□□ -0.62
PTPRK-220ENST00000531466 FIGNL1Q6PIW4 674 aa11.18□□□□□ -0.62
PTPRK-220ENST00000531466 ZCCHC2Q9C0B9 1178 aaKnown RBP11.18□□□□□ -0.62
PTPRK-220ENST00000531466 PCDHGC4Q9Y5F7 938 aa11.18□□□□□ -0.62
PTPRK-220ENST00000531466 BAG6P46379 1132 aa11.17□□□□□ -0.62
PTPRK-220ENST00000531466 NIFKQ9BYG3 293 aaKnown RBP11.17□□□□□ -0.62
PTPRK-220ENST00000531466 SERTAD1Q9UHV2 236 aa11.17□□□□□ -0.62
PTPRK-220ENST00000531466 NEURL1BA8MQ27 555 aa11.16□□□□□ -0.62
PTPRK-220ENST00000531466 K7ELQ4 463 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-220ENST00000531466 EPXP11678 715 aa11.16□□□□□ -0.62
PTPRK-220ENST00000531466 SMTNP53814 917 aa11.16□□□□□ -0.62
PTPRK-220ENST00000531466 PLPP7Q8NBV4 271 aa11.16□□□□□ -0.62
PTPRK-220ENST00000531466 BTBD6Q96KE9 485 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms